BLASTX nr result

ID: Panax21_contig00017104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017104
         (1258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis...   689   0.0  
ref|XP_002509850.1| polygalacturonase, putative [Ricinus communi...   682   0.0  
ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [...   682   0.0  
ref|XP_002299511.1| predicted protein [Populus trichocarpa] gi|2...   675   0.0  
ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [...   674   0.0  

>ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
          Length = 480

 Score =  689 bits (1777), Expect = 0.0
 Identities = 327/377 (86%), Positives = 355/377 (94%)
 Frame = +2

Query: 128  FEHAAISCRAHSASLTDFGGVGDGITSNTKAFQAAIDHLSQFESQGGSQLFVPPGKWLTS 307
            FE++AI+CRAHSASLTDFGGVGDG TSNTKAFQAAIDHLSQF S GGSQLFVPPG+WLT 
Sbjct: 41   FEYSAINCRAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTG 100

Query: 308  SFNLTSRFTLYIHKDAVLLASQDESEWAVIDPLPSYGRGRDTAGGRYISLIFGTNLTDVV 487
            SFNLTS FTLY+HKDAVLLASQDE EW VIDPLPSYGRGRDT GGRYISLIFGTNLTDVV
Sbjct: 101  SFNLTSHFTLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVV 160

Query: 488  ITGDNGTIDGQGEVWWDKFHKGELQYTRPYLIEIMYSENIQISNLTLLNSPSWNVHPIYS 667
            ITG+NGTIDGQG +WW KFHKGEL+YTRPYLIEIM+S+N+QIS+LTL+NSPSWNVHP+YS
Sbjct: 161  ITGENGTIDGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYS 220

Query: 668  RNIIVQGITILAPVRSPNTDGINPDSCINTRIEDCYIVSGDDCIAVKSGWDEYGIAFGMP 847
             N+I+QG+TI APV SPNTDGINPDSC NTRIEDCYIVSGDDCIAVKSGWDEYGIA+GMP
Sbjct: 221  SNVIIQGLTITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMP 280

Query: 848  TKQLVIRRLTCISPTSAVIALGSEMSGGIQDVRAEDILAINSESGVRIKTAVGRGGYVKD 1027
            TKQLVIRRLTCISP SA IALGSEMSGGI+DVRAEDILAI++ESGVRIKTAVGRGGYVKD
Sbjct: 281  TKQLVIRRLTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESGVRIKTAVGRGGYVKD 340

Query: 1028 IYVRGMILKTMKWAFWMTGDYGSHPDNNYDPNALPEIKNINYRDVVAENVTMAAKLDGIS 1207
            IYVR MI+KTMKWAFWMTG+YGSH DNNYDPNALP I+ INYRD+VAENVTMA +L+GIS
Sbjct: 341  IYVRSMIMKTMKWAFWMTGNYGSHADNNYDPNALPAIQGINYRDMVAENVTMAGRLEGIS 400

Query: 1208 GDPFTGICISNVTIEMA 1258
            GDPFTGICISNVTI +A
Sbjct: 401  GDPFTGICISNVTIGLA 417


>ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
            gi|223549749|gb|EEF51237.1| polygalacturonase, putative
            [Ricinus communis]
          Length = 480

 Score =  682 bits (1761), Expect = 0.0
 Identities = 323/378 (85%), Positives = 348/378 (92%)
 Frame = +2

Query: 125  CFEHAAISCRAHSASLTDFGGVGDGITSNTKAFQAAIDHLSQFESQGGSQLFVPPGKWLT 304
            CFE+AAISCRAH ASL DFGGVGDG TSNTKAFQAAIDHLSQF   GGSQL+VPPGKWLT
Sbjct: 40   CFEYAAISCRAHEASLEDFGGVGDGQTSNTKAFQAAIDHLSQFSYDGGSQLYVPPGKWLT 99

Query: 305  SSFNLTSRFTLYIHKDAVLLASQDESEWAVIDPLPSYGRGRDTAGGRYISLIFGTNLTDV 484
             SFNLTS FTL++ KDAVLLASQDESEW VI+PLPSYGRGRDT GGRY SLIFGTNLTDV
Sbjct: 100  GSFNLTSHFTLFLDKDAVLLASQDESEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDV 159

Query: 485  VITGDNGTIDGQGEVWWDKFHKGELQYTRPYLIEIMYSENIQISNLTLLNSPSWNVHPIY 664
            VITG NGTIDGQG++WW KFH GE+ YTRPYLIEIMYS NIQISNLTL+NSPSWN+HP Y
Sbjct: 160  VITGANGTIDGQGDLWWKKFHNGEINYTRPYLIEIMYSNNIQISNLTLMNSPSWNIHPTY 219

Query: 665  SRNIIVQGITILAPVRSPNTDGINPDSCINTRIEDCYIVSGDDCIAVKSGWDEYGIAFGM 844
            S N++VQGITILAPV SPNTDGINPDSC NTRIEDCYIVSGDDC+AVKSGWDEYGI+FGM
Sbjct: 220  SSNVVVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGM 279

