BLASTX nr result

ID: Panax21_contig00016946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016946
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   307   2e-81
ref|XP_002322229.1| global transcription factor group [Populus t...   306   4e-81
ref|XP_002511228.1| bromodomain-containing protein, putative [Ri...   303   3e-80
ref|XP_002318704.1| global transcription factor group [Populus t...   300   2e-79
ref|XP_002270843.2| PREDICTED: transcription factor GTE8-like [V...   285   1e-74

>ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE10-like
           [Vitis vinifera]
          Length = 770

 Score =  307 bits (787), Expect = 2e-81
 Identities = 159/279 (56%), Positives = 191/279 (68%), Gaps = 2/279 (0%)
 Frame = +2

Query: 2   LELRLKNELEQIRILQKKFXXXXXXXXXXXXXXDIHSCSDGQRMSVAETFPRSVGGSASQ 181
           LE RLK EL+Q+R  QKK               DI SCS+GQ+    +   +S   S  Q
Sbjct: 113 LERRLKMELQQVRAFQKKIASLCSNLVPLSPTSDIRSCSNGQKRPPKDKIQKSSEASTHQ 172

Query: 182 GKKRAPP-GRNGSRSKRPTEVGLFDSAKQGVLPSASHAMLMKQCETLLNRLMMHQHGWAF 358
            KKR PP GRN  + KR    G F+S KQ   P  S++MLMKQCETLL+RLM HQ GW F
Sbjct: 173 RKKRPPPPGRNVPKMKRGLS-GRFESVKQAAPPGTSNSMLMKQCETLLSRLMTHQFGWIF 231

Query: 359 NTPVDVVKLNIPDYHTVIKHPMDLGTVKSKLTSGEYSSTLEFAADVRLTFSNALTYNPPG 538
           N PVDVV+L IPDY TVIKHPMDLGT+KSK+ SGEY S  +FAADVRLTFSNA+TYNP G
Sbjct: 232 NNPVDVVELKIPDYFTVIKHPMDLGTIKSKMASGEYLSPFDFAADVRLTFSNAMTYNPRG 291

Query: 539 NDFHIMAQVVSKYFEMRWKPIEKKLPVATDA-PVPSKSSVHIGSEIANPMPPSKKKKIAS 715
           ND H MA+ ++K+FEMRWKPIEKKLPV  D   +PS+S  H+  E A+ MPPSKKKK+A 
Sbjct: 292 NDVHFMAETLNKFFEMRWKPIEKKLPVTIDVESLPSRSDAHLEIETADRMPPSKKKKVAP 351

Query: 716 VENKVRQESVKPVMTDVERHKLSMELEALLTELPESIID 832
            ++K++ E  K +MT  ERH L  ELE LL ELP+ I+D
Sbjct: 352 TDHKIKMEPNKRIMTKEERHNLGTELETLLGELPDDIVD 390


>ref|XP_002322229.1| global transcription factor group [Populus trichocarpa]
           gi|222869225|gb|EEF06356.1| global transcription factor
           group [Populus trichocarpa]
          Length = 709

 Score =  306 bits (784), Expect = 4e-81
 Identities = 168/290 (57%), Positives = 194/290 (66%), Gaps = 13/290 (4%)
 Frame = +2

Query: 2   LELRLKNELEQIRILQKKFXXXXXXXXXXXXXXDIHSCSDGQRMSVAETFPRSVGGSASQ 181
           LE+RLK ELEQ+RILQ+K               DI SCSDGQ+    E    S   SA Q
Sbjct: 68  LEMRLKKELEQVRILQRKVASLSSNTVLLSPSSDIRSCSDGQKRPPLEGLHSSFEVSAPQ 127

Query: 182 GKKRAPPGRNGSRSKRPTEVGLFDSAKQGVLPSA----SHAMLMKQCETLLNRLMMHQHG 349
            KKRAPP RN   +K+ T      +  + V P+A    S AMLMKQCE LLNRLM HQ G
Sbjct: 128 SKKRAPPDRNRGHTKKGTS-----ARSEPVKPAAPLGISTAMLMKQCEALLNRLMAHQFG 182

