BLASTX nr result

ID: Panax21_contig00017125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017125
         (1273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Viti...   344   3e-92
ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arab...   340   4e-91
ref|XP_004135561.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...   338   2e-90
ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana...   336   7e-90
ref|XP_002529901.1| UDP-glucose 4-epimerase, putative [Ricinus c...   335   1e-89

>ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Vitis vinifera]
           gi|297740899|emb|CBI31081.3| unnamed protein product
           [Vitis vinifera]
          Length = 418

 Score =  344 bits (882), Expect = 3e-92
 Identities = 170/191 (89%), Positives = 181/191 (94%)
 Frame = +3

Query: 9   GGMDYVDPKKKSNFIGKILLAAVLTALCILVLKQSPSFNSPSAFSRHEAGITHVLVTGGA 188
           GGM+Y DPK+KSN +GKILLAA LTALCIL+LKQS +FN+PS FSRHE G+THVLVTGGA
Sbjct: 20  GGMEYADPKRKSNVVGKILLAATLTALCILMLKQSSNFNTPSPFSRHEPGVTHVLVTGGA 79

Query: 189 GYIGSHAALRLLKDLYRVTIVDNLSRGNLGAIKVLQNLFPEPGRLQFIYADLGDAKAVNK 368
           GYIGSHAALRLLKD +RVTIVDNLSRGNLGAIKVLQ  FPEPGRLQFIYADLGDAKAVNK
Sbjct: 80  GYIGSHAALRLLKDSHRVTIVDNLSRGNLGAIKVLQEQFPEPGRLQFIYADLGDAKAVNK 139

Query: 369 IFSENAFDAVIHFAAVAYVGESTLDPLKYYHNITSNTLVVLEAMAAHGVTTLIYSSTCAT 548
           IFSENAFDAV+HFAAVAYVGESTL+PL+YYHNITSNTLVVLEAMAAHGV TLIYSSTCAT
Sbjct: 140 IFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHGVNTLIYSSTCAT 199

Query: 549 YGEPEKMPITE 581
           YGEPEKMPITE
Sbjct: 200 YGEPEKMPITE 210



 Score =  333 bits (854), Expect = 6e-89
 Identities = 158/180 (87%), Positives = 170/180 (94%)
 Frame = +2

Query: 725  ILDFHKNSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIPGLKV 904
            ILDF KNS MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAA G+IPGLKV
Sbjct: 231  ILDFSKNSEMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAASGVIPGLKV 290

Query: 905  RGTDYKTADGTCIRDYIDVTDLVDAHVKALEKAEPRKVGIYNVGTGRGRSVKEFVEACKK 1084
            +GTDYKT DGTC+RDYIDVTDLVDAHVKAL KA P KVGIYNVGTG+GRSVKEFVEACKK
Sbjct: 291  KGTDYKTPDGTCVRDYIDVTDLVDAHVKALNKAAPGKVGIYNVGTGKGRSVKEFVEACKK 350

Query: 1085 ATGVSIKVDFLARRPGDYAEVLADPTKIFRELNWTAQYTDLQESLQVAWRWQKSHRNGYG 1264
            ATGV+IKV++LARRPGDYAEV +DP+KI  ELNWTA+YTDLQESL+VAWRWQK+HRNGYG
Sbjct: 351  ATGVNIKVEYLARRPGDYAEVFSDPSKIDHELNWTAKYTDLQESLRVAWRWQKAHRNGYG 410


>ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arabidopsis lyrata subsp.
           lyrata] gi|297336725|gb|EFH67142.1| hypothetical protein
           ARALYDRAFT_890616 [Arabidopsis lyrata subsp. lyrata]
          Length = 418

 Score =  340 bits (873), Expect = 4e-91
 Identities = 166/193 (86%), Positives = 180/193 (93%)
 Frame = +3

Query: 3   SLGGMDYVDPKKKSNFIGKILLAAVLTALCILVLKQSPSFNSPSAFSRHEAGITHVLVTG 182
           SLGG+DY DPKKK+N++GKILL A LTALCI +LKQSP+FN+PS FSRHE G+THVLVTG
Sbjct: 18  SLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTG 77

