BLASTX nr result
ID: Panax21_contig00017095
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00017095
(2414 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleopro... 780 0.0
emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera] 776 0.0
ref|XP_002308919.1| predicted protein [Populus trichocarpa] gi|2... 725 0.0
ref|XP_004162536.1| PREDICTED: U4/U6 small nuclear ribonucleopro... 718 0.0
ref|XP_004146749.1| PREDICTED: U4/U6 small nuclear ribonucleopro... 718 0.0
>ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
protein-like [Vitis vinifera]
Length = 577
Score = 780 bits (2013), Expect = 0.0
Identities = 409/578 (70%), Positives = 439/578 (75%), Gaps = 2/578 (0%)
Frame = -3
Query: 2229 MDIDEENSASTSLAEPSVAVPDSQTVGSAIDSIPAQLVQXXXXXXXXXXXXXXXXXXXXX 2050
MD+DEEN S SLAEPS AV D QT S ID P +Q
Sbjct: 1 MDVDEENPVSVSLAEPSAAVTDDQTPVSTIDPTPLPAMQPIIPSLVPPPIVPPIAPIPSV 60
Query: 2049 XXXXXXXXXXXXXXXXXXXXXXXQNGGIKGXXXXXXXXXSGALRNTAGXXXXXXXXXXXX 1870
QNG ++ SG + +G
Sbjct: 61 SAPILRPLAPLPVRPPVLRPPLPQNGEMRASDSDSDRDDSGRAQAASGSAVEYEISEESR 120
Query: 1869 XXXXXXR-AMQDFLMKRRAAALAVPTNDMAVRTRLRRLGEPITLFGXXXXXXXXXXXXXM 1693
A Q+FLMKRRA+ALAVPTNDMAVRTRLRRLGEPITLFG M
Sbjct: 121 QFRERQEKAKQEFLMKRRASALAVPTNDMAVRTRLRRLGEPITLFGEREMERRDRLRMIM 180
Query: 1692 AKLDSEGQLEKLMKVHEQEEAAASVSMSEGPEEEMVQYPFYTEGSRTLLESRVEIAKYSI 1513
AKLD+EGQLEKLMK HE+EEAAA V+M E EEE +QYPFYTEGS++LLE+RVEIAKYSI
Sbjct: 181 AKLDAEGQLEKLMKAHEEEEAAAPVAMEE-VEEETLQYPFYTEGSKSLLEARVEIAKYSI 239
Query: 1512 VRAAMRLQRARRKRDDPDEDLDAETNWALDQAGSLALDCSEIGDDRPLSGCSFSHDGKML 1333
RAA RL RARRKRDDPDEDLDAE +W L +AGSL LDCSEIGDDRPLSGCSFSHDGK+L
Sbjct: 240 KRAASRLYRARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDDRPLSGCSFSHDGKLL 299
Query: 1332 ATCALSGVAKIWSMPQVKKVCTLKGHTERATDVAFSPIDNHLATASADRTARLWNSEGCL 1153
A CALSGVAKIWSMPQV KV LKGHTERATDVAFSP NHLATASADRTARLWNSEG L
Sbjct: 300 AACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATASADRTARLWNSEGSL 359
Query: 1152 LKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGEELLLQEGHSRSIYGLSFHY 973
LKTFEGHLDRLARIAFHPSGKYLGT SFDKTWRLWDVETGEELLLQEGHSRS+YG+SFH
Sbjct: 360 LKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHSRSVYGISFHR 419
Query: 972 DGSLAASCGLDSLARVWDLRSGRSVLALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWD 793
DGSLAASCGLD+L RVWDLRSGRS+LALEGHVKPVLGI FSPNGYHLATG EDNTCRIWD
Sbjct: 420 DGSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHLATGAEDNTCRIWD 479
Query: 792 LRKKKSLYIIPAHANLISQVKFEPQEGYFLLTASYDMTAKVWSSRDFKPVKTLSGHEAKV 613
LRKKKSLY+IPAH+NL+SQVKFEPQEGYFL+TASYDMTAKVWS+RDFKPVKTLSGHEAKV
Sbjct: 480 LRKKKSLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKV 539
Query: 612 TSLDAV-DGHTVASVSHDRTIKLWSSRNYEKEKAMDVD 502