Query: 350 WAFNTPVDVVKLNIPDYHTVIKHPMDLGTVKSKLTSGEYSSTLEFAADVRLTFSNALTYN 529
           W F TPVDVVKLNIPDY T+IKHPMDLGTVKSK+ SGEYSS L FAADVRLTFSNA+ YN
Sbjct: 183 WIFKTPVDVVKLNIPDYFTIIKHPMDLGTVKSKIVSGEYSSPLGFAADVRLTFSNAMKYN 242

Query: 530 PPGNDFHIMAQVVSKYFEMRWKPIEKKLPVAT---------DAPVPSKSSVHIGSEIANP 682
           PPGND H MA+ + KYFE+RWK IEKKLPV T         D  +  +++VHI  E    
Sbjct: 243 PPGNDVHSMAETLRKYFEVRWKVIEKKLPVTTGVESMPSRIDVHIERETTVHIERETTTS 302

Query: 683 MPPSKKKKIASVENKVRQESVKPVMTDVERHKLSMELEALLTELPESIID 832
            PP KKKKI   +NKV+ E V+ VM++ E+ KLSMELEALL ELPESII+
Sbjct: 303 APPLKKKKITPSDNKVKPEPVRRVMSNAEKQKLSMELEALLGELPESIIE 352


>ref|XP_002511228.1| bromodomain-containing protein, putative [Ricinus communis]
           gi|223550343|gb|EEF51830.1| bromodomain-containing
           protein, putative [Ricinus communis]
          Length = 759

 Score =  303 bits (776), Expect = 3e-80
 Identities = 159/278 (57%), Positives = 194/278 (69%), Gaps = 1/278 (0%)
 Frame = +2

Query: 2   LELRLKNELEQIRILQKKFXXXXXXXXXXXXXXDIHSCSDGQRMSVAETFPRSVGGSASQ 181
           L+LR K ELEQ+R L KK               DI SCSDG +    ET  +S   SA Q
Sbjct: 110 LKLRFKRELEQVRFLYKKVASLGSNAAALSPSSDIRSCSDGLKRPPLETLHKSYAVSAPQ 169

Query: 182 GKKRAPPGRNGSRSKRPTEVGLFDSAKQGVLPSASHAMLMKQCETLLNRLMMHQHGWAFN 361
            KKR PPGRNG+R+K+ +     +  K       S+AMLMKQCETLL+RLM+HQ+ W FN
Sbjct: 170 SKKRGPPGRNGARTKKSSHKRS-EPEKLAAPVITSNAMLMKQCETLLSRLMLHQYAWVFN 228

Query: 362 TPVDVVKLNIPDYHTVIKHPMDLGTVKSKLTSGEYSSTLEFAADVRLTFSNALTYNPPGN 541
            PVDV KLNIPDY TVIKHPMDLGTVKSK+T+G YSS L FAADVRLTFSNA+ YNPPGN
Sbjct: 229 NPVDVEKLNIPDYFTVIKHPMDLGTVKSKITTGAYSSPLAFAADVRLTFSNAMKYNPPGN 288

Query: 542 DFHIMAQVVSKYFEMRWKPIEKKLPVATDA-PVPSKSSVHIGSEIANPMPPSKKKKIASV 718
           D H MA+ +SKYFE+RWK IEKKLPV   A PV  ++ +H+ +E      P+KKKKIA +
Sbjct: 289 DVHFMAETLSKYFEVRWKAIEKKLPVTIGAEPVAPRAGIHVETETKIDPTPAKKKKIAQI 348

Query: 719 ENKVRQESVKPVMTDVERHKLSMELEALLTELPESIID 832
           ++ V+ E  + VM++ E+ KLS ELEALL+ELPE+IID
Sbjct: 349 DSMVKLEPFRQVMSNEEKLKLSTELEALLSELPETIID 386


>ref|XP_002318704.1| global transcription factor group [Populus trichocarpa]
           gi|222859377|gb|EEE96924.1| global transcription factor
           group [Populus trichocarpa]
          Length = 613

 Score =  300 bits (769), Expect = 2e-79
 Identities = 163/286 (56%), Positives = 194/286 (67%), Gaps = 9/286 (3%)
 Frame = +2

Query: 2   LELRLKNELEQIRILQKKFXXXXXXXXXXXXXXDIHSCSDGQRMSVAETFPRSVGGSASQ 181
           LE+RLKN+LEQ+RIL +K                +H               RS   SA +
Sbjct: 23  LEIRLKNDLEQVRILHRK-----------VASLSVH---------------RSFEVSAPK 56

