BLASTX nr result

ID: Panax21_contig00016992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016992
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vit...    70   4e-10
emb|CBI30623.3| unnamed protein product [Vitis vinifera]               70   4e-10
ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicu...    59   5e-07

>ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
          Length = 740

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 37/73 (50%), Positives = 47/73 (64%)
 Frame = -3

Query: 602 LFGFPLTEGSPGICKEGNPTRVTSPYVPKASLLPCGEEQLQSKPQLVSKILGGSCTKASD 423
           LFGF LTE      K  NPT VTS  +P  S LP   +QL S+P +++K +G +CTK SD
Sbjct: 671 LFGFSLTEERSIGNKVDNPTPVTSSLIPGTSFLP---QQLHSEPPVMTKAIGSNCTKVSD 727

Query: 422 IYSARDMLLDIAM 384
            Y+ RDML DIA+
Sbjct: 728 FYAVRDMLFDIAL 740


>emb|CBI30623.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 37/73 (50%), Positives = 47/73 (64%)
 Frame = -3

Query: 602 LFGFPLTEGSPGICKEGNPTRVTSPYVPKASLLPCGEEQLQSKPQLVSKILGGSCTKASD 423
           LFGF LTE      K  NPT VTS  +P  S LP   +QL S+P +++K +G +CTK SD
Sbjct: 632 LFGFSLTEERSIGNKVDNPTPVTSSLIPGTSFLP---QQLHSEPPVMTKAIGSNCTKVSD 688

Query: 422 IYSARDMLLDIAM 384
            Y+ RDML DIA+
Sbjct: 689 FYAVRDMLFDIAL 701


>ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum]
           gi|85069277|gb|ABC69710.1| auxin response factor 3
           [Solanum lycopersicum]
          Length = 747

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/73 (36%), Positives = 45/73 (61%)
 Frame = -3

Query: 602 LFGFPLTEGSPGICKEGNPTRVTSPYVPKASLLPCGEEQLQSKPQLVSKILGGSCTKASD 423
           +FGFPLTE      +   P+     +  + + LP  + +LQ  P L++ ++G + TK +D
Sbjct: 675 IFGFPLTESKISATRADTPSEAVYSHGLETTFLPSSDGKLQPGPPLMTNVVGTNFTKVND 734

Query: 422 IYSARDMLLDIAM 384
           +Y+ARD+LLDIA+
Sbjct: 735 LYAARDVLLDIAL 747


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