BLASTX nr result
ID: Panax21_contig00017096
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00017096
(436 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002528658.1| conserved hypothetical protein [Ricinus comm... 188 4e-46
ref|XP_002315096.1| predicted protein [Populus trichocarpa] gi|2... 187 8e-46
ref|XP_002312214.1| predicted protein [Populus trichocarpa] gi|2... 185 4e-45
ref|XP_004173786.1| PREDICTED: zinc finger CCCH domain-containin... 183 1e-44
ref|XP_004148293.1| PREDICTED: zinc finger CCCH domain-containin... 183 1e-44
>ref|XP_002528658.1| conserved hypothetical protein [Ricinus communis]
gi|223531909|gb|EEF33724.1| conserved hypothetical
protein [Ricinus communis]
Length = 500
Score = 188 bits (477), Expect = 4e-46
Identities = 90/137 (65%), Positives = 104/137 (75%), Gaps = 4/137 (2%)
Frame = +2
Query: 2 NHPKDKITPLAALENADISALPQRPSEPPCAFYTKTGKCKFGVTCKFHHPKDIVIPLSDQ 181
NHPKD++ L + ++ D+ ALP+RPSEP CAFY KTG+CKFG TCKFHHPKDI I L +
Sbjct: 206 NHPKDELA-LGSSQSNDVFALPERPSEPICAFYAKTGRCKFGATCKFHHPKDIQIALGQE 264
Query: 182 EYGSGHSEA--VTNDTTRDFTTVNP--TFTTALLHNSKGLPVRPGEVDCPFYLKTGSCKY 349
+EA +T+ TT D V +F ALLHNSKGLP+RPGEVDCPFYLKTGSCKY
Sbjct: 265 NCNIMQNEAAAMTHGTTGDVNAVKACISFNQALLHNSKGLPIRPGEVDCPFYLKTGSCKY 324
Query: 350 GATCRYNHPDRYAINPP 400
GATCRYNHPDR AINPP
Sbjct: 325 GATCRYNHPDRNAINPP 341
Score = 90.9 bits (224), Expect = 1e-16
Identities = 46/104 (44%), Positives = 57/104 (54%)
Frame = +2
Query: 65 PQRPSEPPCAFYTKTGKCKFGVTCKFHHPKDIVIPLSDQEYGSGHSEAVTNDTTRDFTTV 244
PQRP C +Y KTG+CKFG C+FHHP D P + Q +AV
Sbjct: 389 PQRPGHAECDYYMKTGECKFGERCRFHHPIDRSAPTATQ----AQQQAVK---------- 434
Query: 245 NPTFTTALLHNSKGLPVRPGEVDCPFYLKTGSCKYGATCRYNHP 376
T A GLP R G V CP+Y+KTG+CKYGATC+++HP
Sbjct: 435 ---LTLA------GLPRREGAVHCPYYMKTGTCKYGATCKFDHP 469
Score = 80.9 bits (198), Expect = 1e-13
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = +2
Query: 20 ITPLAALENA-DISALPQRPSEPPCAFYTKTGKCKFGVTCKFHHPKDIVIPLSDQEYGSG 196
+T + E+A + S PQRP E CA Y T CKFG +CKF HP + +P E G
Sbjct: 112 LTKRSRFESASNYSIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHP--VWVP----EGGIP 165
Query: 197 HSEAVTNDTTRDFTTVNPTFTTALLHNSKGLPVRPGEVDCPFYLKTGSCKYGATCRYNHP 376
+ + V L ++ LP RPGE DCP++LKT CKYG+ C++NHP
Sbjct: 166 NWKEVP-----------------LAATTEPLPERPGEPDCPYFLKTQRCKYGSKCKFNHP 208
>ref|XP_002315096.1| predicted protein [Populus trichocarpa] gi|222864136|gb|EEF01267.1|
predicted protein [Populus trichocarpa]
Length = 532
Score = 187 bits (475), Expect = 8e-46
Identities = 91/140 (65%), Positives = 103/140 (73%), Gaps = 7/140 (5%)
Frame = +2
Query: 2 NHPKDKITPLAALENADISALPQRPSEPPCAFYTKTGKCKFGVTCKFHHPKDIVIPLSDQ 181
NHPK+K++ L EN+ +SALP+RPSEPPCAFY KTGKCKFG +CKFHHPKDI IPLS
Sbjct: 245 NHPKEKLS-LGDSENSSVSALPERPSEPPCAFYMKTGKCKFGASCKFHHPKDIQIPLS-- 301
Query: 182 EYGSGHSEAVTNDT-------TRDFTTVNPTFTTALLHNSKGLPVRPGEVDCPFYLKTGS 340
