BLASTX nr result

ID: Panax21_contig00016964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016964
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40139.1| unknown [Lotus japonicus]                               80   2e-13
ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
gb|AFK37342.1| unknown [Lotus japonicus]                               78   9e-13
ref|XP_003523061.1| PREDICTED: uncharacterized protein LOC100527...    77   2e-12
ref|XP_003608927.1| hypothetical protein MTR_4g106500 [Medicago ...    77   2e-12

>gb|AFK40139.1| unknown [Lotus japonicus]
          Length = 71

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/74 (55%), Positives = 46/74 (62%)
 Frame = +2

Query: 143 GSYGKSWADQWESNPDDXXXXXXXXXXXXXXXXXXXXXLGKTKAVASTGFKKMKEGTSVS 322
           GSYG +WADQW+  PD                      LGKTK VASTG KK+KEGTSVS
Sbjct: 2   GSYGTTWADQWDDGPDPVSGSNQHKKKSNGNKV-----LGKTKTVASTGVKKLKEGTSVS 56

Query: 323 LRWIKDKYNKTTQK 364
           L+WIK KY+KTTQK
Sbjct: 57  LQWIKTKYSKTTQK 70


>ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|222869144|gb|EEF06275.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/81 (51%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
 Frame = +2

Query: 131 MERNGSYGKSWADQWESNPDDXXXXXXXXXXXXXXXXXXXXX---LGKTKAVASTGFKKM 301
           M  N S+  SWADQW+ NPD                         LGKTK VASTG KK+
Sbjct: 1   MSGNSSHETSWADQWDYNPDPAVYDHSKDSSSDSTAKYKQKVGEGLGKTKQVASTGIKKV 60

Query: 302 KEGTSVSLRWIKDKYNKTTQK 364
           KEGTSV  RWIKDKY KTTQK
Sbjct: 61  KEGTSVGFRWIKDKYQKTTQK 81


>gb|AFK37342.1| unknown [Lotus japonicus]
          Length = 71

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 40/73 (54%), Positives = 45/73 (61%)
 Frame = +2

Query: 146 SYGKSWADQWESNPDDXXXXXXXXXXXXXXXXXXXXXLGKTKAVASTGFKKMKEGTSVSL 325
           SYG +WADQW+  PD                      LGKTK VASTG KK+KEGTSVSL
Sbjct: 3   SYGTTWADQWDDGPDPVSGSNQHKKKSNGNKV-----LGKTKTVASTGVKKLKEGTSVSL 57

Query: 326 RWIKDKYNKTTQK 364
           +WIK KY+KTTQK
Sbjct: 58  QWIKTKYSKTTQK 70


>ref|XP_003523061.1| PREDICTED: uncharacterized protein LOC100527101 [Glycine max]
          Length = 68

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/74 (54%), Positives = 45/74 (60%)
 Frame = +2

Query: 143 GSYGKSWADQWESNPDDXXXXXXXXXXXXXXXXXXXXXLGKTKAVASTGFKKMKEGTSVS 322
           GS G SWADQW++ PD                      LGKTKAVASTG KK+KEGTSV 
Sbjct: 2   GSNGTSWADQWDNGPDPVTVSNESKKKNNA--------LGKTKAVASTGVKKLKEGTSVG 53

Query: 323 LRWIKDKYNKTTQK 364
            +WIK KY+KTTQK
Sbjct: 54  FQWIKTKYHKTTQK 67


>ref|XP_003608927.1| hypothetical protein MTR_4g106500 [Medicago truncatula]
           gi|355509982|gb|AES91124.1| hypothetical protein
           MTR_4g106500 [Medicago truncatula]
          Length = 82

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/73 (50%), Positives = 42/73 (57%)
 Frame = +2

Query: 146 SYGKSWADQWESNPDDXXXXXXXXXXXXXXXXXXXXXLGKTKAVASTGFKKMKEGTSVSL 325
           SYG SWADQW++ PD                      LGKTK VASTG KK+K+GTSV L
Sbjct: 9   SYGTSWADQWDNGPDPIMADTNNNKSTTKYKEKFGEGLGKTKGVASTGVKKLKDGTSVGL 68

Query: 326 RWIKDKYNKTTQK 364
            WIK KY+K T K
Sbjct: 69  NWIKTKYSKATHK 81


Top