BLASTX nr result

ID: Panax21_contig00016977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016977
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323638.1| predicted protein [Populus trichocarpa] gi|2...   296   4e-78
ref|XP_002309168.1| predicted protein [Populus trichocarpa] gi|2...   293   2e-77
ref|XP_002526701.1| F-box protein, atfbl3, putative [Ricinus com...   291   8e-77
ref|XP_002265215.1| PREDICTED: F-box/LRR-repeat protein 3 [Vitis...   283   3e-74
ref|XP_004156627.1| PREDICTED: F-box/LRR-repeat protein 3-like [...   273   2e-71

>ref|XP_002323638.1| predicted protein [Populus trichocarpa] gi|222868268|gb|EEF05399.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score =  296 bits (757), Expect = 4e-78
 Identities = 146/186 (78%), Positives = 166/186 (89%)
 Frame = +1

Query: 223 LSSCENASHVGLSSLTDEVGSLRQLTLAYGSHVTLALAKSLQNLSMLQSIKLNGCQVTCS 402
           +SSC++ SHVGLSSL    GSL+QLTL+Y   VTLALA SL+ LSMLQS+KL+GC VT +
Sbjct: 263 ISSCQHISHVGLSSLISGAGSLQQLTLSYSCPVTLALANSLKRLSMLQSVKLDGCAVTSA 322

Query: 403 GLKAIGNWCISLRELSLSKCMGVTDEGLSSLVTTHKDLRKLDITCCRKITHISISQITNS 582
           GL AIGNWCI+L ELSLSKC+GVTDEGLSSLVT HKDL+KLDITCCRKIT +SI+ ITNS
Sbjct: 323 GLTAIGNWCITLSELSLSKCVGVTDEGLSSLVTKHKDLKKLDITCCRKITDVSIAYITNS 382

Query: 583 CTSLTSFRMESCTLVPRESFVLIGQRCHFLEDLDLTDNEVDDEGLKSISRCSKLSTLKLG 762
           CT+LTS RMESCTLVP E+FVLIGQRC FLE+LDLTDNE+DDEGLKSISRCSKLS+LKLG
Sbjct: 383 CTNLTSLRMESCTLVPSEAFVLIGQRCQFLEELDLTDNEIDDEGLKSISRCSKLSSLKLG 442

Query: 763 ICLNIT 780
           ICLNI+
Sbjct: 443 ICLNIS 448



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
 Frame = +1

Query: 223 LSSCENASHVGLSSLTDEVGSLRQLTLAYGSHV-TLALAKSLQNLSMLQSIKLNGCQVTC 399
           ++ C   + V ++ +T+   +L  L +   + V + A     Q    L+ + L   ++  
Sbjct: 365 ITCCRKITDVSIAYITNSCTNLTSLRMESCTLVPSEAFVLIGQRCQFLEELDLTDNEIDD 424

Query: 400 SGLKAIGNWCISLRELSLSKCMGVTDEGLSSLVTTHKDLRKLDITCCRKITHISISQITN 579
            GLK+I   C  L  L L  C+ ++DEGLS +      L +LD+     IT + I  I+ 
Sbjct: 425 EGLKSISR-CSKLSSLKLGICLNISDEGLSHVGMKCSKLTELDLYRSAGITDLGILAISR 483

Query: 580 SCTSLTSFRMESCTLVPRESFVLIGQRCHFLEDLDLTDNEVDDEGLKSISRCSKLSTLKL 759
            C  L    M  C                    +D+TD+      L S+S+CS+L+T + 
Sbjct: 484 GCPGLEMINMSYC--------------------IDITDS-----SLLSLSKCSRLNTFES 518

Query: 760 GICLNIT 780
             C  IT
Sbjct: 519 RGCPLIT 525


>ref|XP_002309168.1| predicted protein [Populus trichocarpa] gi|222855144|gb|EEE92691.1|
           predicted protein [Populus trichocarpa]
          Length = 666

 Score =  293 bits (751), Expect = 2e-77
 Identities = 143/186 (76%), Positives = 167/186 (89%)
 Frame = +1

Query: 223 LSSCENASHVGLSSLTDEVGSLRQLTLAYGSHVTLALAKSLQNLSMLQSIKLNGCQVTCS 402
           +SSC+N SHVGLSSLT     L+QLTL YGS VTLALA SL++LS+LQS+KL+GC VT +
Sbjct: 261 MSSCQNISHVGLSSLTSGAEGLQQLTLGYGSPVTLALANSLRSLSILQSVKLDGCPVTSA 320

Query: 403 GLKAIGNWCISLRELSLSKCMGVTDEGLSSLVTTHKDLRKLDITCCRKITHISISQITNS 582
           GLKAIGNWCISL ELSLSKC+GVTDEGLSSLVT HKDL+KLDITCCRKIT +SI+ IT+S
Sbjct: 321 GLKAIGNWCISLSELSLSKCLGVTDEGLSSLVTKHKDLKKLDITCCRKITDVSIAYITSS 380

