BLASTX nr result
ID: Panax21_contig00017077
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00017077
(1374 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like... 682 0.0
gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis] 670 0.0
ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like... 667 0.0
ref|XP_002312063.1| predicted protein [Populus trichocarpa] gi|2... 666 0.0
ref|XP_002315251.1| predicted protein [Populus trichocarpa] gi|2... 662 0.0
>ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
Length = 1214
Score = 682 bits (1760), Expect = 0.0
Identities = 346/368 (94%), Positives = 355/368 (96%)
Frame = -2
Query: 1106 PDVRAVIPRRADLPAERGVLIVSAAMHKQKSMFFFLLQTEYGDVFKVTLEHDNERVSELK 927
PDVRAVIPRRADLPAERGVLIVSAA H+QKSMFFFLLQTEYGDVFKVTLEH+N+R+SELK
Sbjct: 263 PDVRAVIPRRADLPAERGVLIVSAATHRQKSMFFFLLQTEYGDVFKVTLEHENDRISELK 322
Query: 926 IKYFDTIPVTSSLCVLKSGFLFAASEFGNHGLYQFQAIGDDPDVXXXXXXXXXXXEGFQP 747
IKYFDTIPVTSS+CVLKSGFLFAASEFGNHGLYQFQAIGDD DV EGFQP
Sbjct: 323 IKYFDTIPVTSSMCVLKSGFLFAASEFGNHGLYQFQAIGDDADVESSSASLMETEEGFQP 382
Query: 746 VFFQPRGLKNLVRIDQVESLMPIMDMKVSNLFEEETPQIFSLCGRGPRSSLRILRPGLAI 567
VFFQPRGLKNLVRIDQVESLMPIMDMKVSNLFEEETPQIF+LCGRGPRSS+RILRPGLAI
Sbjct: 383 VFFQPRGLKNLVRIDQVESLMPIMDMKVSNLFEEETPQIFALCGRGPRSSIRILRPGLAI 442
Query: 566 SEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTP 387
SEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTP
Sbjct: 443 SEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTP 502
Query: 386 SLAVSLIGDDSLMQVHPTGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELI 207
SLAVSLIGDDSLMQVHP+GIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELI
Sbjct: 503 SLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELI 562
Query: 206 YFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCM 27
YFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCM
Sbjct: 563 YFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCM 622
Query: 26 QILSLQSV 3
QILS+QSV
Sbjct: 623 QILSVQSV 630
Score = 99.8 bits (247), Expect = 2e-18
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -1
Query: 1374 EADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTV 1231
EADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTV
Sbjct: 190 EADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTV 237
>gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
Length = 1212
Score = 670 bits (1728), Expect = 0.0
Identities = 339/368 (92%), Positives = 351/368 (95%)
Frame = -2
Query: 1106 PDVRAVIPRRADLPAERGVLIVSAAMHKQKSMFFFLLQTEYGDVFKVTLEHDNERVSELK 927
PDVRAVIPRR DLPAERGVLIVSAAMHKQKSMFFFLLQTEYGD+FKVTL+HDN+RV+EL+
Sbjct: 263 PDVRAVIPRRYDLPAERGVLIVSAAMHKQKSMFFFLLQTEYGDIFKVTLDHDNDRVTELR 322
Query: 926 IKYFDTIPVTSSLCVLKSGFLFAASEFGNHGLYQFQAIGDDPDVXXXXXXXXXXXEGFQP 747
IKYFDTIPVT+SLCVLKSGFLFAASEFGNH LYQFQAIGD+PDV EGFQP
Sbjct: 323 IKYFDTIPVTASLCVLKSGFLFAASEFGNHALYQFQAIGDEPDVESSSATLMETEEGFQP 382
Query: 746 VFFQPRGLKNLVRIDQVESLMPIMDMKVSNLFEEETPQIFSLCGRGPRSSLRILRPGLAI 567
VFFQPR LKNLVRIDQVESLMPIMDMK+ NLFEEETPQIF+LCGRGPRSSLRILRPGLAI
Sbjct: 383 VFFQPRRLKNLVRIDQVESLMPIMDMKIINLFEEETPQIFTLCGRGPRSSLRILRPGLAI 442
Query: 566 SEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTP 387
SEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTP
Sbjct: 443 SEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTP 502
