BLASTX nr result

ID: Panax21_contig00017152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017152
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21155.3| unnamed protein product [Vitis vinifera]              455   e-125
ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|2...   453   e-125
ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-co...   451   e-124
ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-co...   449   e-124
ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124

>emb|CBI21155.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score =  455 bits (1170), Expect = e-125
 Identities = 232/331 (70%), Positives = 243/331 (73%), Gaps = 1/331 (0%)
 Frame = +1

Query: 73   TPFQXXXXXXXXXXXXXXXXTARLYAEFVESFQDDSTPGSKAFVRGGTINSNEKLKTDSE 252
            TPFQ                TARLYAEFVESFQ D+ PGSK FVRGGTIN NE++KT+SE
Sbjct: 11   TPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNERVKTESE 70

Query: 253  XXXXXXXXXXXXXXXRYVPSFIPPPMATXXXXXXXXXXXXXXXXXXXXXSRNIDHFMEEL 432
                           RYVPSFIPPP+A                      SRNIDHFMEEL
Sbjct: 71   GEKSKDGVSVPKKGSRYVPSFIPPPLAAKGKEPDKKKEEEKPKEREKGKSRNIDHFMEEL 130

Query: 433  KHXXXXXXXXXXXXXHWRDSRHSDNSAPSSRFDELPDDFDPSGK-PGSFDDGDPQTTNLY 609
            KH              WRD RH+D+SA  SRFDELPDDFDPSGK PGSFDDGDPQTTNLY
Sbjct: 131  KHEQEMRERRNQERDQWRDGRHNDSSALPSRFDELPDDFDPSGKLPGSFDDGDPQTTNLY 190

Query: 610  VGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDE 789
            VGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDE
Sbjct: 191  VGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDE 250

Query: 790  MQGVIVYEYELKIGWGKSVXXXXXXXXXXXXGHMAIRSKEGATVILSGPSGPPVTSIPSQ 969
            MQGV+VYEYELKIGWGKSV            GHMAIRSKEGATVILSGPSGPPVTS+P+Q
Sbjct: 251  MQGVVVYEYELKIGWGKSVSLPSQALPAPPPGHMAIRSKEGATVILSGPSGPPVTSVPNQ 310

Query: 970  NSELVLTPNVPDITVAPPEDDHLHHVIDTMA 1062
            NSELVLTPNVPDI V+PPEDDHLHHVIDTMA
Sbjct: 311  NSELVLTPNVPDIMVSPPEDDHLHHVIDTMA 341


>ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|222865775|gb|EEF02906.1|
            predicted protein [Populus trichocarpa]
          Length = 955

 Score =  453 bits (1165), Expect = e-125
 Identities = 231/331 (69%), Positives = 243/331 (73%), Gaps = 1/331 (0%)
 Frame = +1

Query: 73   TPFQXXXXXXXXXXXXXXXXTARLYAEFVESFQDDSTPGSKAFVRGGTINSNEKLKTDSE 252
            TPFQ                TARLYAEFVESFQ D+ PGSK FVRGGTIN NEKLK DS+
Sbjct: 11   TPFQKHREEEEARKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNEKLKIDSK 70

Query: 253  XXXXXXXXXXXXXXXRYVPSFIPPPMATXXXXXXXXXXXXXXXXXXXXXSRNIDHFMEEL 432
                           RYVPSFIPPPMA+                     +RNIDHFMEEL
Sbjct: 71   GEKSKDGVSVPKKGSRYVPSFIPPPMASKGKELEKKREEERPKEKEKGKTRNIDHFMEEL 130

Query: 433  KHXXXXXXXXXXXXXHWRDSRHSDNSAPSSRFDELPDDFDPSGK-PGSFDDGDPQTTNLY 609
            KH             HWR+ RH+++SAPSSRFDELPDDFDPSGK PGSFDD DPQTTNLY
Sbjct: 131  KHEHEMRERRNQEREHWREGRHNESSAPSSRFDELPDDFDPSGKLPGSFDDVDPQTTNLY 190

