BLASTX nr result

ID: Panax21_contig00017040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017040
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...   321   1e-85
emb|CBI23047.3| unnamed protein product [Vitis vinifera]              308   8e-82
ref|XP_002515833.1| nucleic acid binding protein, putative [Rici...   307   1e-81
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   304   1e-80
ref|XP_002317797.1| predicted protein [Populus trichocarpa] gi|2...   283   2e-74

>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score =  321 bits (822), Expect = 1e-85
 Identities = 155/199 (77%), Positives = 171/199 (85%), Gaps = 3/199 (1%)
 Frame = +2

Query: 98  MADAYWRYGDGRQA---ALPPLVGKRPRSDYDVPGGHELPGYYGRDDERGAHRVIRDSDS 268
           MADAYWRYGD RQ    +L  +VGKR RSDYDVP GHELP Y+ RDDERG  R +RD+DS
Sbjct: 1   MADAYWRYGDSRQPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGMRDTDS 60

Query: 269 IGASYDRYLRGAQLNPYGGGESARPISSGLSGRPVDDPRIMGIGGSDPAVSAKSRALGVG 448
           IGASYDRYLR AQ++ YGGG+SARPIS G+S R VDDPRI+G+G  +PA + K R LG G
Sbjct: 61  IGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMGSVEPATTVKDRTLGYG 120

Query: 449 GGRPELSLPPDASSTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRHSGGDPLVL 628
           GGRPE+ LPPDASSTLFVEGLPSNC+RREVAHIFRPFVGYKEVRLV+KESRH GGDPLVL
Sbjct: 121 GGRPEVPLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLVL 180

Query: 629 CFVDFLSPAHAATAMDALQ 685
           CFVDFLSPAHAATAMDALQ
Sbjct: 181 CFVDFLSPAHAATAMDALQ 199


>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  308 bits (788), Expect = 8e-82
 Identities = 147/197 (74%), Positives = 168/197 (85%), Gaps = 1/197 (0%)
 Frame = +2

Query: 98  MADAYWRYGDGRQAA-LPPLVGKRPRSDYDVPGGHELPGYYGRDDERGAHRVIRDSDSIG 274
           MAD YWRYG+ RQ   +P L  KRPRSDYDVPGGH+LP Y+ R+DER AHR IRDSDSIG
Sbjct: 1   MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 275 ASYDRYLRGAQLNPYGGGESARPISSGLSGRPVDDPRIMGIGGSDPAVSAKSRALGVGGG 454
           ASYDRYLR AQ+  YGG +S RP+S G++  PVDDPR++G+ G D   + KS++LG  GG
Sbjct: 61  ASYDRYLRNAQMPSYGG-DSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGG 119

Query: 455 RPELSLPPDASSTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRHSGGDPLVLCF 634
           RPEL LPPDASSTLFVEGLP+NC+RREV+HIFRPFVGYKEVRLV+KESRHSGGDPLVLCF
Sbjct: 120 RPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCF 179

Query: 635 VDFLSPAHAATAMDALQ 685
           VDF+SPAHAATAMDALQ
Sbjct: 180 VDFVSPAHAATAMDALQ 196


>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223545062|gb|EEF46575.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 232

 Score =  307 bits (786), Expect = 1e-81
 Identities = 153/199 (76%), Positives = 165/199 (82%), Gaps = 3/199 (1%)
 Frame = +2

Query: 98  MADAYWRYGDGRQAA---LPPLVGKRPRSDYDVPGGHELPGYYGRDDERGAHRVIRDSDS 268
           MADAYWRY D RQ     +P LVGKR RSDYDV  GHELP YY RDD+RGA R IRD+DS
Sbjct: 1   MADAYWRYSDARQPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAIRDTDS 60

Query: 269 IGASYDRYLRGAQLNPYGGGESARPISSGLSGRPVDDPRIMGIGGSDPAVSAKSRALGVG 448
           IGASYDRYLR A ++ Y GG+SARPIS G+  R  DDPRIMGIGG DP  + K R LG+G
Sbjct: 61  IGASYDRYLRSAPISSYSGGQSARPIS-GVPNRVADDPRIMGIGGLDPGPTVKDRTLGLG 119

Query: 449 GGRPELSLPPDASSTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRHSGGDPLVL 628
            GRPE SLPPDA+STLFVEGLPS+CSRREVAHIFRPFVGYKEVRLV+KESR  GGDPLVL
Sbjct: 120 SGRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRRPGGDPLVL 179

Query: 629 CFVDFLSPAHAATAMDALQ 685
           CFVDFLSPAHAATAMDALQ
Sbjct: 180 CFVDFLSPAHAATAMDALQ 198


>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  304 bits (778), Expect = 1e-80
 Identities = 146/197 (74%), Positives = 166/197 (84%), Gaps = 1/197 (0%)
 Frame = +2

Query: 98  MADAYWRYGDGRQAA-LPPLVGKRPRSDYDVPGGHELPGYYGRDDERGAHRVIRDSDSIG 274
           MAD YWRYG+ RQ   +P L  KRPRSDYDVPGGH+LP Y+ R+DER AHR IRDSDSIG
Sbjct: 1   MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 275 ASYDRYLRGAQLNPYGGGESARPISSGLSGRPVDDPRIMGIGGSDPAVSAKSRALGVGGG 454
           ASYDRYLR A   P  GG+S RP+S G++  PVDDPR++G+ G D   + KS++LG  GG
Sbjct: 61  ASYDRYLRNAM--PSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGG 118

Query: 455 RPELSLPPDASSTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRHSGGDPLVLCF 634
           RPEL LPPDASSTLFVEGLP+NC+RREV+HIFRPFVGYKEVRLV+KESRHSGGDPLVLCF
Sbjct: 119 RPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCF 178

Query: 635 VDFLSPAHAATAMDALQ 685
           VDF+SPAHAATAMDALQ
Sbjct: 179 VDFVSPAHAATAMDALQ 195


>ref|XP_002317797.1| predicted protein [Populus trichocarpa] gi|222858470|gb|EEE96017.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  283 bits (725), Expect = 2e-74
 Identities = 141/200 (70%), Positives = 162/200 (81%), Gaps = 4/200 (2%)
 Frame = +2

Query: 98  MADAYWRY-GDGRQA---ALPPLVGKRPRSDYDVPGGHELPGYYGRDDERGAHRVIRDSD 265
           MAD+YWRY GD RQ    ++  L GKRPR DYD+P G +L  YY RDD+RGA  VIRDSD
Sbjct: 1   MADSYWRYAGDSRQQPPQSMSSLTGKRPRIDYDIPSGRDLSSYYSRDDDRGALHVIRDSD 60

Query: 266 SIGASYDRYLRGAQLNPYGGGESARPISSGLSGRPVDDPRIMGIGGSDPAVSAKSRALGV 445
           SIGASYDRYLR   ++ YGGG+SAR +S G+   PVDD R++ +G  DP  S K R+L +
Sbjct: 61  SIGASYDRYLRSGTVSSYGGGQSARAMS-GVPSHPVDDTRMVSMGPMDPGASVKDRSLRM 119

Query: 446 GGGRPELSLPPDASSTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRHSGGDPLV 625
           G GR E+SLPPDASSTLFVEGLPS+C+RREV+HIFRPFVGYKEVRLV+KESRH GGDPLV
Sbjct: 120 GSGRSEVSLPPDASSTLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLV 179

Query: 626 LCFVDFLSPAHAATAMDALQ 685
           LCFVDFLSPAHAATAMDALQ
Sbjct: 180 LCFVDFLSPAHAATAMDALQ 199


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