Query: 386 SLAVSLIGDDSLMQVHPTGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELI 207
SLAVSLIGDDSLMQVHP+GIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGE+I
Sbjct: 503 SLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGEII 562
Query: 206 YFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCM 27
YFEVDMTGQLMEVEK EMSGDVACLDIAPVPEGRQRSRFLAVGSYDN IRILSLDPDDCM
Sbjct: 563 YFEVDMTGQLMEVEKQEMSGDVACLDIAPVPEGRQRSRFLAVGSYDNCIRILSLDPDDCM 622
Query: 26 QILSLQSV 3
Q+LSLQSV
Sbjct: 623 QVLSLQSV 630
Score = 98.6 bits (244), Expect = 3e-18
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -1
Query: 1374 EADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTV 1231
EADQDSTGQAA+EAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTV
Sbjct: 190 EADQDSTGQAAAEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTV 237
>ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
gi|449513493|ref|XP_004164340.1| PREDICTED: splicing
factor 3B subunit 3-like [Cucumis sativus]
Length = 1214
Score = 667 bits (1721), Expect = 0.0
Identities = 337/368 (91%), Positives = 350/368 (95%)
Frame = -2
Query: 1106 PDVRAVIPRRADLPAERGVLIVSAAMHKQKSMFFFLLQTEYGDVFKVTLEHDNERVSELK 927
PDVRAVIPRRADLPAERGVLIVSAAMHKQK+MFFFLLQTEYGD+FKVTLEH+N+ V ELK
Sbjct: 263 PDVRAVIPRRADLPAERGVLIVSAAMHKQKTMFFFLLQTEYGDIFKVTLEHNNDSVKELK 322
Query: 926 IKYFDTIPVTSSLCVLKSGFLFAASEFGNHGLYQFQAIGDDPDVXXXXXXXXXXXEGFQP 747
IKYFDTIPVT+S+CVLKSGFLFAASEFGNH LYQFQAIG+D DV EGFQP
Sbjct: 323 IKYFDTIPVTASMCVLKSGFLFAASEFGNHSLYQFQAIGEDADVESSSATLMETEEGFQP 382
Query: 746 VFFQPRGLKNLVRIDQVESLMPIMDMKVSNLFEEETPQIFSLCGRGPRSSLRILRPGLAI 567
VFFQPR LKNL+RIDQVESLMPIMDMK+ NLFEEETPQIF+LCGRGPRSSLRILRPGLAI
Sbjct: 383 VFFQPRRLKNLMRIDQVESLMPIMDMKIINLFEEETPQIFTLCGRGPRSSLRILRPGLAI 442
Query: 566 SEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTP 387
SEMAVS+LPGVPSAVWTVKKN+NDEFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTP
Sbjct: 443 SEMAVSELPGVPSAVWTVKKNINDEFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTP 502
Query: 386 SLAVSLIGDDSLMQVHPTGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELI 207
SLAVSLIGDDSLMQVHP GIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELI
Sbjct: 503 SLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELI 562
Query: 206 YFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCM 27
YFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCM
Sbjct: 563 YFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCM 622
Query: 26 QILSLQSV 3
QILS+QSV
Sbjct: 623 QILSVQSV 630
Score = 94.7 bits (234), Expect = 5e-17
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = -1
Query: 1374 EADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTV 1231
EADQDSTG AASEAQKHLTFYELDLGLNHVSRKWSE VDNGANMLVTV
Sbjct: 190 EADQDSTGVAASEAQKHLTFYELDLGLNHVSRKWSEPVDNGANMLVTV 237
>ref|XP_002312063.1| predicted protein [Populus trichocarpa] gi|222851883|gb|EEE89430.1|
predicted protein [Populus trichocarpa]
Length = 1213
Score = 666 bits (1719), Expect = 0.0
Identities = 334/368 (90%), Positives = 350/368 (95%)
Frame = -2
Query: 1106 PDVRAVIPRRADLPAERGVLIVSAAMHKQKSMFFFLLQTEYGDVFKVTLEHDNERVSELK 927
PDVRAVIPRRADLPAERGVLIVSAA HKQKSMFFFLLQTEYGD+FKVTL+H+N++V ELK
Sbjct: 263 PDVRAVIPRRADLPAERGVLIVSAATHKQKSMFFFLLQTEYGDIFKVTLDHENDKVKELK 322
Query: 926 IKYFDTIPVTSSLCVLKSGFLFAASEFGNHGLYQFQAIGDDPDVXXXXXXXXXXXEGFQP 747