Query: 845  PTKQLVIRRLTCISPTSAVIALGSEMSGGIQDVRAEDILAINSESGVRIKTAVGRGGYVK 1024
            PTKQLVIRRLTCISPTSA IALGSEMSGGIQDVRAEDI  IN+ESGVRIKT+VGRGGYVK
Sbjct: 280  PTKQLVIRRLTCISPTSAAIALGSEMSGGIQDVRAEDITCINTESGVRIKTSVGRGGYVK 339

Query: 1025 DIYVRGMILKTMKWAFWMTGDYGSHPDNNYDPNALPEIKNINYRDVVAENVTMAAKLDGI 1204
            DIYVR M + TMKW FWMTG+YGSHPDNNYDPNA+P I+NINYRD+VAENVTMAA+L+GI
Sbjct: 340  DIYVRKMTMHTMKWVFWMTGNYGSHPDNNYDPNAIPVIENINYRDIVAENVTMAARLEGI 399

Query: 1205 SGDPFTGICISNVTIEMA 1258
            +GDPFTGICISNVTI +A
Sbjct: 400  AGDPFTGICISNVTIGLA 417


>ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 469

 Score =  682 bits (1759), Expect = 0.0
 Identities = 322/377 (85%), Positives = 356/377 (94%)
 Frame = +2

Query: 128  FEHAAISCRAHSASLTDFGGVGDGITSNTKAFQAAIDHLSQFESQGGSQLFVPPGKWLTS 307
            FE+ A+SCRA+SASL +FGGVGDG T NTKAFQAAIDHLSQ+ S GGSQL+VPPGKWLT 
Sbjct: 31   FEYCAMSCRAYSASLEEFGGVGDGTTLNTKAFQAAIDHLSQYASSGGSQLYVPPGKWLTG 90

Query: 308  SFNLTSRFTLYIHKDAVLLASQDESEWAVIDPLPSYGRGRDTAGGRYISLIFGTNLTDVV 487
            SFNLTS FTL++HKDAV+LASQDE++W VIDPLPSYGRGRDT GGR+ SLIFGTNLTDV+
Sbjct: 91   SFNLTSHFTLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVI 150

Query: 488  ITGDNGTIDGQGEVWWDKFHKGELQYTRPYLIEIMYSENIQISNLTLLNSPSWNVHPIYS 667
            ITGDNGTIDGQG++WW KF KGEL+YTRPYLIEIMYS+N+QISNLTL+NSPSWNVHPIYS
Sbjct: 151  ITGDNGTIDGQGDLWWQKFRKGELKYTRPYLIEIMYSDNVQISNLTLVNSPSWNVHPIYS 210

Query: 668  RNIIVQGITILAPVRSPNTDGINPDSCINTRIEDCYIVSGDDCIAVKSGWDEYGIAFGMP 847
             N++VQGITILAPV SPNTDGINPDSC NTRIEDCYIVSGDDC+AVKSGWDEYGIA+GMP
Sbjct: 211  SNLVVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 270

Query: 848  TKQLVIRRLTCISPTSAVIALGSEMSGGIQDVRAEDILAINSESGVRIKTAVGRGGYVKD 1027
            TKQLVIRRLTCISP SAVIALGSEMSGGIQDVRAEDI+AINSESGVRIKTAVGRGGYVKD
Sbjct: 271  TKQLVIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKD 330

Query: 1028 IYVRGMILKTMKWAFWMTGDYGSHPDNNYDPNALPEIKNINYRDVVAENVTMAAKLDGIS 1207
            I+VR M +KTMKWAFWMTG+YGSH D+NYDPNALP I+NINYRD+VAENVTMAA+L+GIS
Sbjct: 331  IFVRRMTMKTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGIS 390

Query: 1208 GDPFTGICISNVTIEMA 1258
            GDPFTGICISNVTI++A
Sbjct: 391  GDPFTGICISNVTIQLA 407


>ref|XP_002299511.1| predicted protein [Populus trichocarpa] gi|222846769|gb|EEE84316.1|
            predicted protein [Populus trichocarpa]
          Length = 481

 Score =  675 bits (1741), Expect = 0.0
 Identities = 321/377 (85%), Positives = 351/377 (93%)
 Frame = +2

Query: 128  FEHAAISCRAHSASLTDFGGVGDGITSNTKAFQAAIDHLSQFESQGGSQLFVPPGKWLTS 307
            FE+AA+SCRAHSAS++DFGGVGDG T+NTKAFQAAIDHLSQF S+GGS L+VPPG+WLT 
Sbjct: 41   FEYAALSCRAHSASVSDFGGVGDGTTANTKAFQAAIDHLSQFSSEGGSILYVPPGRWLTG 100

Query: 308  SFNLTSRFTLYIHKDAVLLASQDESEWAVIDPLPSYGRGRDTAGGRYISLIFGTNLTDVV 487
            SFNLTS FTLY+ KDAVLLASQDESE+ +I+PLPSYGRGRD  G RY SLIFG NLTDV+
Sbjct: 101  SFNLTSYFTLYLDKDAVLLASQDESEYPLIEPLPSYGRGRDADGARYSSLIFGNNLTDVI 160

