BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017107
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   128   1e-32
emb|CAN69425.1| hypothetical protein VITISV_043713 [Vitis vinifera]   128   1e-32
ref|XP_002329202.1| chromatin remodeling complex subunit [Populu...   128   1e-29
ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t...   121   8e-29
emb|CBI25341.3| unnamed protein product [Vitis vinifera]              129   3e-28

>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  128 bits (321), Expect(2) = 1e-32
 Identities = 59/94 (62%), Positives = 74/94 (78%)
 Frame = +3

Query: 57  LRKLGGLFQSHSDEMGLGKTVEVLACIFAHRKSASEVGHVSADIMQVSRDQKNNIKRMKR 236
           L   GG+    +DEMGLGKTVE+LACIFAHRK ASE G +  + +Q ++ QK N+KR+KR
Sbjct: 347 LNVYGGIL---ADEMGLGKTVELLACIFAHRKPASESGILLNNALQAAQGQKINLKRLKR 403

Query: 237 ERVECVCGAVSESSKYEGLWVQCDICDAWQQATC 338
           + VEC+CGAVSES +Y+GLWVQCD+CDAWQ A C
Sbjct: 404 DHVECICGAVSESPRYKGLWVQCDVCDAWQHADC 437



 Score = 36.6 bits (83), Expect(2) = 1e-32
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +1

Query: 331 QHADCVGYSATDKTSKSREVS 393
           QHADCVGYS T KT+KS+E S
Sbjct: 433 QHADCVGYSPTAKTTKSKENS 453


>emb|CAN69425.1| hypothetical protein VITISV_043713 [Vitis vinifera]
          Length = 1111

 Score =  128 bits (321), Expect(2) = 1e-32
 Identities = 59/94 (62%), Positives = 74/94 (78%)
 Frame = +3

Query: 57  LRKLGGLFQSHSDEMGLGKTVEVLACIFAHRKSASEVGHVSADIMQVSRDQKNNIKRMKR 236
           L   GG+    +DEMGLGKTVE+LACIFAHRK ASE G +  + +Q ++ QK N+KR+KR
Sbjct: 349 LNVYGGIL---ADEMGLGKTVELLACIFAHRKPASESGILLNNALQAAQGQKINLKRLKR 405

Query: 237 ERVECVCGAVSESSKYEGLWVQCDICDAWQQATC 338
           + VEC+CGAVSES +Y+GLWVQCD+CDAWQ A C
Sbjct: 406 DHVECICGAVSESPRYKGLWVQCDVCDAWQHADC 439



 Score = 36.6 bits (83), Expect(2) = 1e-32
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +1

Query: 331 QHADCVGYSATDKTSKSREVS 393
           QHADCVGYS T KT+KS+E S
Sbjct: 435 QHADCVGYSPTAKTTKSKENS 455


>ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222870983|gb|EEF08114.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1320

 Score =  128 bits (321), Expect(2) = 1e-29
 Identities = 60/83 (72%), Positives = 68/83 (81%)
 Frame = +3

Query: 90  SDEMGLGKTVEVLACIFAHRKSASEVGHVSADIMQVSRDQKNNIKRMKRERVECVCGAVS 269
           +DEMGLGKTVE+LACI AHRKS S+ G V A   Q + +QK N+KR+KRERVECVCGAVS
Sbjct: 366 ADEMGLGKTVELLACILAHRKSTSDDGSVVAPTWQNTGNQKINLKRLKRERVECVCGAVS 425

Query: 270 ESSKYEGLWVQCDICDAWQQATC 338
           +S KY GLWVQCDICDAWQ A C
Sbjct: 426 DSYKYRGLWVQCDICDAWQHADC 448



 Score = 26.6 bits (57), Expect(2) = 1e-29
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 331 QHADCVGYSATDKTSKS 381
           QHADCVGYS   K   S
Sbjct: 444 QHADCVGYSPRGKKKMS 460


>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
           gi|355516770|gb|AES98393.1| ATP-dependent helicase,
           putative [Medicago truncatula]
          Length = 1764

 Score =  121 bits (304), Expect(2) = 8e-29
 Identities = 56/83 (67%), Positives = 66/83 (79%)
 Frame = +3

Query: 90  SDEMGLGKTVEVLACIFAHRKSASEVGHVSADIMQVSRDQKNNIKRMKRERVECVCGAVS 269
           +DEMGLGKTVE+LA IFAHR+SA E   +   + QV  D+K  +KR++RERVEC+CGAVS
Sbjct: 422 TDEMGLGKTVELLALIFAHRRSADESDTLIDSVPQVKGDEKVVLKRLRRERVECICGAVS 481

Query: 270 ESSKYEGLWVQCDICDAWQQATC 338
           ES KYEGLWVQCDICDAWQ   C
Sbjct: 482 ESLKYEGLWVQCDICDAWQHGDC 504



 Score = 30.4 bits (67), Expect(2) = 8e-29
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 331 QHADCVGYSATDKTSKSREVSKDKGS 408
           QH DCVGYS   K+ KS++  + K S
Sbjct: 500 QHGDCVGYSTKGKSLKSKQGLESKTS 525


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/95 (62%), Positives = 75/95 (78%)
 Frame = +3

Query: 57  LRKLGGLFQSHSDEMGLGKTVEVLACIFAHRKSASEVGHVSADIMQVSRDQKNNIKRMKR 236
           L   GG+    +DEMGLGKTVE+LACIFAHRK ASE G +  + +Q ++ QK N+KR+KR
Sbjct: 407 LNVYGGIL---ADEMGLGKTVELLACIFAHRKPASESGILLNNALQAAQGQKINLKRLKR 463

Query: 237 ERVECVCGAVSESSKYEGLWVQCDICDAWQQATCR 341
           + VEC+CGAVSES +Y+GLWVQCD+CDAWQ A C+
Sbjct: 464 DHVECICGAVSESPRYKGLWVQCDVCDAWQHADCK 498