BLASTX nr result

ID: Panax21_contig00017065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017065
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533116.1| pentatricopeptide repeat-containing protein,...   187   2e-45
emb|CBI22241.3| unnamed protein product [Vitis vinifera]              181   1e-43
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...   181   1e-43
ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|2...   175   9e-42
ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containi...   163   3e-38

>ref|XP_002533116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527079|gb|EEF29261.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1204

 Score =  187 bits (474), Expect = 2e-45
 Identities = 104/206 (50%), Positives = 137/206 (66%), Gaps = 1/206 (0%)
 Frame = +3

Query: 84   ASVLYDVIFAKNLAPKFDVPVQLIPELCRAHDLKKIVYLKESILREQPLVSLSVH-DLMS 260
            AS +   + A+NL P  DV V LIP+LC+A  L   + L++  LREQ +  LSV   L+ 
Sbjct: 716  ASTMAGEVLARNLVPCLDVSVILIPQLCKADRLDIAIALRDISLREQSVSQLSVDCALVK 775

Query: 261  GFCKTGMVGEAAMLLQDMLLKGICPDVEVYNILLQGHCRSKNFRKVLELLGFLIRKSIHI 440
            GFCKTG +GEAA +LQ+MLLKG+ PD E+YN+L QG+C++ N++KV ELL  LIRK +  
Sbjct: 776  GFCKTGKIGEAANMLQNMLLKGLLPDAEIYNMLFQGYCQANNWKKVRELLSVLIRKFLSP 835

Query: 441  STLSYRNLVSLMCMEGKISSALSVKEFMLKESKPSYVFIYNILIFFIFSHLETV*LWIYI 620
            S  SY+NL  LMCM G  +SALS+K  ML+ S+   + IYNILIF + S      L +  
Sbjct: 836  SVSSYQNLARLMCMHGSFTSALSLKVLMLENSRYDSLVIYNILIFHLLSAGNC--LHVVR 893

Query: 621  VLKEFQERELQLDEATYNFVVYKISK 698
            VL E QE+ L L+E TYNF+VY  SK
Sbjct: 894  VLDELQEKGLLLNEVTYNFLVYGFSK 919


>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score =  181 bits (460), Expect = 1e-43
 Identities = 91/202 (45%), Positives = 136/202 (67%), Gaps = 1/202 (0%)
 Frame = +3

Query: 84   ASVLYDVIFAKNLAPKFDVPVQLIPELCRAHDLKKIVYLKESILREQPLVSLSVHD-LMS 260
            A  +++ + AKNL P  D  + LIP+LCRA+ ++K + LK+  LREQ + S SVH  LM+
Sbjct: 778  AFTIFESMQAKNLVPCLDASILLIPQLCRANRVEKAIALKDLSLREQSIDSFSVHSALMN 837

Query: 261  GFCKTGMVGEAAMLLQDMLLKGICPDVEVYNILLQGHCRSKNFRKVLELLGFLIRKSIHI 440
            GFCKTG +GEAA+L QDM   G+ PD+E+ N+L+ G+C++ + RKV EL+G +IRK +  
Sbjct: 838  GFCKTGRIGEAAILFQDMFSNGLLPDIEICNMLVFGYCQANSVRKVTELIGVMIRKDLGF 897

Query: 441  STLSYRNLVSLMCMEGKISSALSVKEFMLKESKPSYVFIYNILIFFIFSHLETV*LWIYI 620
            S   YRN+V L+CM G +   L +KE ML+E+   ++ +YNILI+ +F    +  L + +
Sbjct: 898  SISVYRNVVRLLCMNGMVLPLLRMKELMLRENNFPHLIVYNILIYHLFQTGNS--LLVKV 955

Query: 621  VLKEFQERELQLDEATYNFVVY 686
            +L E  ++ L  DE TYNF+VY
Sbjct: 956  ILGELHKKGLLFDEVTYNFLVY 977


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Vitis vinifera]
          Length = 1273

 Score =  181 bits (460), Expect = 1e-43
 Identities = 91/202 (45%), Positives = 136/202 (67%), Gaps = 1/202 (0%)
 Frame = +3

Query: 84   ASVLYDVIFAKNLAPKFDVPVQLIPELCRAHDLKKIVYLKESILREQPLVSLSVHD-LMS 260
            A  +++ + AKNL P  D  + LIP+LCRA+ ++K + LK+  LREQ + S SVH  LM+
Sbjct: 795  AFTIFESMQAKNLVPCLDASILLIPQLCRANRVEKAIALKDLSLREQSIDSFSVHSALMN 854

