BLASTX nr result

ID: Panax21_contig00017116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017116
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273909.1| PREDICTED: U-box domain-containing protein 4...   149   2e-34
ref|XP_002305204.1| predicted protein [Populus trichocarpa] gi|2...   135   5e-30
ref|XP_003538403.1| PREDICTED: U-box domain-containing protein 4...   134   1e-29
ref|XP_002302956.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_003552957.1| PREDICTED: U-box domain-containing protein 4...   129   2e-28

>ref|XP_002273909.1| PREDICTED: U-box domain-containing protein 4 [Vitis vinifera]
           gi|147807233|emb|CAN61950.1| hypothetical protein
           VITISV_002189 [Vitis vinifera]
          Length = 378

 Score =  149 bits (377), Expect = 2e-34
 Identities = 75/111 (67%), Positives = 91/111 (81%)
 Frame = +3

Query: 3   NPNMQEHXXXXXXXXXXXXXNKPTISASGAIPLLVEILSYGSPQAKVDSLMALYNLSTHA 182
           N NMQE+             NKPTISA+GAIPLLVEIL +GSPQA+VD+++ALYNLST++
Sbjct: 117 NSNMQEYATASLLTLSASTINKPTISAAGAIPLLVEILRHGSPQARVDAVLALYNLSTYS 176

Query: 183 DNLNLILRAEPVPSIVNLLKTCKKSSKLAEKCSALIESLVDFEEGRNALTS 335
           DN+++IL A+P+PSIV+LLKTCKKSSK  EKCSALIESLV F+EGR ALTS
Sbjct: 177 DNISIILEAKPIPSIVDLLKTCKKSSKTTEKCSALIESLVAFDEGRTALTS 227


>ref|XP_002305204.1| predicted protein [Populus trichocarpa] gi|222848168|gb|EEE85715.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  135 bits (339), Expect = 5e-30
 Identities = 72/111 (64%), Positives = 83/111 (74%)
 Frame = +3

Query: 3   NPNMQEHXXXXXXXXXXXXXNKPTISASGAIPLLVEILSYGSPQAKVDSLMALYNLSTHA 182
           N  +QE+             NKP ISA GAIPLLVEIL  G  QAKVD++MAL NLSTH+
Sbjct: 126 NSILQEYATASLLTLSASTINKPVISACGAIPLLVEILRNGITQAKVDAVMALSNLSTHS 185

Query: 183 DNLNLILRAEPVPSIVNLLKTCKKSSKLAEKCSALIESLVDFEEGRNALTS 335
           DNL++IL+  P+PSIV+LLKTCKKSSK AEKC ALIESLV F+EGR ALTS
Sbjct: 186 DNLDIILKTNPIPSIVSLLKTCKKSSKTAEKCCALIESLVGFDEGRIALTS 236


>ref|XP_003538403.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 392

 Score =  134 bits (336), Expect = 1e-29
 Identities = 70/111 (63%), Positives = 82/111 (73%)
 Frame = +3

Query: 3   NPNMQEHXXXXXXXXXXXXXNKPTISASGAIPLLVEILSYGSPQAKVDSLMALYNLSTHA 182
           N N+QE              NKP ISA GAIPLLV+IL  GSPQAK +++MAL NLSTH 
Sbjct: 130 NLNLQESATASLLTLSASSTNKPIISACGAIPLLVKILRDGSPQAKAEAVMALSNLSTHP 189

Query: 183 DNLNLILRAEPVPSIVNLLKTCKKSSKLAEKCSALIESLVDFEEGRNALTS 335
           +NL +IL+  P+P IV+LLKTCKKSSK AEKC ALIESLVD++EGR ALTS
Sbjct: 190 NNLRIILKTNPIPFIVDLLKTCKKSSKTAEKCCALIESLVDYDEGRTALTS 240


>ref|XP_002302956.1| predicted protein [Populus trichocarpa] gi|222844682|gb|EEE82229.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  130 bits (326), Expect = 1e-28
 Identities = 66/91 (72%), Positives = 78/91 (85%)
 Frame = +3

Query: 63  NKPTISASGAIPLLVEILSYGSPQAKVDSLMALYNLSTHADNLNLILRAEPVPSIVNLLK 242
           NK  ISA+GAIPLLV+IL  G+ QAKVD++MAL NLSTH++NL++IL+  P+PSIV+LLK
Sbjct: 150 NKQVISATGAIPLLVDILRNGNTQAKVDAVMALSNLSTHSNNLDIILKTNPIPSIVSLLK 209

Query: 243 TCKKSSKLAEKCSALIESLVDFEEGRNALTS 335
           TCKKSSK AEKC ALIESLV F EGR ALTS
Sbjct: 210 TCKKSSKTAEKCCALIESLVGFHEGRTALTS 240


>ref|XP_003552957.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 384

 Score =  129 bits (325), Expect = 2e-28
 Identities = 68/111 (61%), Positives = 80/111 (72%)
 Frame = +3

Query: 3   NPNMQEHXXXXXXXXXXXXXNKPTISASGAIPLLVEILSYGSPQAKVDSLMALYNLSTHA 182
           N N+QE              NKP ISA G IPLLV+IL  GS QAK D++MAL NLSTH 
Sbjct: 122 NLNLQESATASLLTLSASSTNKPIISACGVIPLLVQILRDGSHQAKADAVMALSNLSTHT 181

Query: 183 DNLNLILRAEPVPSIVNLLKTCKKSSKLAEKCSALIESLVDFEEGRNALTS 335
           +NL++IL   P+P +V+LLKTCKKSSK AEKC ALIESLVD++EGR ALTS
Sbjct: 182 NNLSIILETNPIPYMVDLLKTCKKSSKTAEKCCALIESLVDYDEGRTALTS 232


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