BLASTX nr result

ID: Panax21_contig00017164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017164
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279098.1| PREDICTED: F-box protein At5g39250 isoform 3...   410   e-112
gb|ABB29946.1| F-box family protein-like [Solanum tuberosum]          408   e-112
ref|XP_002526106.1| conserved hypothetical protein [Ricinus comm...   398   e-109
ref|XP_002306068.1| predicted protein [Populus trichocarpa] gi|2...   390   e-106
emb|CAN69611.1| hypothetical protein VITISV_043871 [Vitis vinifera]   387   e-105

>ref|XP_002279098.1| PREDICTED: F-box protein At5g39250 isoform 3 [Vitis vinifera]
           gi|225451701|ref|XP_002279074.1| PREDICTED: F-box
           protein At5g39250 isoform 2 [Vitis vinifera]
           gi|225451703|ref|XP_002279063.1| PREDICTED: F-box
           protein At5g39250 isoform 1 [Vitis vinifera]
           gi|296082222|emb|CBI21227.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  410 bits (1053), Expect = e-112
 Identities = 192/231 (83%), Positives = 208/231 (90%)
 Frame = +3

Query: 3   LASCMEVCKQWRDIAQDDYFWKCLCAKRWPSTCKQPSPPTVTYYKLFQTFYKRQHRKTLL 182
           LASCM VCKQWRDIAQDDYFWKC+CAKRWPS CK+PSPPTVTYYKL QTFYKRQH + L 
Sbjct: 19  LASCMLVCKQWRDIAQDDYFWKCVCAKRWPSICKRPSPPTVTYYKLCQTFYKRQHCRALP 78

Query: 183 PPRLSFNELEFYIDIWSEESLIFSEVVAGLVLQKGTWIPPPGICDVLRFHLEGPEYKMTF 362
           PPRLSFN+LEFYIDIW+ E  IFSEVV G VLQ G  +PPPGICD+LRFHLEGPEYKMT 
Sbjct: 79  PPRLSFNDLEFYIDIWTGERSIFSEVVPGPVLQTGIVVPPPGICDMLRFHLEGPEYKMTL 138

Query: 363 PVDPRFSVPLSQTVSVSMLVGRKDSNKVACIINKSVFDYIDRTAYRALAFDYLDFSPSYP 542
            V+PRF+VPL  TVSVS+LVGRKDS KVACIINKS+FDYIDRTAYRALAFDYLDFSP YP
Sbjct: 139 LVEPRFTVPLMATVSVSVLVGRKDSKKVACIINKSMFDYIDRTAYRALAFDYLDFSPIYP 198

Query: 543 FVSGIRGWISLLFMDHGSEGVIDVFGIEMDFCDAANSEDEVLWLLDMLDWK 695
           F+SGIR WISLLFM+ G+EGVI+VFG+EMDFCDAANSE EVLWLLDMLDWK
Sbjct: 199 FISGIRAWISLLFMEDGNEGVINVFGLEMDFCDAANSEPEVLWLLDMLDWK 249


>gb|ABB29946.1| F-box family protein-like [Solanum tuberosum]
          Length = 250

 Score =  408 bits (1048), Expect = e-112
 Identities = 185/232 (79%), Positives = 213/232 (91%), Gaps = 1/232 (0%)
 Frame = +3

Query: 3   LASCMEVCKQWRDIAQDDYFWKCLCAKRWPSTCKQPSPPTVTYYKLFQTFYKRQHRKTLL 182
           LA+CM VCKQWRDIA+DDYFWKCLC+K+WPS CK+ SPPTVTYY LFQ F++R +R+T+L
Sbjct: 19  LATCMLVCKQWRDIARDDYFWKCLCSKKWPSICKRSSPPTVTYYNLFQNFHRRPYRRTVL 78

Query: 183 PPRLSFNELEFYIDIWSEESLIFSEVVAGLVLQKGTWIPPPGICDVLRFHLEGPEYKMTF 362
           PP+LSF++LEFYIDIW+EE +IFS+VV G VLQKG WIPPPGICDVL+FHLEGPEYKMT 
Sbjct: 79  PPKLSFSDLEFYIDIWTEEKIIFSDVVPGPVLQKGIWIPPPGICDVLKFHLEGPEYKMTL 138

Query: 363 PVDPRFSVPLSQTVSVSMLVGRKDSNKVACIINKSVFDYIDRTAYRALAFDYLDF-SPSY 539
           PV+PRF++PL QTVSVS+LVGRKD+NKVACII KS+FDYIDRTAYRALA+DYLDF SP  
Sbjct: 139 PVEPRFTIPLCQTVSVSVLVGRKDTNKVACIIKKSLFDYIDRTAYRALAYDYLDFSSPMC 198

Query: 540 PFVSGIRGWISLLFMDHGSEGVIDVFGIEMDFCDAANSEDEVLWLLDMLDWK 695
            FVSG+R WISLLFMDHG+EG +DVFGIEMDFCDAANSEDEVLWLLDML+WK
Sbjct: 199 LFVSGVRAWISLLFMDHGNEGALDVFGIEMDFCDAANSEDEVLWLLDMLEWK 250


>ref|XP_002526106.1| conserved hypothetical protein [Ricinus communis]
           gi|223534603|gb|EEF36300.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 249

 Score =  398 bits (1022), Expect = e-109
 Identities = 184/231 (79%), Positives = 210/231 (90%)
 Frame = +3

Query: 3   LASCMEVCKQWRDIAQDDYFWKCLCAKRWPSTCKQPSPPTVTYYKLFQTFYKRQHRKTLL 182
           LASCM V KQWRD A+DDYFWKCLCAKRWPS CK+P+PPTVTY KL+QTFYKRQ+R+TLL
Sbjct: 19  LASCMVVSKQWRDTARDDYFWKCLCAKRWPSICKRPNPPTVTYCKLYQTFYKRQNRQTLL 78