Query: 583 CTSLTSFRMESCTLVPRESFVLIGQRCHFLEDLDLTDNEVDDEGLKSISRCSKLSTLKLG 762
           CT+LTS RMESCTLVP E+FV IGQ+C FLE+LDLTDNE+DD+GLKSIS+CSKLS+LK+G
Sbjct: 381 CTNLTSLRMESCTLVPSEAFVFIGQQCQFLEELDLTDNEIDDKGLKSISKCSKLSSLKIG 440

Query: 763 ICLNIT 780
           ICLNI+
Sbjct: 441 ICLNIS 446



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 13/187 (6%)
 Frame = +1

Query: 220 ILSSCENASHVGLSSLT-----------DEVGSLRQLTLAYGSHVTLALAKSLQNLSMLQ 366
           I SSC N + + + S T            +   L +L L         L KS+   S L 
Sbjct: 377 ITSSCTNLTSLRMESCTLVPSEAFVFIGQQCQFLEELDLTDNEIDDKGL-KSISKCSKLS 435

Query: 367 SIKLNGC-QVTCSGLKAIGNWCISLRELSLSKCMGVTDEGLSSLVTTHKDLRKLDITCCR 543
           S+K+  C  ++  GL  IG  C  L +L L +  G+TD G+ ++      L  ++++ C 
Sbjct: 436 SLKIGICLNISDKGLSHIGMKCSKLADLDLYRSAGITDLGILAICRGCSGLEMINMSYCM 495

Query: 544 KITHISISQITNSCTSLTSFRMESCTLVPRESFVLIGQRCHFLEDLDLTD-NEVDDEGLK 720
            IT  S+  ++  C+ L +F    C L+       I   C  L  LD+   + + D  + 
Sbjct: 496 DITDSSLLALSK-CSRLNTFESRGCPLITSSGLAAIAVGCKQLNKLDIKKCHNIGDAVML 554

Query: 721 SISRCSK 741
            ++R S+
Sbjct: 555 QLARFSQ 561



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 10/190 (5%)
 Frame = +1

Query: 223 LSSCENASHVGLSSLTDEVGSLRQLTLAYGSHVTLALAKSLQNLSMLQSIKLNGCQ-VTC 399
           LS   + S+ GL SL     +L  + L+  + +  A A ++     L+ + L  C+ +T 
Sbjct: 108 LSRSRSFSYNGLMSLALNCKNLVSIDLSNATELRDAAAAAVAEAKNLERLWLVRCKLITD 167

Query: 400 SGLKAIGNWCISLRELSLSKCMGVTDEGLSSLVTTHKDLRKLDITCCRKITHISISQITN 579
           +G+  I   C  LR +SL  C+GV+D G+  +    K++R LD         +S   ITN
Sbjct: 168 TGIGCIAVGCKKLRLISLKWCIGVSDLGVGLIAVKCKEIRSLD---------LSYLPITN 218

Query: 580 SCTS-------LTSFRMESCTLVPRESFVLIGQRCHFLEDLDLTD-NEVDDEGLKSI-SR 732
            C         L    +E C  +  +S   +   C  L+ LD++    +   GL S+ S 
Sbjct: 219 KCLPSILKLQYLEHIALEGCFGIDDDSLAALKHGCKSLKALDMSSCQNISHVGLSSLTSG 278

Query: 733 CSKLSTLKLG 762
              L  L LG
Sbjct: 279 AEGLQQLTLG 288


>ref|XP_002526701.1| F-box protein, atfbl3, putative [Ricinus communis]
           gi|223534001|gb|EEF35723.1| F-box protein, atfbl3,
           putative [Ricinus communis]
          Length = 669

 Score =  291 bits (746), Expect = 8e-77
 Identities = 142/186 (76%), Positives = 164/186 (88%)
 Frame = +1

Query: 223 LSSCENASHVGLSSLTDEVGSLRQLTLAYGSHVTLALAKSLQNLSMLQSIKLNGCQVTCS 402
           +SSC+N SHVGLSSL    G L QLTLAYGS VTLALA SL+ LS+LQS+KL+GC +T +
Sbjct: 264 MSSCQNISHVGLSSLIGGAGGLEQLTLAYGSPVTLALANSLKQLSVLQSVKLDGCMITSA 323

Query: 403 GLKAIGNWCISLRELSLSKCMGVTDEGLSSLVTTHKDLRKLDITCCRKITHISISQITNS 582
           GLKA+GNWCISL+ELSLSKC+GVTDEGLS LVT H+DLRKLDITCCRKIT +SIS IT+S
Sbjct: 324 GLKALGNWCISLKELSLSKCVGVTDEGLSCLVTKHRDLRKLDITCCRKITDVSISHITSS 383