IKYFDTIPVTSS+CVLKSGFLFAASEFGNH LYQFQAIG++ DV EGFQP
Sbjct: 323 IKYFDTIPVTSSICVLKSGFLFAASEFGNHALYQFQAIGEEEDVEASSATLMETEEGFQP 382
Query: 746 VFFQPRGLKNLVRIDQVESLMPIMDMKVSNLFEEETPQIFSLCGRGPRSSLRILRPGLAI 567
VFFQPRGLKNLVRIDQVESLMP+MDMKV+N+F+EETPQIFSLCGRGPRSSLRILRPGLAI
Sbjct: 383 VFFQPRGLKNLVRIDQVESLMPVMDMKVANIFDEETPQIFSLCGRGPRSSLRILRPGLAI 442
Query: 566 SEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTP 387
SEMAVSQLPGVPSAVWTVK+N NDEFDAYIVVSF NATLVLSIGETVEEVSDSGFLDTTP
Sbjct: 443 SEMAVSQLPGVPSAVWTVKRNANDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTP 502
Query: 386 SLAVSLIGDDSLMQVHPTGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELI 207
SLAVSLIGDDSLMQ+HP GIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELI
Sbjct: 503 SLAVSLIGDDSLMQIHPNGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELI 562
Query: 206 YFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCM 27
YFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDNTIR+LSLDPDDCM
Sbjct: 563 YFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDNTIRVLSLDPDDCM 622
Query: 26 QILSLQSV 3
QILS+QSV
Sbjct: 623 QILSVQSV 630
Score = 95.5 bits (236), Expect = 3e-17
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = -1
Query: 1374 EADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTV 1231
EADQDSTGQAA EAQK+LTFYELDLGLNHVSRKWSEQVDNGANMLVTV
Sbjct: 190 EADQDSTGQAAGEAQKNLTFYELDLGLNHVSRKWSEQVDNGANMLVTV 237
>ref|XP_002315251.1| predicted protein [Populus trichocarpa] gi|222864291|gb|EEF01422.1|
predicted protein [Populus trichocarpa]
Length = 1213
Score = 662 bits (1708), Expect = 0.0
Identities = 334/368 (90%), Positives = 348/368 (94%)
Frame = -2
Query: 1106 PDVRAVIPRRADLPAERGVLIVSAAMHKQKSMFFFLLQTEYGDVFKVTLEHDNERVSELK 927
PDVRAVIPRRADLPAERGVLIVSAA HKQKSMFFFLLQTEYGD+FKV L+H+N++V ELK
Sbjct: 263 PDVRAVIPRRADLPAERGVLIVSAATHKQKSMFFFLLQTEYGDIFKVMLDHENDKVKELK 322
Query: 926 IKYFDTIPVTSSLCVLKSGFLFAASEFGNHGLYQFQAIGDDPDVXXXXXXXXXXXEGFQP 747
IKYFDTIPVTSS+CVLKSGFLFAASEFGNH LYQFQAIG++ DV EGFQP
Sbjct: 323 IKYFDTIPVTSSMCVLKSGFLFAASEFGNHALYQFQAIGEEEDVEASSATLMETEEGFQP 382
Query: 746 VFFQPRGLKNLVRIDQVESLMPIMDMKVSNLFEEETPQIFSLCGRGPRSSLRILRPGLAI 567
VFFQPRGLKNLVRIDQVESLMPIMDMKV+NLF+EETPQIFSLCGRGPRSSLRILRPGLAI
Sbjct: 383 VFFQPRGLKNLVRIDQVESLMPIMDMKVANLFDEETPQIFSLCGRGPRSSLRILRPGLAI 442
Query: 566 SEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTP 387
SEMAVSQLPGVPSAVWTVKKN+ DEFDAYIVVSF NATLVLSIGETVEEVSDSGFLDTTP
Sbjct: 443 SEMAVSQLPGVPSAVWTVKKNIYDEFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTP 502
Query: 386 SLAVSLIGDDSLMQVHPTGIRHIREDGRINEWRTPGKRTIVKVGSNRLQVVIALSGGELI 207
SLAVSLIGDDSLMQ+HP GIRHIREDGRINEWRTP KRTIVKVGSNRLQVVIALSGGELI
Sbjct: 503 SLAVSLIGDDSLMQIHPNGIRHIREDGRINEWRTPAKRTIVKVGSNRLQVVIALSGGELI 562
Query: 206 YFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCM 27
YFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDNTIR+LSLDPDDCM
Sbjct: 563 YFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDNTIRVLSLDPDDCM 622
Query: 26 QILSLQSV 3
QILS+QSV
Sbjct: 623 QILSVQSV 630
Score = 95.9 bits (237), Expect = 2e-17
Identities = 46/48 (95%), Positives = 48/48 (100%)
Frame = -1
Query: 1374 EADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTV 1231
EADQDSTGQ+ASEAQK+LTFYELDLGLNHVSRKWSEQVDNGANMLVTV
Sbjct: 190 EADQDSTGQSASEAQKNLTFYELDLGLNHVSRKWSEQVDNGANMLVTV 237