Query: 183 GAGYIGSHAALRLLKDLYRVTIVDNLSRGNLGAIKVLQNLFPEPGRLQFIYADLGDAKAV 362
           GAGYIGSHAALRLLK+ YRVTIVDNLSRGNLGA+K+LQ LFPEPGRLQFIYADLGDAKAV
Sbjct: 78  GAGYIGSHAALRLLKESYRVTIVDNLSRGNLGAVKILQELFPEPGRLQFIYADLGDAKAV 137

Query: 363 NKIFSENAFDAVIHFAAVAYVGESTLDPLKYYHNITSNTLVVLEAMAAHGVTTLIYSSTC 542
           NKIF+ENAFDAV+HFAAVAYVGEST  PLKYYHNITSNTLVVLE MAAHGV TLIYSSTC
Sbjct: 138 NKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHGVKTLIYSSTC 197

Query: 543 ATYGEPEKMPITE 581
           ATYGEP+ MPITE
Sbjct: 198 ATYGEPDTMPITE 210



 Score =  326 bits (835), Expect = 9e-87
 Identities = 152/180 (84%), Positives = 171/180 (95%)
 Frame = +2

Query: 725  ILDFHKNSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIPGLKV 904
            ILDF KNSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGI+PGL++
Sbjct: 231  ILDFSKNSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQI 290

Query: 905  RGTDYKTADGTCIRDYIDVTDLVDAHVKALEKAEPRKVGIYNVGTGRGRSVKEFVEACKK 1084
            +GTDYKTADGTC+RDYIDVTDLVDAHVKAL+KA+PRKVGIYNVGTG+G SVKEFVEACKK
Sbjct: 291  KGTDYKTADGTCVRDYIDVTDLVDAHVKALQKAKPRKVGIYNVGTGKGSSVKEFVEACKK 350

Query: 1085 ATGVSIKVDFLARRPGDYAEVLADPTKIFRELNWTAQYTDLQESLQVAWRWQKSHRNGYG 1264
            ATGV IK+++L RR GDYAEV +DP+KI +ELNWTA++T+L+ESL+ AWRWQK HRNGYG
Sbjct: 351  ATGVEIKIEYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLHRNGYG 410


>ref|XP_004135561.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis sativus]
          Length = 417

 Score =  338 bits (867), Expect = 2e-90
 Identities = 164/193 (84%), Positives = 182/193 (94%)
 Frame = +3

Query: 3   SLGGMDYVDPKKKSNFIGKILLAAVLTALCILVLKQSPSFNSPSAFSRHEAGITHVLVTG 182
           S GGMDY DPK+K+NF+GKI+LAA LTA+CI++LKQSP+F++P+ F+ H+ G+THVLVTG
Sbjct: 18  SFGGMDYPDPKRKNNFVGKIILAASLTAICIVMLKQSPNFSTPTPFASHQLGVTHVLVTG 77

Query: 183 GAGYIGSHAALRLLKDLYRVTIVDNLSRGNLGAIKVLQNLFPEPGRLQFIYADLGDAKAV 362
           GAGYIGSHAALRLLKD YRVTIVDNLSRGNLGA+KVLQ LFPE GRLQFIYADLGDAK+V
Sbjct: 78  GAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQELFPEYGRLQFIYADLGDAKSV 137

Query: 363 NKIFSENAFDAVIHFAAVAYVGESTLDPLKYYHNITSNTLVVLEAMAAHGVTTLIYSSTC 542
           NKIFSENAFDAV+HFAAVAYVGESTLDPLKYYHNITSNTL VLE+MAAHGV TLIYSSTC
Sbjct: 138 NKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLTVLESMAAHGVKTLIYSSTC 197

Query: 543 ATYGEPEKMPITE 581
           ATYGEPEKMPITE
Sbjct: 198 ATYGEPEKMPITE 210



 Score =  331 bits (849), Expect = 2e-88
 Identities = 161/180 (89%), Positives = 168/180 (93%)
 Frame = +2