Query: 183 PPRLSFNELEFYIDIWSEESLIFSEVVAGLVLQKGTWIPPPGICDVLRFHLEGPEYKMTF 362
           PPRLSF++LEF+IDIWSEE LIFSEVV G VL  G  +PPPGICD+LRFHLEGP+YKMT 
Sbjct: 79  PPRLSFDDLEFFIDIWSEEKLIFSEVVPGPVLLGGIKVPPPGICDILRFHLEGPDYKMTL 138

Query: 363 PVDPRFSVPLSQTVSVSMLVGRKDSNKVACIINKSVFDYIDRTAYRALAFDYLDFSPSYP 542
           PV+PR  +PLSQTVSVS+LVGRKD+NKVA +IN+SVFDYIDRTAYR++AF+YLDFSP++P
Sbjct: 139 PVEPRVKIPLSQTVSVSVLVGRKDTNKVARVINRSVFDYIDRTAYRSMAFEYLDFSPAHP 198

Query: 543 FVSGIRGWISLLFMDHGSEGVIDVFGIEMDFCDAANSEDEVLWLLDMLDWK 695
           FV GIR WISLLFM+ G+EGVIDVFGIEMDF DAANS +EVLWLLDMLDWK
Sbjct: 199 FVPGIRAWISLLFMEDGNEGVIDVFGIEMDFRDAANSREEVLWLLDMLDWK 249


>ref|XP_002306068.1| predicted protein [Populus trichocarpa] gi|222849032|gb|EEE86579.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  390 bits (1002), Expect = e-106
 Identities = 180/231 (77%), Positives = 202/231 (87%)
 Frame = +3

Query: 3   LASCMEVCKQWRDIAQDDYFWKCLCAKRWPSTCKQPSPPTVTYYKLFQTFYKRQHRKTLL 182
           LASCM VCKQWRD+AQDDYFWKC+CAKRWPS CK+  PPTVTYYKL+QTFYKRQHR+ LL
Sbjct: 19  LASCMAVCKQWRDMAQDDYFWKCVCAKRWPSICKRSDPPTVTYYKLYQTFYKRQHRQILL 78

Query: 183 PPRLSFNELEFYIDIWSEESLIFSEVVAGLVLQKGTWIPPPGICDVLRFHLEGPEYKMTF 362
           PPRLSF+ LEF+IDIW+++ LIFSEVV G VL  G   PPPGICD LRF LEGP+ KMT 
Sbjct: 79  PPRLSFDNLEFFIDIWTDDKLIFSEVVPGPVLHTGIKSPPPGICDRLRFQLEGPDCKMTL 138

Query: 363 PVDPRFSVPLSQTVSVSMLVGRKDSNKVACIINKSVFDYIDRTAYRALAFDYLDFSPSYP 542
           PV+PRF VPL +TVSVS+LVGRKDSN+VACIINKSVFDYIDRT+YRA+AFDYL  SP++P
Sbjct: 139 PVEPRFKVPLGETVSVSVLVGRKDSNRVACIINKSVFDYIDRTSYRAMAFDYLGLSPAHP 198

Query: 543 FVSGIRGWISLLFMDHGSEGVIDVFGIEMDFCDAANSEDEVLWLLDMLDWK 695
           FV GIR WISLLFMD  ++ VIDVFGIEMDFCDAA S DEVLWLLD+LDWK
Sbjct: 199 FVPGIRAWISLLFMDDRNDSVIDVFGIEMDFCDAAKSRDEVLWLLDILDWK 249


>emb|CAN69611.1| hypothetical protein VITISV_043871 [Vitis vinifera]
          Length = 239

 Score =  387 bits (995), Expect = e-105
 Identities = 185/231 (80%), Positives = 200/231 (86%)
 Frame = +3

Query: 3   LASCMEVCKQWRDIAQDDYFWKCLCAKRWPSTCKQPSPPTVTYYKLFQTFYKRQHRKTLL 182
           LASCM VCKQWRDIAQDDYFWKC+CAKRWPS CK+PSPPTVTYYKL QTFYK        
Sbjct: 19  LASCMLVCKQWRDIAQDDYFWKCVCAKRWPSICKRPSPPTVTYYKLCQTFYKH------- 71

Query: 183 PPRLSFNELEFYIDIWSEESLIFSEVVAGLVLQKGTWIPPPGICDVLRFHLEGPEYKMTF 362
              LSFN+LEFYIDIW+ E  IFSEVV G VLQ G  +PPPGICD+LRFHLEGPEYKMT 
Sbjct: 72  ---LSFNDLEFYIDIWTGERSIFSEVVPGPVLQTGIVVPPPGICDMLRFHLEGPEYKMTL 128

Query: 363 PVDPRFSVPLSQTVSVSMLVGRKDSNKVACIINKSVFDYIDRTAYRALAFDYLDFSPSYP 542
            V+PRF+VPL  TVSVS+LVGRKDS KVACIINKS+FDYIDRTAYRALAFDYLDFSP YP
Sbjct: 129 LVEPRFTVPLMATVSVSVLVGRKDSKKVACIINKSMFDYIDRTAYRALAFDYLDFSPIYP 188

Query: 543 FVSGIRGWISLLFMDHGSEGVIDVFGIEMDFCDAANSEDEVLWLLDMLDWK 695
           F+SGIR WISLLFM+ G+EGVI+VFG+EMDFCDAANSE EVLWLLDMLDWK
Sbjct: 189 FISGIRAWISLLFMEDGNEGVINVFGLEMDFCDAANSEPEVLWLLDMLDWK 239


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