Query: 583 CTSLTSFRMESCTLVPRESFVLIGQRCHFLEDLDLTDNEVDDEGLKSISRCSKLSTLKLG 762
           CT+LTS RMESCTLV RE+FVLIGQRC  LE+LDLTDNE+DDEGLKS+S C KL++LKLG
Sbjct: 384 CTNLTSLRMESCTLVSREAFVLIGQRCQLLEELDLTDNEIDDEGLKSVSSCLKLASLKLG 443

Query: 763 ICLNIT 780
           ICLNI+
Sbjct: 444 ICLNIS 449



 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
 Frame = +1

Query: 337 KSLQNLSMLQSIKLNGC-QVTCSGLKAIGNWCISLRELSLSKCMGVTDEGLSSLVTTHKD 513
           KS+ +   L S+KL  C  ++  GL  +G  C  L EL L +  GVTD G+ ++ ++  D
Sbjct: 429 KSVSSCLKLASLKLGICLNISDEGLAYVGKHCTRLTELDLYRSAGVTDTGILAIASSCLD 488

Query: 514 LRKLDITCCRKITHISISQITNSCTSLTSFRMESCTLVPRESFVLIGQRCHFLEDLDLTD 693
           L  ++++ CR IT  S+  + + C  L +F    C L+       I   C  +  LD+  
Sbjct: 489 LEMINMSYCRDITDSSLISL-SKCKKLNTFESRGCPLITSLGLAAIAVGCKQITKLDIKK 547

Query: 694 -NEVDDEGLKSISRCSK 741
            + +DD G+  ++  S+
Sbjct: 548 CHSIDDAGMLPLALFSQ 564


>ref|XP_002265215.1| PREDICTED: F-box/LRR-repeat protein 3 [Vitis vinifera]
           gi|297735597|emb|CBI18091.3| unnamed protein product
           [Vitis vinifera]
          Length = 663

 Score =  283 bits (724), Expect = 3e-74
 Identities = 142/186 (76%), Positives = 162/186 (87%)
 Frame = +1

Query: 223 LSSCENASHVGLSSLTDEVGSLRQLTLAYGSHVTLALAKSLQNLSMLQSIKLNGCQVTCS 402
           +SSC+N SHVGLSSLT +  SL+QL LAYGS VT ALA SLQ+LSMLQSIKL+GC VT +
Sbjct: 259 MSSCQNVSHVGLSSLTSDARSLQQLALAYGSPVTHALADSLQDLSMLQSIKLDGCAVTYA 318

Query: 403 GLKAIGNWCISLRELSLSKCMGVTDEGLSSLVTTHKDLRKLDITCCRKITHISISQITNS 582
           GLK IGN C  LRE+SLSKC+GVTDEGLSSLV  H+DLRKLD+TCCRKIT +SI+ ITNS
Sbjct: 319 GLKGIGNSCALLREVSLSKCLGVTDEGLSSLVMKHRDLRKLDVTCCRKITQVSIAYITNS 378

Query: 583 CTSLTSFRMESCTLVPRESFVLIGQRCHFLEDLDLTDNEVDDEGLKSISRCSKLSTLKLG 762
           C +LTS +MESCTLVP E+FVLIGQRC  LE+LDLTDNE+DDEGLKSISRC KL++LKLG
Sbjct: 379 CPALTSLKMESCTLVPSEAFVLIGQRCLCLEELDLTDNEIDDEGLKSISRCFKLTSLKLG 438

Query: 763 ICLNIT 780
           ICLNIT
Sbjct: 439 ICLNIT 444



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 3/195 (1%)
 Frame = +1

Query: 205 LKRPSILSSCENASHVGLSSLTDEVGSLRQLTLAYGSHVT-LALAKSLQNLSMLQSIKLN 381
           L R   LS C   +  GLSSL  +   LR+L +     +T +++A    +   L S+K+ 
Sbjct: 329 LLREVSLSKCLGVTDEGLSSLVMKHRDLRKLDVTCCRKITQVSIAYITNSCPALTSLKME 388

Query: 382 GCQ-VTCSGLKAIGNWCISLRELSLSKCMGVTDEGLSSLVTTHKDLRKLDITCCRKITHI 558
            C  V       IG  C+ L EL L+    + DEGL S+    K L  L +  C  IT  
Sbjct: 389 SCTLVPSEAFVLIGQRCLCLEELDLTD-NEIDDEGLKSISRCFK-LTSLKLGICLNITDE 446