Query: 725  ILDFHKNSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIPGLKV 904
            ILDF KNS MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII GLKV
Sbjct: 231  ILDFSKNSKMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIISGLKV 290

Query: 905  RGTDYKTADGTCIRDYIDVTDLVDAHVKALEKAEPRKVGIYNVGTGRGRSVKEFVEACKK 1084
            +GTDYKT DGTCIRDYIDVTDLVDAHVKALEKA P KVGIYNVGTG+GRSVKEFVEACKK
Sbjct: 291  KGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFVEACKK 350

Query: 1085 ATGVSIKVDFLARRPGDYAEVLADPTKIFRELNWTAQYTDLQESLQVAWRWQKSHRNGYG 1264
            ATGV IKVD+L RRPGDYAEV ++PTKI +ELNWTAQ+TDLQESL VAWRWQKSH NGYG
Sbjct: 351  ATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSHLNGYG 410


>ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana]
           gi|79318985|ref|NP_001031118.1| UDP-arabinose
           4-epimerase [Arabidopsis thaliana]
           gi|75313130|sp|Q9SA77.1|ARAE1_ARATH RecName:
           Full=UDP-arabinose 4-epimerase 1; AltName:
           Full=UDP-D-xylose 4-epimerase 1
           gi|4587518|gb|AAD25749.1|AC007060_7 Strong similarity to
           F19I3.8 gi|3033381 putative UDP-galactose-4-epimerase
           from Arabidopsis thaliana BAC gb|AC004238 and is a
           member of PF|01370 the NAD dependent
           epimerase/dehydratase family. EST gb|AA597338 comes from
           this gene [Arabidopsis thaliana]
           gi|13272475|gb|AAK17176.1|AF325108_1 unknown protein
           [Arabidopsis thaliana] gi|18086329|gb|AAL57628.1|
           At1g30620/T5I8_7 [Arabidopsis thaliana]
           gi|27363222|gb|AAO11530.1| At1g30620/T5I8_7 [Arabidopsis
           thaliana] gi|28395529|gb|AAO39213.1| UDP-D-xylose
           4-epimerase [Arabidopsis thaliana]
           gi|222423784|dbj|BAH19858.1| AT1G30620 [Arabidopsis
           thaliana] gi|332193130|gb|AEE31251.1| UDP-arabinose
           4-epimerase [Arabidopsis thaliana]
           gi|332193131|gb|AEE31252.1| UDP-arabinose 4-epimerase
           [Arabidopsis thaliana]
          Length = 419

 Score =  336 bits (862), Expect = 7e-90
 Identities = 164/193 (84%), Positives = 179/193 (92%)
 Frame = +3

Query: 3   SLGGMDYVDPKKKSNFIGKILLAAVLTALCILVLKQSPSFNSPSAFSRHEAGITHVLVTG 182
           SLGG+DY DPKKK+N++GKILL A LTALCI +LKQSP+FN+PS FSRHE G+THVLVTG
Sbjct: 18  SLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTG 77

Query: 183 GAGYIGSHAALRLLKDLYRVTIVDNLSRGNLGAIKVLQNLFPEPGRLQFIYADLGDAKAV 362
           GAGYIGSHAALRLLK+ YRVTIVDNLSRGNL A+++LQ LFPEPGRLQFIYADLGDAKAV
Sbjct: 78  GAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAV 137

Query: 363 NKIFSENAFDAVIHFAAVAYVGESTLDPLKYYHNITSNTLVVLEAMAAHGVTTLIYSSTC 542
           NKIF+ENAFDAV+HFAAVAYVGEST  PLKYYHNITSNTLVVLE MAAHGV TLIYSSTC
Sbjct: 138 NKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHGVKTLIYSSTC 197

Query: 543 ATYGEPEKMPITE 581
           ATYGEP+ MPITE
Sbjct: 198 ATYGEPDIMPITE 210



 Score =  325 bits (834), Expect = 1e-86
 Identities = 152/180 (84%), Positives = 171/180 (95%)
 Frame = +2

