BLASTX nr result

ID: Panax21_contig00017056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017056
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300793.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-32
ref|XP_002307634.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-32
ref|XP_002521000.1| ribokinase, putative [Ricinus communis] gi|2...   122   7e-31
emb|CAN75725.1| hypothetical protein VITISV_031405 [Vitis vinifera]   120   1e-30
ref|XP_002275742.1| PREDICTED: 5-dehydro-2-deoxygluconokinase [V...   120   1e-30

>ref|XP_002300793.1| predicted protein [Populus trichocarpa] gi|222842519|gb|EEE80066.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  127 bits (318), Expect(2) = 1e-32
 Identities = 62/76 (81%), Positives = 69/76 (90%)
 Frame = -1

Query: 228 MVGMSEQDLIGNSSSSAYETLLFWVLVDPLQRHGFCSRANFSKEPAFSWMVKLSTEVKMS 49
           MVGMSE D I +SSS++YETLL WVLVDPLQRHGFCSRA+FSKEPAFSWM KLS EVK++
Sbjct: 38  MVGMSEDDDIVDSSSASYETLLCWVLVDPLQRHGFCSRADFSKEPAFSWMSKLSGEVKVA 97

Query: 48  IKQSKILFYNGYGFDE 1
           IKQSKILF NG+GFDE
Sbjct: 98  IKQSKILFCNGFGFDE 113



 Score = 38.1 bits (87), Expect(2) = 1e-32
 Identities = 18/26 (69%), Positives = 19/26 (73%)
 Frame = -3

Query: 310 HYKIIGHVGDEIYGNFLSDVLCKEGI 233
           H   IGHVGDEIYG FL DVL +E I
Sbjct: 11  HCATIGHVGDEIYGQFLLDVLREERI 36


>ref|XP_002307634.1| predicted protein [Populus trichocarpa] gi|222857083|gb|EEE94630.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  123 bits (308), Expect(2) = 2e-32
 Identities = 59/77 (76%), Positives = 68/77 (88%)
 Frame = -1

Query: 231 SMVGMSEQDLIGNSSSSAYETLLFWVLVDPLQRHGFCSRANFSKEPAFSWMVKLSTEVKM 52
           SMVGMSE   I +SS+++YETLL WVLVDPLQRHGFCSRA+F ++PAFSWM KL+ EVKM
Sbjct: 89  SMVGMSEDGDIVDSSNASYETLLCWVLVDPLQRHGFCSRADFCEDPAFSWMTKLTEEVKM 148

Query: 51  SIKQSKILFYNGYGFDE 1
           +IKQSKILF NGYGFDE
Sbjct: 149 AIKQSKILFCNGYGFDE 165



 Score = 41.2 bits (95), Expect(2) = 2e-32
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = -3

Query: 310 HYKIIGHVGDEIYGNFLSDVLCKEGI 233
           H   IGHVGDEIYG FL DVL +EGI
Sbjct: 63  HCATIGHVGDEIYGQFLLDVLREEGI 88


>ref|XP_002521000.1| ribokinase, putative [Ricinus communis] gi|223539837|gb|EEF41417.1|
           ribokinase, putative [Ricinus communis]
          Length = 474

 Score =  122 bits (305), Expect(2) = 7e-31
 Identities = 58/77 (75%), Positives = 68/77 (88%)
 Frame = -1

Query: 231 SMVGMSEQDLIGNSSSSAYETLLFWVLVDPLQRHGFCSRANFSKEPAFSWMVKLSTEVKM 52
           +MVGMS+     +SSS++YETLL WVLVDPLQRHGFCSRA+F+KEPAFSWM KLS +VKM
Sbjct: 161 TMVGMSDNTDAIDSSSASYETLLCWVLVDPLQRHGFCSRADFTKEPAFSWMSKLSAKVKM 220

Query: 51  SIKQSKILFYNGYGFDE 1
           +IKQSK+LF NGYGFDE
Sbjct: 221 AIKQSKVLFCNGYGFDE 237



 Score = 37.0 bits (84), Expect(2) = 7e-31
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = -3

Query: 298 IGHVGDEIYGNFLSDVLCKEGI 233
           IGHVG+EIYG FL DVL  EGI
Sbjct: 139 IGHVGNEIYGKFLLDVLRDEGI 160


>emb|CAN75725.1| hypothetical protein VITISV_031405 [Vitis vinifera]
          Length = 1456

 Score =  120 bits (301), Expect(2) = 1e-30
 Identities = 57/75 (76%), Positives = 67/75 (89%)
 Frame = -1

Query: 225 VGMSEQDLIGNSSSSAYETLLFWVLVDPLQRHGFCSRANFSKEPAFSWMVKLSTEVKMSI 46
           VGM+E   + +S+S++YETLL WVLVDPLQRHGFCSRA+FSKEPAFSWM KLS EVKM+I
Sbjct: 178 VGMNEDTDVVDSASASYETLLCWVLVDPLQRHGFCSRADFSKEPAFSWMSKLSREVKMAI 237

Query: 45  KQSKILFYNGYGFDE 1
           ++SKILF NGYGFDE
Sbjct: 238 RKSKILFCNGYGFDE 252



 Score = 37.4 bits (85), Expect(2) = 1e-30
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -3

Query: 298 IGHVGDEIYGNFLSDVLCKEGI 233
           IGHVG+EIYG+FL DVL  EGI
Sbjct: 154 IGHVGNEIYGDFLLDVLHDEGI 175


>ref|XP_002275742.1| PREDICTED: 5-dehydro-2-deoxygluconokinase [Vitis vinifera]
           gi|297735518|emb|CBI17958.3| unnamed protein product
           [Vitis vinifera]
          Length = 459

 Score =  120 bits (301), Expect(2) = 1e-30
 Identities = 57/75 (76%), Positives = 67/75 (89%)
 Frame = -1

Query: 225 VGMSEQDLIGNSSSSAYETLLFWVLVDPLQRHGFCSRANFSKEPAFSWMVKLSTEVKMSI 46
           VGM+E   + +S+S++YETLL WVLVDPLQRHGFCSRA+FSKEPAFSWM KLS EVKM+I
Sbjct: 148 VGMNEDTDVVDSASASYETLLCWVLVDPLQRHGFCSRADFSKEPAFSWMSKLSREVKMAI 207

Query: 45  KQSKILFYNGYGFDE 1
           ++SKILF NGYGFDE
Sbjct: 208 RKSKILFCNGYGFDE 222



 Score = 37.4 bits (85), Expect(2) = 1e-30
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -3

Query: 298 IGHVGDEIYGNFLSDVLCKEGI 233
           IGHVG+EIYG+FL DVL  EGI
Sbjct: 124 IGHVGNEIYGDFLLDVLHDEGI 145


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