BLASTX nr result

ID: Panax21_contig00016927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016927
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514152.1| Grave disease carrier protein, putative [Ric...    95   2e-17
ref|XP_002309234.1| predicted protein [Populus trichocarpa] gi|2...    95   2e-17
ref|XP_004135701.1| PREDICTED: graves disease carrier protein ho...    91   3e-16
ref|XP_002279837.2| PREDICTED: graves disease carrier protein-li...    91   3e-16
emb|CBI27936.3| unnamed protein product [Vitis vinifera]               91   3e-16

>ref|XP_002514152.1| Grave disease carrier protein, putative [Ricinus communis]
           gi|223546608|gb|EEF48106.1| Grave disease carrier
           protein, putative [Ricinus communis]
          Length = 338

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 48/65 (73%), Positives = 52/65 (80%), Gaps = 7/65 (10%)
 Frame = +1

Query: 673 FRGNGASVARIVPYATLH*-------HWIVYSFPGIGSGPVLDLVAGSFSGGTAVLFTYP 831
           +RGNGASVARIVPYA LH         WI+ S+P IG GPVLDLVAGSF+GGTAVLFTYP
Sbjct: 81  YRGNGASVARIVPYAALHYMTYEQYRRWIILSYPDIGRGPVLDLVAGSFAGGTAVLFTYP 140

Query: 832 LDLVR 846
           LDLVR
Sbjct: 141 LDLVR 145


>ref|XP_002309234.1| predicted protein [Populus trichocarpa] gi|222855210|gb|EEE92757.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 48/66 (72%), Positives = 52/66 (78%), Gaps = 7/66 (10%)
 Frame = +1

Query: 670 IFRGNGASVARIVPYATLH*-------HWIVYSFPGIGSGPVLDLVAGSFSGGTAVLFTY 828
           ++RGNGASVARIVPYA LH         WI+ SFP IG GPVLDLVAGSF+GGTAVL TY
Sbjct: 71  LYRGNGASVARIVPYAALHYMTYEQYRRWIILSFPDIGRGPVLDLVAGSFAGGTAVLLTY 130

Query: 829 PLDLVR 846
           PLDLVR
Sbjct: 131 PLDLVR 136


>ref|XP_004135701.1| PREDICTED: graves disease carrier protein homolog [Cucumis sativus]
          Length = 341

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 45/65 (69%), Positives = 50/65 (76%), Gaps = 7/65 (10%)
 Frame = +1

Query: 673 FRGNGASVARIVPYATLH*-------HWIVYSFPGIGSGPVLDLVAGSFSGGTAVLFTYP 831
           +RGNGASVARIVPYA LH         WI+ SFP    GPVLDL+AGSF+GGTAV+FTYP
Sbjct: 81  YRGNGASVARIVPYAALHYMAYEQYRRWIILSFPNFNRGPVLDLLAGSFAGGTAVIFTYP 140

Query: 832 LDLVR 846
           LDLVR
Sbjct: 141 LDLVR 145


>ref|XP_002279837.2| PREDICTED: graves disease carrier protein-like [Vitis vinifera]
          Length = 341

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 46/65 (70%), Positives = 51/65 (78%), Gaps = 7/65 (10%)
 Frame = +1

Query: 673 FRGNGASVARIVPYATLH*-------HWIVYSFPGIGSGPVLDLVAGSFSGGTAVLFTYP 831
           +RGNGASVARIVPYA LH         WI+ +FP I  GPVLDL+AGSF+GGTAVLFTYP
Sbjct: 81  YRGNGASVARIVPYAALHYMAYEQYRRWIILNFPDIRRGPVLDLMAGSFAGGTAVLFTYP 140

Query: 832 LDLVR 846
           LDLVR
Sbjct: 141 LDLVR 145


>emb|CBI27936.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 46/65 (70%), Positives = 51/65 (78%), Gaps = 7/65 (10%)
 Frame = +1

Query: 673 FRGNGASVARIVPYATLH*-------HWIVYSFPGIGSGPVLDLVAGSFSGGTAVLFTYP 831
           +RGNGASVARIVPYA LH         WI+ +FP I  GPVLDL+AGSF+GGTAVLFTYP
Sbjct: 41  YRGNGASVARIVPYAALHYMAYEQYRRWIILNFPDIRRGPVLDLMAGSFAGGTAVLFTYP 100

Query: 832 LDLVR 846
           LDLVR
Sbjct: 101 LDLVR 105


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