Query: 488  ITGDNGTIDGQGEVWWDKFHKGELQYTRPYLIEIMYSENIQISNLTLLNSPSWNVHPIYS 667
            ITG NGTIDGQGE+WW KF  GEL YTRPYLIEIM+S NIQISNLTL+NSPSWNVHP+Y 
Sbjct: 161  ITGANGTIDGQGELWWTKFRAGELNYTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYC 220

Query: 668  RNIIVQGITILAPVRSPNTDGINPDSCINTRIEDCYIVSGDDCIAVKSGWDEYGIAFGMP 847
             N++VQG+TILAPVRSPNTDGINPDSC NTRIEDCYIVSGDDC+AVKSGWDEYGI+FGMP
Sbjct: 221  SNVVVQGLTILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMP 280

Query: 848  TKQLVIRRLTCISPTSAVIALGSEMSGGIQDVRAEDILAINSESGVRIKTAVGRGGYVKD 1027
            TKQLVIRRLTCISPTSAVIALGSEMSGGI+DVRAEDI AI+SESGVRIKTAVGRGGYVKD
Sbjct: 281  TKQLVIRRLTCISPTSAVIALGSEMSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKD 340

Query: 1028 IYVRGMILKTMKWAFWMTGDYGSHPDNNYDPNALPEIKNINYRDVVAENVTMAAKLDGIS 1207
            IYVRGM LKTMKW FWMTG+YGSHPDNNYDPNA+P I+NINYRDVVAENVTMAAKL+GI+
Sbjct: 341  IYVRGMTLKTMKWVFWMTGNYGSHPDNNYDPNAIPVIQNINYRDVVAENVTMAAKLEGIA 400

Query: 1208 GDPFTGICISNVTIEMA 1258
            GDPFTGICISNVTI +A
Sbjct: 401  GDPFTGICISNVTIGLA 417


>ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 494

 Score =  674 bits (1738), Expect = 0.0
 Identities = 315/377 (83%), Positives = 356/377 (94%)
 Frame = +2

Query: 128  FEHAAISCRAHSASLTDFGGVGDGITSNTKAFQAAIDHLSQFESQGGSQLFVPPGKWLTS 307
            FE+ A+SCRA+SASL +FGGVGDG T NTKAFQAAI++LSQ+ + GGSQL+VPPGKWLT 
Sbjct: 56   FEYCAMSCRAYSASLEEFGGVGDGTTLNTKAFQAAIENLSQYAASGGSQLYVPPGKWLTG 115

Query: 308  SFNLTSRFTLYIHKDAVLLASQDESEWAVIDPLPSYGRGRDTAGGRYISLIFGTNLTDVV 487
            SFNLTS FTL++HKDAV+LASQDE++W VIDPLPSYGRGRDT GGR+ SLIFGTNLTDV+
Sbjct: 116  SFNLTSHFTLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVI 175

Query: 488  ITGDNGTIDGQGEVWWDKFHKGELQYTRPYLIEIMYSENIQISNLTLLNSPSWNVHPIYS 667
            ITGDNGTIDGQG++WW KFHKGEL+YTRPYL+EIMYS+N+QISNLTL+NSPSWNVHPIYS
Sbjct: 176  ITGDNGTIDGQGDLWWQKFHKGELKYTRPYLVEIMYSDNVQISNLTLVNSPSWNVHPIYS 235

Query: 668  RNIIVQGITILAPVRSPNTDGINPDSCINTRIEDCYIVSGDDCIAVKSGWDEYGIAFGMP 847
             N++VQGITILAPV SPNTDGINPDSC +TRIEDCYIVSGDDC+AVKSGWDEYGIA+GMP
Sbjct: 236  SNVVVQGITILAPVTSPNTDGINPDSCTDTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMP 295

Query: 848  TKQLVIRRLTCISPTSAVIALGSEMSGGIQDVRAEDILAINSESGVRIKTAVGRGGYVKD 1027
            TKQLVIRRLTCISP SA IALGSEMSGGIQD+RAEDI+AIN+ESGVRIKTAVGRGGYVKD
Sbjct: 296  TKQLVIRRLTCISPFSAAIALGSEMSGGIQDMRAEDIVAINTESGVRIKTAVGRGGYVKD 355

Query: 1028 IYVRGMILKTMKWAFWMTGDYGSHPDNNYDPNALPEIKNINYRDVVAENVTMAAKLDGIS 1207
            I+VR M +KTMKWAFWMTG+YGSH D+NYDPNALP I+NINYRD+VAENVTMAA+L+GIS
Sbjct: 356  IFVRRMTMKTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGIS 415

Query: 1208 GDPFTGICISNVTIEMA 1258
            GDPFTGICISNVTI++A
Sbjct: 416  GDPFTGICISNVTIQLA 432


Top