Query: 261  GFCKTGMVGEAAMLLQDMLLKGICPDVEVYNILLQGHCRSKNFRKVLELLGFLIRKSIHI 440
            GFCKTG +GEAA+L QDM   G+ PD+E+ N+L+ G+C++ + RKV EL+G +IRK +  
Sbjct: 855  GFCKTGRIGEAAILFQDMFSNGLLPDIEICNMLVFGYCQANSVRKVTELIGVMIRKDLGF 914

Query: 441  STLSYRNLVSLMCMEGKISSALSVKEFMLKESKPSYVFIYNILIFFIFSHLETV*LWIYI 620
            S   YRN+V L+CM G +   L +KE ML+E+   ++ +YNILI+ +F    +  L + +
Sbjct: 915  SISVYRNVVRLLCMNGMVLPLLRMKELMLRENNFPHLIVYNILIYHLFQTGNS--LLVKV 972

Query: 621  VLKEFQERELQLDEATYNFVVY 686
            +L E  ++ L  DE TYNF+VY
Sbjct: 973  ILGELHKKGLLFDEVTYNFLVY 994


>ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|222866871|gb|EEF04002.1|
            predicted protein [Populus trichocarpa]
          Length = 1158

 Score =  175 bits (443), Expect = 9e-42
 Identities = 93/206 (45%), Positives = 136/206 (66%), Gaps = 1/206 (0%)
 Frame = +3

Query: 84   ASVLYDVIFAKNLAPKFDVPVQLIPELCRAHDLKKIVYLKESILREQPLVSLSVH-DLMS 260
            A  + D++ A+ + P  DV + LIP+LC+A  L+  + L E++LR    V  + H D   
Sbjct: 680  AFAVLDIMLARKMVPCLDVSLILIPQLCKADKLQTAIELMENVLR----VRTTFHSDFTK 735

Query: 261  GFCKTGMVGEAAMLLQDMLLKGICPDVEVYNILLQGHCRSKNFRKVLELLGFLIRKSIHI 440
             FC TG  GEAA + Q+ML KG+ PD ++YN+LLQ  C +KN +KV ELLG +IRK+  +
Sbjct: 736  RFCVTGKAGEAANIFQNMLSKGLLPDADIYNMLLQQFCHTKNLKKVRELLGVVIRKTASL 795

Query: 441  STLSYRNLVSLMCMEGKISSALSVKEFMLKESKPSYVFIYNILIFFIFSHLETV*LWIYI 620
            +  SYR+ V LMC+EGK+  ALS+K+ M++ESK + + +YNILIF++ +  E+  + +  
Sbjct: 796  TISSYRSYVRLMCLEGKVDYALSLKKVMVQESKSASIILYNILIFYLLTAGES--MHVKK 853

Query: 621  VLKEFQERELQLDEATYNFVVYKISK 698
            VL E QE  L L+E TYNF+VY  SK
Sbjct: 854  VLNELQEEGLVLNEVTYNFLVYGFSK 879


>ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Glycine max]
          Length = 1186

 Score =  163 bits (413), Expect = 3e-38
 Identities = 89/202 (44%), Positives = 128/202 (63%), Gaps = 1/202 (0%)
 Frame = +3

Query: 84   ASVLYDVIFAKNLAPKFDVPVQLIPELCRAHDLKKIVYLKESILREQPLVSLSVH-DLMS 260
            A  + D +  ++LAP  DV V LIP+LC+AH   K + LK+ IL+EQP  S +    L+ 
Sbjct: 711  AFTVLDDMLDRSLAPCLDVSVLLIPQLCKAHRYDKAIALKDIILKEQPSFSHAADCALIC 770

Query: 261  GFCKTGMVGEAAMLLQDMLLKGICPDVEVYNILLQGHCRSKNFRKVLELLGFLIRKSIHI 440
            GFC  G  G+A  L +DML KG+ PD E+ NI++QGHC   + RKV ELLGF IRK   +
Sbjct: 771  GFCNMGSTGKADTLFRDMLSKGLTPDDELCNIIIQGHCHVNDLRKVGELLGFAIRKDWEL 830

Query: 441  STLSYRNLVSLMCMEGKISSALSVKEFMLKESKPSYVFIYNILIFFIFSHLETV*LWIYI 620
            S  SY+NLV L+C +G++  ALS+K  ML +     + IYNIL+F++     +  L +  
Sbjct: 831  SLTSYKNLVRLVCRKGRVQFALSLKNLMLAQCPLDGLIIYNILMFYLLKDGNS--LDVNK 888

Query: 621  VLKEFQERELQLDEATYNFVVY 686
            +L E +E+++ LDE  +NF+VY
Sbjct: 889  ILTEMEEKKVVLDEVGHNFLVY 910


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