Query: 725  ILDFHKNSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIPGLKV 904
            ILDF KNS+MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGI+PGL++
Sbjct: 231  ILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQI 290

Query: 905  RGTDYKTADGTCIRDYIDVTDLVDAHVKALEKAEPRKVGIYNVGTGRGRSVKEFVEACKK 1084
            +GTDYKTADGTC+RDYIDVTDLVDAHVKAL+KA+PRKVGIYNVGTG+G SVKEFVEACKK
Sbjct: 291  KGTDYKTADGTCVRDYIDVTDLVDAHVKALQKAKPRKVGIYNVGTGKGSSVKEFVEACKK 350

Query: 1085 ATGVSIKVDFLARRPGDYAEVLADPTKIFRELNWTAQYTDLQESLQVAWRWQKSHRNGYG 1264
            ATGV IK+D+L RR GDYAEV +DP+KI +ELNWTA++T+L+ESL+ AWRWQK HRNGYG
Sbjct: 351  ATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLHRNGYG 410


>ref|XP_002529901.1| UDP-glucose 4-epimerase, putative [Ricinus communis]
           gi|223530628|gb|EEF32504.1| UDP-glucose 4-epimerase,
           putative [Ricinus communis]
          Length = 417

 Score =  335 bits (860), Expect = 1e-89
 Identities = 163/192 (84%), Positives = 180/192 (93%)
 Frame = +3

Query: 6   LGGMDYVDPKKKSNFIGKILLAAVLTALCILVLKQSPSFNSPSAFSRHEAGITHVLVTGG 185
           L G+DY DPK+KSN +GKI+LAA LTALCI++LKQSP+FN+PS FS HE G+ HVLVTGG
Sbjct: 19  LAGLDYADPKRKSNVVGKIILAAALTALCIIMLKQSPTFNTPSPFSLHEDGVVHVLVTGG 78

Query: 186 AGYIGSHAALRLLKDLYRVTIVDNLSRGNLGAIKVLQNLFPEPGRLQFIYADLGDAKAVN 365
           AGYIGSHA+LRLLKD YRVTIVDNLSRGNLGA+KVLQ LFPEPGRLQFIYADLG++K+VN
Sbjct: 79  AGYIGSHASLRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYADLGNSKSVN 138

Query: 366 KIFSENAFDAVIHFAAVAYVGESTLDPLKYYHNITSNTLVVLEAMAAHGVTTLIYSSTCA 545
           KIFSENAFDAV+HFAAVAYVGEST+DPLKYYHNITSNTLVVLE+MAAH V TLIYSSTCA
Sbjct: 139 KIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVKTLIYSSTCA 198

Query: 546 TYGEPEKMPITE 581
           TYGEPEKMPITE
Sbjct: 199 TYGEPEKMPITE 210



 Score =  333 bits (854), Expect = 6e-89
 Identities = 162/180 (90%), Positives = 169/180 (93%)
 Frame = +2

Query: 725  ILDFHKNSNMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIPGLKV 904
            ILDF KNS+MAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII GLKV
Sbjct: 231  ILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIISGLKV 290

Query: 905  RGTDYKTADGTCIRDYIDVTDLVDAHVKALEKAEPRKVGIYNVGTGRGRSVKEFVEACKK 1084
            +GTDYKT DGTCIRDYIDVTDLVDAHVKALEKA P KVGIYNVGTG+GRSV EFVEACKK
Sbjct: 291  KGTDYKTHDGTCIRDYIDVTDLVDAHVKALEKAMPGKVGIYNVGTGKGRSVNEFVEACKK 350

Query: 1085 ATGVSIKVDFLARRPGDYAEVLADPTKIFRELNWTAQYTDLQESLQVAWRWQKSHRNGYG 1264
            ATGV IKVD+L RRPGDYAEV +DPTKI  ELNWTAQ+TDLQESLQVAWRWQK+HRNGYG
Sbjct: 351  ATGVDIKVDYLPRRPGDYAEVYSDPTKIRVELNWTAQHTDLQESLQVAWRWQKAHRNGYG 410


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