Query: 182 GKKRAPPGRNGSRSKRPTEVGLFDSAKQGVLPSASHAMLMKQCETLLNRLMMHQHGWAFN 361
            KKRAPPGRNG+RSK+ T  G F+  K       ++AMLMKQCETLLNRLM HQ GW FN
Sbjct: 57  SKKRAPPGRNGARSKKGTS-GRFEPVKSAAPLGITNAMLMKQCETLLNRLMTHQFGWIFN 115

Query: 362 TPVDVVKLNIPDYHTVIKHPMDLGTVKSKLTSGEYSSTLEFAADVRLTFSNALTYNPPGN 541
           TPVDVVK+NIPDY T+IKHPMDLGTVKS++ SGEYSS L FAADVRLTF+NA+ YNPPGN
Sbjct: 116 TPVDVVKMNIPDYFTIIKHPMDLGTVKSRIISGEYSSPLGFAADVRLTFANAMKYNPPGN 175

Query: 542 DFHIMAQVVSKYFEMRWKPIEKKLPVATDA-PVPSKSSV--------HIGSEIANPMPPS 694
           DFH MA+ +SK+FE+RWK IEKK+PV  D  PVPS++ V        HI  E     PP 
Sbjct: 176 DFHFMAETLSKFFEVRWKVIEKKIPVTADVEPVPSRADVRMEMETTAHIEKETTTDTPPL 235

Query: 695 KKKKIASVENKVRQESVKPVMTDVERHKLSMELEALLTELPESIID 832
           KKKKI   +NKV+   ++ VMT+ ER KLSMELEALL ELPE+II+
Sbjct: 236 KKKKITPSDNKVKPGPIRKVMTNEERQKLSMELEALLAELPENIIE 281


>ref|XP_002270843.2| PREDICTED: transcription factor GTE8-like [Vitis vinifera]
          Length = 739

 Score =  285 bits (728), Expect = 1e-74
 Identities = 152/277 (54%), Positives = 182/277 (65%)
 Frame = +2

Query: 2   LELRLKNELEQIRILQKKFXXXXXXXXXXXXXXDIHSCSDGQRMSVAETFPRSVGGSASQ 181
           L LRL+ ELEQIR+LQKK               DI SCS+GQR  V +   +S   ++  
Sbjct: 78  LVLRLRMELEQIRLLQKKVDLQRTNGVALSSSSDILSCSNGQRGHV-DNGRKSSALTSGP 136

Query: 182 GKKRAPPGRNGSRSKRPTEVGLFDSAKQGVLPSASHAMLMKQCETLLNRLMMHQHGWAFN 361
           GKK  P G       R T  G F+SA Q   PS +  +LMKQCETLL +LM HQHGW FN
Sbjct: 137 GKKLEPLGNKNRAWNRGTS-GRFESATQASAPSTASVLLMKQCETLLKQLMSHQHGWVFN 195

Query: 362 TPVDVVKLNIPDYHTVIKHPMDLGTVKSKLTSGEYSSTLEFAADVRLTFSNALTYNPPGN 541
            PVD+VKLNIPDY T+IKHPMDLGT+K K+ SG YSS L+FAADVRLTFSNA T+NPPGN
Sbjct: 196 EPVDIVKLNIPDYFTIIKHPMDLGTIKGKIASGAYSSPLDFAADVRLTFSNAQTFNPPGN 255

Query: 542 DFHIMAQVVSKYFEMRWKPIEKKLPVATDAPVPSKSSVHIGSEIANPMPPSKKKKIASVE 721
           D H MA  +SK+FE+RWK IEKKLPV     +P K   H   + A PMPPSKK+K+ S  
Sbjct: 256 DVHKMADTLSKFFEVRWKTIEKKLPVTKTQSLPGKYGTHGEMKTAKPMPPSKKRKVTSTH 315

Query: 722 NKVRQESVKPVMTDVERHKLSMELEALLTELPESIID 832
           ++V QE V+ VMT  E+  L  +LE LL E+P  IID
Sbjct: 316 HEVIQEPVQKVMTADEKRNLGRDLEDLLGEIPVQIID 352


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