TSLD DGH +A+VSHDRTIKLWSS EKEKAMD+D
Sbjct: 540 TSLDITEDGHCIATVSHDRTIKLWSSAEIEKEKAMDID 577
>emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]
Length = 1088
Score = 776 bits (2003), Expect = 0.0
Identities = 408/590 (69%), Positives = 444/590 (75%), Gaps = 2/590 (0%)
Frame = -3
Query: 2265 STF*QPESVSSIMDIDEENSASTSLAEPSVAVPDSQTVGSAIDSIPAQLVQXXXXXXXXX 2086
+ F + ES + ++ + +EN S SLAEPS AV D QT S ID P +Q
Sbjct: 500 AAFFKEESSAGVIGLIQENPVSVSLAEPSAAVTDDQTPVSTIDPTPLPAMQPIIPSLVPP 559
Query: 2085 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNGGIKGXXXXXXXXXSGALRNTAG 1906
QNG ++ SG + +G
Sbjct: 560 PIVPPIAPIPSVSAPILRPLAPLPVRPPVLRPPLPQNGEMRASDSDSDRDDSGRAQAASG 619
Query: 1905 XXXXXXXXXXXXXXXXXXR-AMQDFLMKRRAAALAVPTNDMAVRTRLRRLGEPITLFGXX 1729
A Q+FLMKRRA+ALAVPTNDMAVRTRLRRLGEPITLFG
Sbjct: 620 SAVEYEISEESRQFRERQEKAKQEFLMKRRASALAVPTNDMAVRTRLRRLGEPITLFGER 679
Query: 1728 XXXXXXXXXXXMAKLDSEGQLEKLMKVHEQEEAAASVSMSEGPEEEMVQYPFYTEGSRTL 1549
MAKLD+EGQLEKLMK HE+EEAAA V+M E EEE +QYPFYTEGS++L
Sbjct: 680 EMERRDRLRMIMAKLDAEGQLEKLMKAHEEEEAAAPVAMEE-VEEETLQYPFYTEGSKSL 738
Query: 1548 LESRVEIAKYSIVRAAMRLQRARRKRDDPDEDLDAETNWALDQAGSLALDCSEIGDDRPL 1369
LE+RVEIAKYSI RAA RL RARRKRDDPDEDLDAE +W L +AGSL LDCSEIGDDRPL
Sbjct: 739 LEARVEIAKYSIKRAASRLYRARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDDRPL 798
Query: 1368 SGCSFSHDGKMLATCALSGVAKIWSMPQVKKVCTLKGHTERATDVAFSPIDNHLATASAD 1189
SGCSFSHDGK+LA CALSGVAKIWSMPQV KV LKGHTERATDVAFSP NHLATASAD
Sbjct: 799 SGCSFSHDGKLLAACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATASAD 858
Query: 1188 RTARLWNSEGCLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGEELLLQEG 1009
RTARLWNSEG LLKTFEGHLDRLARIAFHPSGKYLGT SFDKTWRLWDVETGEELLLQEG
Sbjct: 859 RTARLWNSEGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQEG 918
Query: 1008 HSRSIYGLSFHYDGSLAASCGLDSLARVWDLRSGRSVLALEGHVKPVLGISFSPNGYHLA 829
HSRS+YG+SFH DGSLAASCGLD+L RVWDLRSGRS+LALEGHVKPVLGI FSPNGYHLA
Sbjct: 919 HSRSVYGISFHRDGSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHLA 978
Query: 828 TGGEDNTCRIWDLRKKKSLYIIPAHANLISQVKFEPQEGYFLLTASYDMTAKVWSSRDFK 649
TG EDNTCRIWDLRKKKSLY+IPAH+NL+SQVKFEPQEGYFL+TASYDMTAKVWS+RDFK
Sbjct: 979 TGAEDNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDFK 1038
Query: 648 PVKTLSGHEAKVTSLDAV-DGHTVASVSHDRTIKLWSSRNYEKEKAMDVD 502
PVKTLSGHEAKVTSLD DGH +A+VSHDRTIKLWSS EKEKAMD+D
Sbjct: 1039 PVKTLSGHEAKVTSLDITEDGHCIATVSHDRTIKLWSSAEIEKEKAMDID 1088
>ref|XP_002308919.1| predicted protein [Populus trichocarpa] gi|222854895|gb|EEE92442.1|
predicted protein [Populus trichocarpa]
Length = 548
Score = 725 bits (1871), Expect = 0.0
Identities = 356/450 (79%), Positives = 406/450 (90%), Gaps = 1/450 (0%)
