BLASTX nr result

ID: Panax21_contig00016948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016948
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534212.1| PREDICTED: auxin-responsive protein IAA27-li...    89   3e-16
gb|ACU24212.1| unknown [Glycine max]                                   89   3e-16
ref|XP_002284128.1| PREDICTED: auxin-responsive protein IAA27 is...    78   7e-13
ref|XP_002284118.1| PREDICTED: auxin-responsive protein IAA27 is...    78   7e-13
ref|XP_004171845.1| PREDICTED: auxin-responsive protein IAA27-li...    78   9e-13

>ref|XP_003534212.1| PREDICTED: auxin-responsive protein IAA27-like [Glycine max]
          Length = 307

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 57/90 (63%), Positives = 61/90 (67%), Gaps = 10/90 (11%)
 Frame = +2

Query: 188 MSMPLEEHG-------PLMEKSDNGRNNKNLNLKATELRLGLPGSESPERENGNSVEDKN 346
           MS+ LE+ G       P ME     R    LNLKATELRLGLPGSESPERE G  VEDKN
Sbjct: 1   MSVSLEQEGYVGLSEVPAMEGCSE-RTGGGLNLKATELRLGLPGSESPEREEG--VEDKN 57

Query: 347 LYPL---KGLVSAGAKRGFSDTIDASSGKW 427
           ++PL   K LVS GAKRGFSDTID  SGKW
Sbjct: 58  VHPLGMVKCLVS-GAKRGFSDTIDGGSGKW 86


>gb|ACU24212.1| unknown [Glycine max]
          Length = 152

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 57/90 (63%), Positives = 61/90 (67%), Gaps = 10/90 (11%)
 Frame = +2

Query: 188 MSMPLEEHG-------PLMEKSDNGRNNKNLNLKATELRLGLPGSESPERENGNSVEDKN 346
           MS+ LE+ G       P ME     R    LNLKATELRLGLPGSESPERE G  VEDKN
Sbjct: 1   MSVSLEQEGYVGLSEVPAMEGCSE-RTGGGLNLKATELRLGLPGSESPEREEG--VEDKN 57

Query: 347 LYPL---KGLVSAGAKRGFSDTIDASSGKW 427
           ++PL   K LVS GAKRGFSDTID  SGKW
Sbjct: 58  VHPLGMVKCLVS-GAKRGFSDTIDGGSGKW 86


>ref|XP_002284128.1| PREDICTED: auxin-responsive protein IAA27 isoform 2 [Vitis
           vinifera]
          Length = 305

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 47/76 (61%), Positives = 51/76 (67%), Gaps = 7/76 (9%)
 Frame = +2

Query: 221 MEKSD----NGRNNKNLNLKATELRLGLPGSESPERENGNSVEDKNLYP---LKGLVSAG 379
           ME S+    +   +  LNLKATELRLGLPGSESPER +     DKN YP   LK LVS G
Sbjct: 18  MESSEKLTTDSEGSNGLNLKATELRLGLPGSESPERIDSVGGLDKNGYPLGVLKNLVS-G 76

Query: 380 AKRGFSDTIDASSGKW 427
           AKRGFSD ID  SGKW
Sbjct: 77  AKRGFSDAIDGGSGKW 92


>ref|XP_002284118.1| PREDICTED: auxin-responsive protein IAA27 isoform 1 [Vitis
           vinifera]
          Length = 320

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 47/76 (61%), Positives = 51/76 (67%), Gaps = 7/76 (9%)
 Frame = +2

Query: 221 MEKSD----NGRNNKNLNLKATELRLGLPGSESPERENGNSVEDKNLYP---LKGLVSAG 379
           ME S+    +   +  LNLKATELRLGLPGSESPER +     DKN YP   LK LVS G
Sbjct: 18  MESSEKLTTDSEGSNGLNLKATELRLGLPGSESPERIDSVGGLDKNGYPLGVLKNLVS-G 76

Query: 380 AKRGFSDTIDASSGKW 427
           AKRGFSD ID  SGKW
Sbjct: 77  AKRGFSDAIDGGSGKW 92


>ref|XP_004171845.1| PREDICTED: auxin-responsive protein IAA27-like [Cucumis sativus]
          Length = 274

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 51/90 (56%), Positives = 59/90 (65%), Gaps = 10/90 (11%)
 Frame = +2

Query: 188 MSMPLE-------EHGPLME---KSDNGRNNKNLNLKATELRLGLPGSESPERENGNSVE 337
           MS+PLE       E  P +E   KS + RN+  LNLKATELRLGLPGSESP R++G   E
Sbjct: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDG--FE 58

Query: 338 DKNLYPLKGLVSAGAKRGFSDTIDASSGKW 427
           DKN +  K  VS GAKRGFS  ID +S KW
Sbjct: 59  DKNGFLHKSSVS-GAKRGFSIAIDRASAKW 87


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