BLASTX nr result

ID: Panax21_contig00016965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016965
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifer...    76   2e-12
ref|XP_003624561.1| Transportin-3 [Medicago truncatula] gi|35549...    72   5e-11
ref|XP_002512783.1| Transportin-3, putative [Ricinus communis] g...    72   6e-11
ref|XP_004161339.1| PREDICTED: transportin-3-like [Cucumis sativus]    70   2e-10
ref|XP_003548799.1| PREDICTED: transportin-3-like [Glycine max]        64   2e-08

>ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifera]
           gi|296082227|emb|CBI21232.3| unnamed protein product
           [Vitis vinifera]
          Length = 1015

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/48 (75%), Positives = 42/48 (87%)
 Frame = -1

Query: 359 GLPQLLLCRVGFLKQVLLLPALNNGDEKVIGGIACLMSEIG*AVSNSV 216
           GLPQ+LLCR+ FLK+VLLLPALNNGDEKVI G+ACLMSEIG A  + +
Sbjct: 272 GLPQVLLCRIQFLKEVLLLPALNNGDEKVISGLACLMSEIGQAAPSLI 319


>ref|XP_003624561.1| Transportin-3 [Medicago truncatula] gi|355499576|gb|AES80779.1|
           Transportin-3 [Medicago truncatula]
          Length = 1143

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/45 (75%), Positives = 40/45 (88%)
 Frame = -1

Query: 359 GLPQLLLCRVGFLKQVLLLPALNNGDEKVIGGIACLMSEIG*AVS 225
           G+PQ+LLCRV +LK+VLL PALN GD KVIGG+ACL+SEIG AVS
Sbjct: 283 GVPQILLCRVHYLKEVLLFPALNRGDMKVIGGLACLLSEIGQAVS 327


>ref|XP_002512783.1| Transportin-3, putative [Ricinus communis]
           gi|223547794|gb|EEF49286.1| Transportin-3, putative
           [Ricinus communis]
          Length = 1020

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/48 (72%), Positives = 41/48 (85%)
 Frame = -1

Query: 359 GLPQLLLCRVGFLKQVLLLPALNNGDEKVIGGIACLMSEIG*AVSNSV 216
           GLPQ+LLCRV FLK+VLLLPAL+N DEKVI G+ACLMSEIG A  + +
Sbjct: 273 GLPQVLLCRVHFLKEVLLLPALSNRDEKVINGLACLMSEIGQAAPSLI 320


>ref|XP_004161339.1| PREDICTED: transportin-3-like [Cucumis sativus]
          Length = 1029

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/48 (66%), Positives = 41/48 (85%)
 Frame = -1

Query: 359 GLPQLLLCRVGFLKQVLLLPALNNGDEKVIGGIACLMSEIG*AVSNSV 216
           GLPQ+LLCRV FLK++LLLP+L+ GDEKVIGG+ACL SE+G A  + +
Sbjct: 273 GLPQVLLCRVHFLKEMLLLPSLSTGDEKVIGGLACLFSEVGQAAPSLI 320


>ref|XP_003548799.1| PREDICTED: transportin-3-like [Glycine max]
          Length = 1011

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 39/48 (81%)
 Frame = -1

Query: 359 GLPQLLLCRVGFLKQVLLLPALNNGDEKVIGGIACLMSEIG*AVSNSV 216
           G+PQ+LLCRV +LK+VLL PA + GD KV+GG+ACL+SEIG A  + +
Sbjct: 269 GVPQILLCRVHYLKEVLLFPARSRGDIKVMGGLACLLSEIGQAAPSLI 316


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