G G+ V D+ T D + T AL HNSKGLP+R GEVDCPFYLKTGS
Sbjct: 302 --GLGNDNGVQTDSVVKNEGITGDVDVIYSPVTPALHHNSKGLPIRLGEVDCPFYLKTGS 359
Query: 341 CKYGATCRYNHPDRYAINPP 400
CKYGATCRYNHP+R AINPP
Sbjct: 360 CKYGATCRYNHPERTAINPP 379
Score = 94.0 bits (232), Expect = 1e-17
Identities = 49/119 (41%), Positives = 62/119 (52%)
Frame = +2
Query: 20 ITPLAALENADISALPQRPSEPPCAFYTKTGKCKFGVTCKFHHPKDIVIPLSDQEYGSGH 199
I P ++ + PQRP + C FY KTG+CKFG CKFHHP D P Q
Sbjct: 410 IDPRLSMLGVGPTFYPQRPGQTECDFYMKTGECKFGERCKFHHPIDRSAPTEKQ------ 463
Query: 200 SEAVTNDTTRDFTTVNPTFTTALLHNSKGLPVRPGEVDCPFYLKTGSCKYGATCRYNHP 376
+ T + T A GLP R G V CP+Y+KTG+CKYGATC+++HP
Sbjct: 464 ---IQQQTVK--------LTLA------GLPRREGAVHCPYYMKTGACKYGATCKFDHP 505
Score = 80.5 bits (197), Expect = 1e-13
Identities = 44/104 (42%), Positives = 53/104 (50%)
Frame = +2
Query: 65 PQRPSEPPCAFYTKTGKCKFGVTCKFHHPKDIVIPLSDQEYGSGHSEAVTNDTTRDFTTV 244
PQRP E CA Y T CKFG TCKF HP + +P E G + V
Sbjct: 167 PQRPGEKDCAHYMLTRTCKFGDTCKFDHP--VWVP----EGGIPDWKEVP---------- 210
Query: 245 NPTFTTALLHNSKGLPVRPGEVDCPFYLKTGSCKYGATCRYNHP 376
L+ S+ P RPGE DCP++LKT CKYG C++NHP
Sbjct: 211 -------LIATSETFPERPGEPDCPYFLKTQRCKYGLNCKFNHP 247
>ref|XP_002312214.1| predicted protein [Populus trichocarpa] gi|222852034|gb|EEE89581.1|
predicted protein [Populus trichocarpa]
Length = 474
Score = 185 bits (469), Expect = 4e-45
Identities = 91/138 (65%), Positives = 101/138 (73%), Gaps = 5/138 (3%)
Frame = +2
Query: 2 NHPKDKITPLAALENADISALPQRPSEPPCAFYTKTGKCKFGVTCKFHHPKDIVIPLSDQ 181
NHPK+K++ L EN ISALP+RPSEPPCAFY KTG CKFG TCKFHHPKDI I L+ Q
Sbjct: 230 NHPKEKMS-LGVSENTSISALPERPSEPPCAFYMKTGICKFGATCKFHHPKDIQISLAGQ 288
Query: 182 EYGSG---HSEAVTNDTTRDFTTVNP--TFTTALLHNSKGLPVRPGEVDCPFYLKTGSCK 346
G +S T D + + T ALLHNSKGLP+RPGEVDCPFYLKTGSCK
Sbjct: 289 GNDDGVQTNSVVDNGGITGDVNVIKALVSVTPALLHNSKGLPMRPGEVDCPFYLKTGSCK 348
Query: 347 YGATCRYNHPDRYAINPP 400
YGATCRYNHP+R AINPP
Sbjct: 349 YGATCRYNHPERTAINPP 366
Score = 89.7 bits (221), Expect = 2e-16
Identities = 50/132 (37%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Frame = +2
Query: 20 ITPLAALENADISALPQRPSEPPCAFYTKTGKCKFGVTCKFHHPKDIVIPLSDQEYG--- 190
+TP A L N+ LP RP E C FY KTG CK+G TC+++HP+ I G
Sbjct: 318 VTP-ALLHNS--KGLPMRPGEVDCPFYLKTGSCKYGATCRYNHPERTAINPPAAAIGHPI 374
Query: 191 -----SGHSEAVTNDTTRDFTTVNPTFTTALLHNSKGLPVRPGEVDCPFYLKTGSCKYGA 355
+ + V + + T++P +T L P RPG+ +C FY+KTG CK+G
Sbjct: 375 IAPSMANLNLGVFSPAASIYQTIDPRLST-LGVGPTVYPQRPGQAECDFYMKTGECKFGE 433
Query: 356 TCRYNHP-DRYA 388
TC+++HP DR A
Sbjct: 434 TCKFHHPIDRSA 445
Score = 80.1 bits (196), Expect = 2e-13
Identities = 43/104 (41%), Positives = 52/104 (50%)
Frame = +2
Query: 65 PQRPSEPPCAFYTKTGKCKFGVTCKFHHPKDIVIPLSDQEYGSGHSEAVTNDTTRDFTTV 244
PQRP E CA+Y T CKFG TCKF HP + +P D+ V
Sbjct: 152 PQRPGEKDCAYYMLTRTCKFGDTCKFDHP--VWVP---------------EGGIPDWKEV 194
Query: 245 NPTFTTALLHNSKGLPVRPGEVDCPFYLKTGSCKYGATCRYNHP 376