Query: 610  VGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDE 789
            VGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNR DGQAAKDE
Sbjct: 191  VGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRVDGQAAKDE 250

Query: 790  MQGVIVYEYELKIGWGKSVXXXXXXXXXXXXGHMAIRSKEGATVILSGPSGPPVTSIPSQ 969
            MQGV+VYEYELKIGWGKSV            G MAIRSKEGATVILSGPSGPPVTS+P+Q
Sbjct: 251  MQGVVVYEYELKIGWGKSVALPSQALPAPPPGQMAIRSKEGATVILSGPSGPPVTSVPNQ 310

Query: 970  NSELVLTPNVPDITVAPPEDDHLHHVIDTMA 1062
            NSELVLTPNVPDI VAPPEDDHLHH+IDTMA
Sbjct: 311  NSELVLTPNVPDIMVAPPEDDHLHHMIDTMA 341


>ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
            [Glycine max]
          Length = 972

 Score =  451 bits (1160), Expect = e-124
 Identities = 230/331 (69%), Positives = 242/331 (73%), Gaps = 1/331 (0%)
 Frame = +1

Query: 73   TPFQXXXXXXXXXXXXXXXXTARLYAEFVESFQDDSTPGSKAFVRGGTINSNEKLKTDSE 252
            TPFQ                TARLYAEFVESFQ D+TPGSK FVRGGTIN N+K K DSE
Sbjct: 11   TPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDTTPGSKTFVRGGTINPNDKFKDDSE 70

Query: 253  XXXXXXXXXXXXXXXRYVPSFIPPPMATXXXXXXXXXXXXXXXXXXXXXSRNIDHFMEEL 432
                           RYVPSFIPPPMAT                     +RNIDHFMEEL
Sbjct: 71   GEKSKDGVSGPKKGSRYVPSFIPPPMATKGKESERKKEEEKLKEKEKGKARNIDHFMEEL 130

Query: 433  KHXXXXXXXXXXXXXHWRDSRHSDNSAPSSRFDELPDDFDPSGK-PGSFDDGDPQTTNLY 609
            KH             HWRD R +++S PSSRFDELPDDFDPSGK PGSFDDGDPQTTNLY
Sbjct: 131  KHEQEMRERRNQEREHWRDGRLTEHSIPSSRFDELPDDFDPSGKLPGSFDDGDPQTTNLY 190

Query: 610  VGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDE 789
            VGNLSP+VDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDE
Sbjct: 191  VGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDE 250

Query: 790  MQGVIVYEYELKIGWGKSVXXXXXXXXXXXXGHMAIRSKEGATVILSGPSGPPVTSIPSQ 969
            MQGV+VYEYELKIGWGKSV            GHMAIRSKEG+TVILSGPSGPPVTS+P+Q
Sbjct: 251  MQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGSTVILSGPSGPPVTSVPNQ 310

Query: 970  NSELVLTPNVPDITVAPPEDDHLHHVIDTMA 1062
            NSELVLTPNVPDI V PPED+HL HVIDTMA
Sbjct: 311  NSELVLTPNVPDIMVTPPEDEHLRHVIDTMA 341


>ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
            [Glycine max]
          Length = 971

 Score =  449 bits (1156), Expect = e-124
 Identities = 231/331 (69%), Positives = 242/331 (73%), Gaps = 1/331 (0%)
 Frame = +1

Query: 73   TPFQXXXXXXXXXXXXXXXXTARLYAEFVESFQDDSTPGSKAFVRGGTINSNEKLKTDSE 252
            TPFQ                TARLYAEFVESFQ D+TPGSK FVRGGTIN N+K K DSE
Sbjct: 11   TPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDTTPGSKTFVRGGTINPNDKFKDDSE 70

