BLASTX nr result

ID: Panax21_contig00016930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016930
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32919.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_002317202.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 58/159 (36%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
 Frame = +3

Query: 54  FFCN-------CPKLEDLFIEGYVLDSERVNVNISAPVLKTLVIEWCCWYRYRDCYIVVN 212
           FFC        CP LE+L IE + LD + V  N+SAP LK+L I +    +Y+   +VV+
Sbjct: 139 FFCKTLVVLKLCPVLEELVIERWRLDEQWV-FNVSAPTLKSLAIYFS---KYK---LVVD 191

Query: 213 TPILEHLSI*DNFLAHYDLCILPLLIKADFNVGDCYIEAVGGTKELADRARVLAEKFSQV 392
            P LE+LSI D     Y +  L  L+KA  NVG   I  +        R   L    S V
Sbjct: 192 APNLEYLSITDFVSEDYLMSNLSSLVKAYVNVGPT-IRGIDDQILYRGRIYELLRGISNV 250

Query: 393 KFLSLGASSMKALH-YADDFEWPLFPNLTHLELVVHNCY 506
           K LSL   ++ +L      +E P F ++T LEL V   Y
Sbjct: 251 KHLSLSGETLHSLSGMFCGYELPAFHSVTRLELEVDYGY 289


>ref|XP_002317202.1| predicted protein [Populus trichocarpa] gi|222860267|gb|EEE97814.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   KTLNVSLAL-PNNTLTQTFFCNCPKLEDLFIEGYVLDSERVNVNISAPVLKTLVIEWCCW 179
           K L +S  L P       FF +CPKL+ L ++       +  + IS P+L++LVI  C  
Sbjct: 238 KELELSFCLLPYGQSMVQFFGDCPKLQKLTLKECQWGLAKC-LYISTPMLESLVI--CEA 294

Query: 180 YRYRDCYIVVNTPILEHLSI*DNFLAHYDLCILPLLIKADFNVGDCYIEAVGGTKELADR 359
                C +V++   ++  S   +    Y LC   ++           IE  G  KE+A R
Sbjct: 295 TSSSGCKVVISGANIKSFSYHGDLTTTYCLCSSSIVDACIHVSSKGMIEREGREKEVAHR 354

Query: 360 ARVLAEKFSQVKFLSLGASSMKALHYADDFEWPLFPNLTHLEL 488
              L  +   VK L L   +++AL YA++ + P+F  LT LEL
Sbjct: 355 LHKLIMECCNVKHLELSPDTLEALAYAEELDLPVFQRLTRLEL 397


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