Frame = -3
Query: 1848 AMQDFLMKRRAAALAVPTNDMAVRTRLRRLGEPITLFGXXXXXXXXXXXXXMAKLDSEGQ 1669
AMQ+F+MK+RAAALAVPTNDMAVRTRLRRLGEPITLFG MAKLDSEGQ
Sbjct: 101 AMQEFMMKKRAAALAVPTNDMAVRTRLRRLGEPITLFGEREMERRDRLRMLMAKLDSEGQ 160
Query: 1668 LEKLMKVHEQEEAAASVSMSEGPEEEMVQYPFYTEGSRTLLESRVEIAKYSIVRAAMRLQ 1489
LEKLMKVHE+EEAA S + +E EEE VQYPFYTEGS+ LL++R++IAKYSI +AA+RLQ
Sbjct: 161 LEKLMKVHEEEEAA-STAAAEDAEEEFVQYPFYTEGSKELLDARIDIAKYSISKAALRLQ 219
Query: 1488 RARRKRDDPDEDLDAETNWALDQAGSLALDCSEIGDDRPLSGCSFSHDGKMLATCALSGV 1309
RARRKRDDPDED DAE +W+L+QA SL+L+CSE+GDDRPLSGCSFS DG+MLATC+LSGV
Sbjct: 220 RARRKRDDPDEDEDAEIDWSLNQAESLSLNCSELGDDRPLSGCSFSCDGEMLATCSLSGV 279
Query: 1308 AKIWSMPQVKKVCTLKGHTERATDVAFSPIDNHLATASADRTARLWNSEGCLLKTFEGHL 1129
AKIWS+PQV KV LKGH ERATDVAFSP+ NHLATASADRTARLWN++G LL FEGHL
Sbjct: 280 AKIWSVPQVTKVSNLKGHMERATDVAFSPVHNHLATASADRTARLWNTDGSLLMKFEGHL 339
Query: 1128 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGEELLLQEGHSRSIYGLSFHYDGSLAASC 949
DRLAR+AFHPSGKYLGTTSFDKTWRLWD+++G ELLLQEGHSRSIYG++FH+DGSLAASC
Sbjct: 340 DRLARVAFHPSGKYLGTTSFDKTWRLWDIDSGVELLLQEGHSRSIYGIAFHHDGSLAASC 399
Query: 948 GLDSLARVWDLRSGRSVLALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSLY 769
GLD+LARVWDLR+GRS++A EGHVKP+LGISFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 400 GLDALARVWDLRTGRSIMAFEGHVKPLLGISFSPNGYHLATGGEDNTCRIWDLRKKKSLY 459
Query: 768 IIPAHANLISQVKFEPQEGYFLLTASYDMTAKVWSSRDFKPVKTLSGHEAKVTSLD-AVD 592
+IPAH+NL+SQVKFEPQEGY+L+T+SYDMTAKVWS RDFK VKTLS HEAKVTSLD + D
Sbjct: 460 VIPAHSNLVSQVKFEPQEGYYLVTSSYDMTAKVWSGRDFKHVKTLSAHEAKVTSLDISAD 519
Query: 591 GHTVASVSHDRTIKLWSSRNYEKEKAMDVD 502
G +A+VSHDRTIKLWSSR+ EK+ AM+V+
Sbjct: 520 GRLIATVSHDRTIKLWSSRSNEKD-AMEVE 548
>ref|XP_004162536.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
protein-like [Cucumis sativus]
Length = 568
Score = 718 bits (1853), Expect = 0.0
Identities = 354/450 (78%), Positives = 401/450 (89%), Gaps = 1/450 (0%)
Frame = -3
Query: 1848 AMQDFLMKRRAAALAVPTNDMAVRTRLRRLGEPITLFGXXXXXXXXXXXXXMAKLDSEGQ 1669
AMQ+FLMKRRA+ALAVPTNDMAVR RLRRLGEPITLFG MA+LD+EGQ
Sbjct: 121 AMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQ 180
Query: 1668 LEKLMKVHEQEEAAASVSMSEGPEEEMVQYPFYTEGSRTLLESRVEIAKYSIVRAAMRLQ 1489
LEKLMKVHE+EEAAA+ E EEE++QYPFYTEGS+ LL++R++IAKYSI+RA+ RL+
Sbjct: 181 LEKLMKVHEEEEAAATGGTEEA-EEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 239
Query: 1488 RARRKRDDPDEDLDAETNWALDQAGSLALDCSEIGDDRPLSGCSFSHDGKMLATCALSGV 1309
RA+RKRDDPDED++AE +WAL QA SL LDCSEIGDDRPLSGCSFS DGK LAT +LSGV
Sbjct: 240 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 299
Query: 1308 AKIWSMPQVKKVCTLKGHTERATDVAFSPIDNHLATASADRTARLWNSEGCLLKTFEGHL 1129