P T S+ P RPG DCP++LKT CKYG C++NHP
Sbjct: 195 PPIAT------SETFPDRPGVPDCPYFLKTQRCKYGLNCKFNHP 232
Score = 58.5 bits (140), Expect = 5e-07
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +2
Query: 65 PQRPSEPPCAFYTKTGKCKFGVTCKFHHPKDIVIPLSDQ 181
PQRP + C FY KTG+CKFG TCKFHHP D P + Q
Sbjct: 412 PQRPGQAECDFYMKTGECKFGETCKFHHPIDRSAPTAKQ 450
>ref|XP_004173786.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like,
partial [Cucumis sativus]
Length = 266
Score = 183 bits (464), Expect = 1e-44
Identities = 87/136 (63%), Positives = 102/136 (75%), Gaps = 4/136 (2%)
Frame = +2
Query: 2 NHPKDKITPLAALENADISALPQRPSEPPCAFYTKTGKCKFGVTCKFHHPKDIVIPLSDQ 181
NHPKD+ + A E +D S+LP+RPSEP CAFY KTG CKFG+ CKFHHPKDI I LS +
Sbjct: 94 NHPKDRSDSVGA-EKSDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQI-LSGE 151
Query: 182 EYGSGHSEAV--TNDTTRDFTTVNP--TFTTALLHNSKGLPVRPGEVDCPFYLKTGSCKY 349
EYG+ + T + DF V P + + A++HNSKGLP+RPGEVDCPFYLKTGSCKY
Sbjct: 152 EYGNSEQTLMVKTEERAGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKY 211
Query: 350 GATCRYNHPDRYAINP 397
G TCRYNHPDR AINP
Sbjct: 212 GTTCRYNHPDRNAINP 227
>ref|XP_004148293.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like
[Cucumis sativus]
Length = 527
Score = 183 bits (464), Expect = 1e-44
Identities = 87/136 (63%), Positives = 102/136 (75%), Gaps = 4/136 (2%)
Frame = +2
Query: 2 NHPKDKITPLAALENADISALPQRPSEPPCAFYTKTGKCKFGVTCKFHHPKDIVIPLSDQ 181
NHPKD+ + A E +D S+LP+RPSEP CAFY KTG CKFG+ CKFHHPKDI I LS +
Sbjct: 237 NHPKDRSDSVGA-EKSDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQI-LSGE 294
Query: 182 EYGSGHSEAV--TNDTTRDFTTVNP--TFTTALLHNSKGLPVRPGEVDCPFYLKTGSCKY 349
EYG+ + T + DF V P + + A++HNSKGLP+RPGEVDCPFYLKTGSCKY
Sbjct: 295 EYGNSEQTLMVKTEERAGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKY 354
Query: 350 GATCRYNHPDRYAINP 397
G TCRYNHPDR AINP
Sbjct: 355 GTTCRYNHPDRNAINP 370
Score = 88.2 bits (217), Expect = 6e-16
Identities = 45/107 (42%), Positives = 56/107 (52%)
Frame = +2
Query: 56 SALPQRPSEPPCAFYTKTGKCKFGVTCKFHHPKDIVIPLSDQEYGSGHSEAVTNDTTRDF 235
S PQRP + C FY KTG CKFG CKFHHP D P + G+ H+ +T
Sbjct: 415 SIYPQRPGQIECDFYMKTGDCKFGERCKFHHPIDRSAP----KQGALHNVKLT------- 463
Query: 236 TTVNPTFTTALLHNSKGLPVRPGEVDCPFYLKTGSCKYGATCRYNHP 376
GLP R + CP+YLKTG+CKYG TC+++HP
Sbjct: 464 --------------LAGLPRREEAIICPYYLKTGTCKYGTTCKFDHP 496
Score = 76.6 bits (187), Expect = 2e-12
Identities = 42/110 (38%), Positives = 57/110 (51%)
Frame = +2
Query: 47 ADISALPQRPSEPPCAFYTKTGKCKFGVTCKFHHPKDIVIPLSDQEYGSGHSEAVTNDTT 226
+++ PQRP E CA Y T CKFG +CKF HP I +P E G + V
Sbjct: 153 SNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHP--IWVP----EGGIPDWKEVPQ--- 203
Query: 227 RDFTTVNPTFTTALLHNSKGLPVRPGEVDCPFYLKTGSCKYGATCRYNHP 376
+ NS+ LP R G+ DCP++LKT CK+G+ C++NHP
Sbjct: 204 --------------IANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHP 239