BLASTX nr result

ID: Panax21_contig00017044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017044
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   220   1e-55
emb|CBI24406.3| unnamed protein product [Vitis vinifera]              213   1e-53
ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putat...   211   6e-53
ref|XP_003540267.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   186   2e-45
ref|XP_003543403.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   184   5e-45

>ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
           vinifera]
          Length = 882

 Score =  220 bits (560), Expect = 1e-55
 Identities = 114/165 (69%), Positives = 132/165 (80%), Gaps = 7/165 (4%)
 Frame = -3

Query: 476 GISGRDYALVPGEMWLHALKWHSNYKALMKDGRSFSASSEDDMGDVYPLQLRLSIPRESN 297
           G+SGRDYALVPG++WL ALKWH++ +   KDGR+FS   EDDM DVYPL LRLSI RE+N
Sbjct: 91  GVSGRDYALVPGDLWLQALKWHTDSRVATKDGRTFSVM-EDDMADVYPLLLRLSILRETN 149

Query: 296 SLGVKISKKDNAVECFKRACKIFSVESEHLRIWDFSGQTTQYFLNDKEKSPKDSQWQAEQ 117
           SLGVKI+KKDNAVE F+RACKIFSVESE L IWDFSGQTT +F+NDK K PKD Q Q++Q
Sbjct: 150 SLGVKITKKDNAVEFFRRACKIFSVESELLHIWDFSGQTTLFFINDKNKLPKDCQRQSDQ 209

Query: 116 DILLELQVYGLSD-LNKKDVKKDEITGQHPN------GASLMTNG 3
           +ILLELQVYGLSD L  ++ KKDE+  QH N      GASLM NG
Sbjct: 210 EILLELQVYGLSDSLRCREGKKDEMAAQHSNLAGSSCGASLMMNG 254


>emb|CBI24406.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  213 bits (543), Expect = 1e-53
 Identities = 107/151 (70%), Positives = 125/151 (82%), Gaps = 1/151 (0%)
 Frame = -3

Query: 476 GISGRDYALVPGEMWLHALKWHSNYKALMKDGRSFSASSEDDMGDVYPLQLRLSIPRESN 297
           G+SGRDYALVPG++WL ALKWH++ +   KDGR+FS   EDDM DVYPL LRLSI RE+N
Sbjct: 91  GVSGRDYALVPGDLWLQALKWHTDSRVATKDGRTFSVM-EDDMADVYPLLLRLSILRETN 149

Query: 296 SLGVKISKKDNAVECFKRACKIFSVESEHLRIWDFSGQTTQYFLNDKEKSPKDSQWQAEQ 117
           SLGVKI+KKDNAVE F+RACKIFSVESE L IWDFSGQTT +F+NDK K PKD Q Q++Q
Sbjct: 150 SLGVKITKKDNAVEFFRRACKIFSVESELLHIWDFSGQTTLFFINDKNKLPKDCQRQSDQ 209

Query: 116 DILLELQVYGLSD-LNKKDVKKDEITGQHPN 27
           +ILLELQVYGLSD L  ++ KKDE+  QH N
Sbjct: 210 EILLELQVYGLSDSLRCREGKKDEMAAQHSN 240


>ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223545031|gb|EEF46545.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 889

 Score =  211 bits (536), Expect = 6e-53
 Identities = 110/161 (68%), Positives = 128/161 (79%), Gaps = 6/161 (3%)
 Frame = -3

Query: 476 GISGRDYALVPGEMWLHALKWHSNYKALMKDGRSFSASSEDDMGDVYPLQLRLSIPRESN 297
           G+SGRDYALV GEMWL ALKWHS+ K   K  ++FSA+ EDDM DVYPLQLRLS+ RE N
Sbjct: 98  GVSGRDYALVSGEMWLKALKWHSDAKVASKSSKTFSAA-EDDMSDVYPLQLRLSVLREVN 156

Query: 296 SLGVKISKKDNAVECFKRACKIFSVESEHLRIWDFSGQTTQYFLNDKEKSPKDSQWQAEQ 117
           SLGVKISKK+NA E F+RACKIFSV+SE LRIWDFSGQTT +F+NDK KSPK+SQ Q +Q
Sbjct: 157 SLGVKISKKENATELFRRACKIFSVDSEMLRIWDFSGQTTLFFVNDKSKSPKESQRQLDQ 216

Query: 116 DILLELQVYGLSDLNK-KDVKKDE-----ITGQHPNGASLM 12
           +I+LELQVYGLSD  K +D KKD+       G H +G SLM
Sbjct: 217 EIVLELQVYGLSDNMKCRDGKKDDAVAQNCNGTHSSGTSLM 257


>ref|XP_003540267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine
           max]
          Length = 874

 Score =  186 bits (472), Expect = 2e-45
 Identities = 98/159 (61%), Positives = 122/159 (76%), Gaps = 1/159 (0%)
 Frame = -3

Query: 476 GISGRDYALVPGEMWLHALKWHSNYKALMKDGRSFSASSEDDMGDVYPLQLRLSIPRESN 297
           G+SGRD+ALV G+MWL ALKWHS+ K +MKD + FSA+ + DM DVYPLQLRLS+ RE+N
Sbjct: 94  GVSGRDFALVSGDMWLQALKWHSDSKNVMKDDKGFSAT-DSDMADVYPLQLRLSVQRETN 152

Query: 296 SLGVKISKKDNAVECFKRACKIFSVESEHLRIWDFSGQTTQYFLNDKEKSPKDSQWQAEQ 117
           S GV+ISKKDNAVE FKRACK+FSV+SE L IWD+S Q T + +ND  + P D Q Q++Q
Sbjct: 153 SFGVRISKKDNAVELFKRACKMFSVDSEMLCIWDYSDQIT-FLMNDNNQVPVDCQRQSDQ 211

Query: 116 DILLELQVYGLSD-LNKKDVKKDEITGQHPNGASLMTNG 3
           +ILLELQVYGLSD +  ++ KKDE+       ASL  NG
Sbjct: 212 EILLELQVYGLSDSIRCREGKKDEM-ANFSGSASLKMNG 249


>ref|XP_003543403.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine
           max]
          Length = 872

 Score =  184 bits (468), Expect = 5e-45
 Identities = 97/158 (61%), Positives = 122/158 (77%), Gaps = 1/158 (0%)
 Frame = -3

Query: 476 GISGRDYALVPGEMWLHALKWHSNYKALMKDGRSFSASSEDDMGDVYPLQLRLSIPRESN 297
           G+SGRD+ALV G+MWL ALKWHS+ K +MKD + FSA+ + DM DVYPLQLRLS+ RE+N
Sbjct: 93  GVSGRDFALVSGDMWLQALKWHSDSKNVMKDDKGFSAT-DSDMADVYPLQLRLSVQRETN 151

Query: 296 SLGVKISKKDNAVECFKRACKIFSVESEHLRIWDFSGQTTQYFLNDKEKSPKDSQWQAEQ 117
           S GV+ISKKDNAVE FKRACK+FSV+SE L +WD+S Q T + +NDK + P D Q Q++Q
Sbjct: 152 SFGVRISKKDNAVELFKRACKMFSVDSETLCMWDYSDQIT-FLMNDKNQVPVDCQRQSDQ 210

Query: 116 DILLELQVYGLSD-LNKKDVKKDEITGQHPNGASLMTN 6
           +ILLELQVYGLSD +  ++ KKDE+       ASL  N
Sbjct: 211 EILLELQVYGLSDSIRCREGKKDEM-ANFSGSASLKMN 247


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