AK+WSMPQV+KV KGHTER TDV FSP++ LATASADRTARLW++EG LLKTFEGHL
Sbjct: 300 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 359
Query: 1128 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGEELLLQEGHSRSIYGLSFHYDGSLAASC 949
DRLARIAFHPSGKYLGTTSFDKTWRLWDVETG ELLLQEGHSRS+YG++FH+DGSL +SC
Sbjct: 360 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 419
Query: 948 GLDSLARVWDLRSGRSVLALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSLY 769
GLD+LARVWDLR+GRSVLALEGHVKPVLG+SFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 420 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 479
Query: 768 IIPAHANLISQVKFEPQEGYFLLTASYDMTAKVWSSRDFKPVKTLSGHEAKVTSLDAV-D 592
IIPAH+NL+SQVK+EPQEGYFL+TAS+DMTAK+WS+RDFKPVKTLSGHEAKVTSLD + D
Sbjct: 480 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 539
Query: 591 GHTVASVSHDRTIKLWSSRNYEKEKAMDVD 502
G +A+VSHDRTIKLWS N + + MDVD
Sbjct: 540 GQCIATVSHDRTIKLWSV-NSKDIQTMDVD 568
>ref|XP_004146749.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
protein-like [Cucumis sativus]
Length = 569
Score = 718 bits (1853), Expect = 0.0
Identities = 354/450 (78%), Positives = 401/450 (89%), Gaps = 1/450 (0%)
Frame = -3
Query: 1848 AMQDFLMKRRAAALAVPTNDMAVRTRLRRLGEPITLFGXXXXXXXXXXXXXMAKLDSEGQ 1669
AMQ+FLMKRRA+ALAVPTNDMAVR RLRRLGEPITLFG MA+LD+EGQ
Sbjct: 122 AMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQ 181
Query: 1668 LEKLMKVHEQEEAAASVSMSEGPEEEMVQYPFYTEGSRTLLESRVEIAKYSIVRAAMRLQ 1489
LEKLMKVHE+EEAAA+ E EEE++QYPFYTEGS+ LL++R++IAKYSI+RA+ RL+
Sbjct: 182 LEKLMKVHEEEEAAATGGTEEA-EEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240
Query: 1488 RARRKRDDPDEDLDAETNWALDQAGSLALDCSEIGDDRPLSGCSFSHDGKMLATCALSGV 1309
RA+RKRDDPDED++AE +WAL QA SL LDCSEIGDDRPLSGCSFS DGK LAT +LSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
Query: 1308 AKIWSMPQVKKVCTLKGHTERATDVAFSPIDNHLATASADRTARLWNSEGCLLKTFEGHL 1129
AK+WSMPQV+KV KGHTER TDV FSP++ LATASADRTARLW++EG LLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360
Query: 1128 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGEELLLQEGHSRSIYGLSFHYDGSLAASC 949
DRLARIAFHPSGKYLGTTSFDKTWRLWDVETG ELLLQEGHSRS+YG++FH+DGSL +SC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
Query: 948 GLDSLARVWDLRSGRSVLALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSLY 769
GLD+LARVWDLR+GRSVLALEGHVKPVLG+SFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
Query: 768 IIPAHANLISQVKFEPQEGYFLLTASYDMTAKVWSSRDFKPVKTLSGHEAKVTSLDAV-D 592
IIPAH+NL+SQVK+EPQEGYFL+TAS+DMTAK+WS+RDFKPVKTLSGHEAKVTSLD + D
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
Query: 591 GHTVASVSHDRTIKLWSSRNYEKEKAMDVD 502
G +A+VSHDRTIKLWS N + + MDVD
Sbjct: 541 GQCIATVSHDRTIKLWSV-NSKDIQTMDVD 569