BLASTX nr result
ID: Panax21_contig00017040
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00017040 (687 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel... 321 1e-85 emb|CBI23047.3| unnamed protein product [Vitis vinifera] 308 8e-82 ref|XP_002515833.1| nucleic acid binding protein, putative [Rici... 307 1e-81 ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265... 304 1e-80 ref|XP_002317797.1| predicted protein [Populus trichocarpa] gi|2... 283 2e-74 >gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra] Length = 233 Score = 321 bits (822), Expect = 1e-85 Identities = 155/199 (77%), Positives = 171/199 (85%), Gaps = 3/199 (1%) Frame = +2 Query: 98 MADAYWRYGDGRQA---ALPPLVGKRPRSDYDVPGGHELPGYYGRDDERGAHRVIRDSDS 268 MADAYWRYGD RQ +L +VGKR RSDYDVP GHELP Y+ RDDERG R +RD+DS Sbjct: 1 MADAYWRYGDSRQPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGMRDTDS 60 Query: 269 IGASYDRYLRGAQLNPYGGGESARPISSGLSGRPVDDPRIMGIGGSDPAVSAKSRALGVG 448 IGASYDRYLR AQ++ YGGG+SARPIS G+S R VDDPRI+G+G +PA + K R LG G Sbjct: 61 IGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMGSVEPATTVKDRTLGYG 120 Query: 449 GGRPELSLPPDASSTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRHSGGDPLVL 628 GGRPE+ LPPDASSTLFVEGLPSNC+RREVAHIFRPFVGYKEVRLV+KESRH GGDPLVL Sbjct: 121 GGRPEVPLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLVL 180 Query: 629 CFVDFLSPAHAATAMDALQ 685 CFVDFLSPAHAATAMDALQ Sbjct: 181 CFVDFLSPAHAATAMDALQ 199 >emb|CBI23047.3| unnamed protein product [Vitis vinifera] Length = 230 Score = 308 bits (788), Expect = 8e-82 Identities = 147/197 (74%), Positives = 168/197 (85%), Gaps = 1/197 (0%) Frame = +2 Query: 98 MADAYWRYGDGRQAA-LPPLVGKRPRSDYDVPGGHELPGYYGRDDERGAHRVIRDSDSIG 274 MAD YWRYG+ RQ +P L KRPRSDYDVPGGH+LP Y+ R+DER AHR IRDSDSIG Sbjct: 1 MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60 Query: 275 ASYDRYLRGAQLNPYGGGESARPISSGLSGRPVDDPRIMGIGGSDPAVSAKSRALGVGGG 454 ASYDRYLR AQ+ YGG +S RP+S G++ PVDDPR++G+ G D + KS++LG GG Sbjct: 61 ASYDRYLRNAQMPSYGG-DSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGG 119 Query: 455 RPELSLPPDASSTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRHSGGDPLVLCF 634 RPEL LPPDASSTLFVEGLP+NC+RREV+HIFRPFVGYKEVRLV+KESRHSGGDPLVLCF Sbjct: 120 RPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCF 179 Query: 635 VDFLSPAHAATAMDALQ 685 VDF+SPAHAATAMDALQ Sbjct: 180 VDFVSPAHAATAMDALQ 196 >ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis] gi|223545062|gb|EEF46575.1| nucleic acid binding protein, putative [Ricinus communis] Length = 232 Score = 307 bits (786), Expect = 1e-81 Identities = 153/199 (76%), Positives = 165/199 (82%), Gaps = 3/199 (1%) Frame = +2 Query: 98 