Query: 559 SISQITNSCTSLTSFRMESCTLVPRESFVLIGQRCHFLEDLDLT-DNEVDDEGLKSISRC 735
            +  +   C+ L    +  C  +     + I   C  LE +++    ++ D  L S+S+C
Sbjct: 447 GLGHVGMCCSKLIELDLYRCVGITDSGILAIAHGCPGLEMINVAYCKDITDSSLISLSKC 506

Query: 736 SKLSTLKLGICLNIT 780
            +L+T +   C +IT
Sbjct: 507 PRLNTFESRGCPSIT 521



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
 Frame = +1

Query: 337 KSLQNLSMLQSIKLNGC-QVTCSGLKAIGNWCISLRELSLSKCMGVTDEGLSSLVTTHKD 513
           KS+     L S+KL  C  +T  GL  +G  C  L EL L +C+G+TD G+ ++      
Sbjct: 424 KSISRCFKLTSLKLGICLNITDEGLGHVGMCCSKLIELDLYRCVGITDSGILAIAHGCPG 483

Query: 514 LRKLDITCCRKITHISISQITNSCTSLTSFRMESCTLVPRESFVLIGQRCHFLEDLDLTD 693
           L  +++  C+ IT  S+  + + C  L +F    C  +       I   C  L  LD+  
Sbjct: 484 LEMINVAYCKDITDSSLISL-SKCPRLNTFESRGCPSITSLGLAAIAVGCKQLAKLDIKK 542

Query: 694 -NEVDDEGLKSISRCSK 741
            + ++D G+  ++  S+
Sbjct: 543 CHNINDAGMIPLAHFSQ 559


>ref|XP_004156627.1| PREDICTED: F-box/LRR-repeat protein 3-like [Cucumis sativus]
          Length = 667

 Score =  273 bits (699), Expect = 2e-71
 Identities = 135/185 (72%), Positives = 159/185 (85%)
 Frame = +1

Query: 223 LSSCENASHVGLSSLTDEVGSLRQLTLAYGSHVTLALAKSLQNLSMLQSIKLNGCQVTCS 402
           +SSC N S  GLSSLT    SL+QLTLAYGS VTLALA SL+NLSMLQS+KL+GC VT  
Sbjct: 259 VSSCPNISPTGLSSLTRATTSLQQLTLAYGSPVTLALANSLKNLSMLQSVKLDGCVVTYD 318

Query: 403 GLKAIGNWCISLRELSLSKCMGVTDEGLSSLVTTHKDLRKLDITCCRKITHISISQITNS 582
           GL+AIGN C+SL +LSLSKC+GVTDEGL S++  HKDL+KLDITCCRKIT +SIS +TNS
Sbjct: 319 GLEAIGNCCVSLSDLSLSKCVGVTDEGLISILKKHKDLKKLDITCCRKITDVSISNLTNS 378

Query: 583 CTSLTSFRMESCTLVPRESFVLIGQRCHFLEDLDLTDNEVDDEGLKSISRCSKLSTLKLG 762
           CTSLTS +MESC+LV RE F+LIG+ CH LE+LDLTDNE+D+EGL+S+SRCSKLS LKLG
Sbjct: 379 CTSLTSLKMESCSLVSREGFILIGRGCHLLEELDLTDNEIDNEGLRSLSRCSKLSILKLG 438

Query: 763 ICLNI 777
           ICLN+
Sbjct: 439 ICLNL 443



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 56/200 (28%), Positives = 82/200 (41%), Gaps = 27/200 (13%)
 Frame = +1

Query: 223 LSSCENASHVGLSSLTDEVGSLRQLTL--------------AYGSHVTLAL--------- 333
           ++ C   + V +S+LT+   SL  L +                G H+   L         
Sbjct: 361 ITCCRKITDVSISNLTNSCTSLTSLKMESCSLVSREGFILIGRGCHLLEELDLTDNEIDN 420

Query: 334 --AKSLQNLSMLQSIKLNGC-QVTCSGLKAIGNWCISLRELSLSKCMGVTDEGLSSLVTT 504
              +SL   S L  +KL  C  +   GL  IG  C  L EL L +C G+TD GL +++  
Sbjct: 421 EGLRSLSRCSKLSILKLGICLNLNDEGLGHIGTCCSKLLELDLYRCAGITDSGLLAIIHG 480

Query: 505 HKDLRKLDITCCRKITHISISQITNSCTSLTSFRMESCTLVPRESFVLIGQRCHFLEDLD 684
             DL  ++I  CR IT  S S +   C+ L +     C L+           C  L  LD
Sbjct: 481 CPDLEMINIAYCRDITDKSFSSL-RKCSRLKTIEARGCPLITSFGLAEAVAGCKLLRRLD 539

Query: 685 LTD-NEVDDEGLKSISRCSK 741
           L     VDD G+  ++  S+
Sbjct: 540 LKKCCNVDDAGMIPLAHFSQ 559


Top