Query: 253  XXXXXXXXXXXXXXXRYVPSFIPPPMATXXXXXXXXXXXXXXXXXXXXXSRNIDHFMEEL 432
                           RYVPSFIPPPMAT                     SRNIDHFMEEL
Sbjct: 71   GEKSKDGVSGPKKGSRYVPSFIPPPMATKGKESERKKEEEKPKEKEKGKSRNIDHFMEEL 130

Query: 433  KHXXXXXXXXXXXXXHWRDSRHSDNSAPSSRFDELPDDFDPSGK-PGSFDDGDPQTTNLY 609
            KH             HWRD RH+++S  SSRFDELPDDFDPSGK PGSFDDGDPQTTNLY
Sbjct: 131  KHEQEMRERRNQEREHWRDGRHTEHSI-SSRFDELPDDFDPSGKLPGSFDDGDPQTTNLY 189

Query: 610  VGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDE 789
            VGNLSP+VDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDE
Sbjct: 190  VGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDE 249

Query: 790  MQGVIVYEYELKIGWGKSVXXXXXXXXXXXXGHMAIRSKEGATVILSGPSGPPVTSIPSQ 969
            MQGV+VYEYELKIGWGKSV            GHMAIRSKEG+TVILSGPSGPPVT++P+Q
Sbjct: 250  MQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGSTVILSGPSGPPVTTVPNQ 309

Query: 970  NSELVLTPNVPDITVAPPEDDHLHHVIDTMA 1062
            NSELVLTPNVPDI V PPEDDHL HVIDTMA
Sbjct: 310  NSELVLTPNVPDIMVTPPEDDHLRHVIDTMA 340


>ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|222854690|gb|EEE92237.1|
            predicted protein [Populus trichocarpa]
          Length = 988

 Score =  449 bits (1154), Expect = e-124
 Identities = 234/341 (68%), Positives = 244/341 (71%), Gaps = 11/341 (3%)
 Frame = +1

Query: 73   TPFQXXXXXXXXXXXXXXXXTARLYAEFVESFQDDSTPGSKAFVRGGTINSNEKLKTDSE 252
            TPFQ                TARLYAEFVESFQ D+ PGSK FVRGGTIN NEKLK+D+E
Sbjct: 11   TPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNEKLKSDAE 70

Query: 253  XXXXXXXXXXXXXXXRYVPSFIPPPMATXXXXXXXXXXXXXXXXXXXXXSRNIDHFMEEL 432
                           RYVPSFIPPPMA                      +RNIDHFMEEL
Sbjct: 71   GEKSKDGVSVPKKGSRYVPSFIPPPMAPKGKEPERKREEERPKEKEKGKTRNIDHFMEEL 130

Query: 433  KHXXXXXXXXXXXXXHWRDSRHSDNSAPSSRFDELPDDFDPSGK-PGSFDDGDPQTTNLY 609
            KH             HWR+ RH+++SAPSSRFDELPDDFDPSGK PGSFDDGDPQTTNLY
Sbjct: 131  KHEHEMRERRNQEREHWREGRHTESSAPSSRFDELPDDFDPSGKLPGSFDDGDPQTTNLY 190

Query: 610  VGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDE 789
            VGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDE
Sbjct: 191  VGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDE 250

Query: 790  MQGVIVYEYELKIGWGKSVXXXXXXXXXXXXGHMAIRSKE----------GATVILSGPS 939
            MQGVIVYEYELKIGWGKSV            G MAIRSKE          GATVILSGPS
Sbjct: 251  MQGVIVYEYELKIGWGKSVALPSQALPAPPPGQMAIRSKEVCYGFLPKPIGATVILSGPS 310

Query: 940  GPPVTSIPSQNSELVLTPNVPDITVAPPEDDHLHHVIDTMA 1062
            GPPVTS+P+QNSELVLTPNVPDI VAPPEDDHL HVIDTMA
Sbjct: 311  GPPVTSVPNQNSELVLTPNVPDIMVAPPEDDHLRHVIDTMA 351


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