MADAYWRYGDGRQAA---LPPLVGKRPRSDYDVPGGHELPGYYGRDDERGAHRVIRDSDS 268 MADAYWRY D RQ +P LVGKR RSDYDV GHELP YY RDD+RGA R IRD+DS Sbjct: 1 MADAYWRYSDARQPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAIRDTDS 60 Query: 269 IGASYDRYLRGAQLNPYGGGESARPISSGLSGRPVDDPRIMGIGGSDPAVSAKSRALGVG 448 IGASYDRYLR A ++ Y GG+SARPIS G+ R DDPRIMGIGG DP + K R LG+G Sbjct: 61 IGASYDRYLRSAPISSYSGGQSARPIS-GVPNRVADDPRIMGIGGLDPGPTVKDRTLGLG 119 Query: 449 GGRPELSLPPDASSTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRHSGGDPLVL 628 GRPE SLPPDA+STLFVEGLPS+CSRREVAHIFRPFVGYKEVRLV+KESR GGDPLVL Sbjct: 120 SGRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRRPGGDPLVL 179 Query: 629 CFVDFLSPAHAATAMDALQ 685 CFVDFLSPAHAATAMDALQ Sbjct: 180 CFVDFLSPAHAATAMDALQ 198 >ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera] Length = 229 Score = 304 bits (778), Expect = 1e-80 Identities = 146/197 (74%), Positives = 166/197 (84%), Gaps = 1/197 (0%) Frame = +2 Query: 98 MADAYWRYGDGRQAA-LPPLVGKRPRSDYDVPGGHELPGYYGRDDERGAHRVIRDSDSIG 274 MAD YWRYG+ RQ +P L KRPRSDYDVPGGH+LP Y+ R+DER AHR IRDSDSIG Sbjct: 1 MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60 Query: 275 ASYDRYLRGAQLNPYGGGESARPISSGLSGRPVDDPRIMGIGGSDPAVSAKSRALGVGGG 454 ASYDRYLR A P GG+S RP+S G++ PVDDPR++G+ G D + KS++LG GG Sbjct: 61 ASYDRYLRNAM--PSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGG 118 Query: 455 RPELSLPPDASSTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRHSGGDPLVLCF 634 RPEL LPPDASSTLFVEGLP+NC+RREV+HIFRPFVGYKEVRLV+KESRHSGGDPLVLCF Sbjct: 119 RPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCF 178 Query: 635 VDFLSPAHAATAMDALQ 685 VDF+SPAHAATAMDALQ Sbjct: 179 VDFVSPAHAATAMDALQ 195 >ref|XP_002317797.1| predicted protein [Populus trichocarpa] gi|222858470|gb|EEE96017.1| predicted protein [Populus trichocarpa] Length = 233 Score = 283 bits (725), Expect = 2e-74 Identities = 141/200 (70%), Positives = 162/200 (81%), Gaps = 4/200 (2%) Frame = +2 Query: 98 MADAYWRY-GDGRQA---ALPPLVGKRPRSDYDVPGGHELPGYYGRDDERGAHRVIRDSD 265 MAD+YWRY GD RQ ++ L GKRPR DYD+P G +L YY RDD+RGA VIRDSD Sbjct: 1 MADSYWRYAGDSRQQPPQSMSSLTGKRPRIDYDIPSGRDLSSYYSRDDDRGALHVIRDSD 60 Query: 266 SIGASYDRYLRGAQLNPYGGGESARPISSGLSGRPVDDPRIMGIGGSDPAVSAKSRALGV 445 SIGASYDRYLR ++ YGGG+SAR +S G+ PVDD R++ +G DP S K R+L + Sbjct: 61 SIGASYDRYLRSGTVSSYGGGQSARAMS-GVPSHPVDDTRMVSMGPMDPGASVKDRSLRM 119 Query: 446 GGGRPELSLPPDASSTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESRHSGGDPLV 625 G GR E+SLPPDASSTLFVEGLPS+C+RREV+HIFRPFVGYKEVRLV+KESRH GGDPLV Sbjct: 120 GSGRSEVSLPPDASSTLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLV 179 Query: 626 LCFVDFLSPAHAATAMDALQ 685 LCFVDFLSPAHAATAMDALQ Sbjct: 180 LCFVDFLSPAHAATAMDALQ 199