BLASTX nr result

ID: Panax21_contig00016924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016924
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vit...   136   4e-30
ref|XP_002311616.1| predicted protein [Populus trichocarpa] gi|2...   123   4e-26
ref|XP_002516769.1| ATP binding protein, putative [Ricinus commu...   112   6e-23
ref|XP_003592415.1| Protein TIME FOR COFFEE [Medicago truncatula...   101   2e-19
ref|XP_004170713.1| PREDICTED: protein TIME FOR COFFEE-like, par...    99   7e-19

>ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vitis vinifera]
          Length = 1587

 Score =  136 bits (343), Expect = 4e-30
 Identities = 97/239 (40%), Positives = 118/239 (49%), Gaps = 1/239 (0%)
 Frame = +3

Query: 3    SNADEESKVLVGKAQNTGGQSIAFSRPDFTDASGSTLSRNSVVDSSARTLNLSSGPTRPS 182
            S+ +EE K L GKA  T GQSIAFSRPD  D S ST+  N V+DSS RTLNLSS P R S
Sbjct: 1117 SSVEEERKALAGKAAATAGQSIAFSRPDLQDTSVSTIPGNGVIDSSTRTLNLSSAPARAS 1176

Query: 183  HSPMPNVMGTTGAPSNEPSLRDQLKWHAHQQKIKMQELNEQRRQKNSSVPNVPNVMATTG 362
             S  P     T AP+++   + Q +    QQ I++Q+ ++                AT  
Sbjct: 1177 ASVSPATASATNAPNSQQRQQQQQQQQQQQQMIQLQKQHQ---------------FATVA 1221

Query: 363  APSNEPSLRDQLKWHVHKQKIEMQELNEQRRQKNLYAAVAASRSCLPATSNGSAYSEHLT 542
            A                                      AA+RS  PATSNGS YS+HL 
Sbjct: 1222 A--------------------------------------AAARSKTPATSNGSVYSDHLP 1243

Query: 543  STSSIAAKFPNAPSSGFPQNFVXXXXXXXXXXXXXXWKNSTRTPTSQVQS-PLASSTSS 716
            S+SS+AAKFPNA  S FP NFV              WKNS RT TSQV +  L+SST+S
Sbjct: 1244 SSSSMAAKFPNA-LSAFPPNFV---QGSSSPGQSPQWKNSVRTSTSQVPTLALSSSTAS 1298


>ref|XP_002311616.1| predicted protein [Populus trichocarpa] gi|222851436|gb|EEE88983.1|
            predicted protein [Populus trichocarpa]
          Length = 1518

 Score =  123 bits (308), Expect = 4e-26
 Identities = 91/244 (37%), Positives = 119/244 (48%), Gaps = 6/244 (2%)
 Frame = +3

Query: 3    SNADEESKVLVG-KAQNTGGQSIAFSRPDFTDASGSTLSRNSVVDSSARTLNLSSGPTRP 179
            SN +EE K + G K   + GQSI FSRPD TD+  ST+  N+VVDSSAR LNL S P R 
Sbjct: 1060 SNVEEERKAMAGGKTPLSAGQSIVFSRPDLTDSPVSTMPVNNVVDSSARNLNLGSAPART 1119

Query: 180  SHSPMPNVMGTTGAPSNEPSLRDQLKWHAHQQKIKMQELNEQRRQKNSSVPNVPNVMATT 359
            S S                                                     M+ T
Sbjct: 1120 SGS----------------------------------------------------FMSAT 1127

Query: 360  GAPSNEPSLRDQLKWHVHKQKIEMQELNEQ-----RRQKNLYAAVAASRSCLPATSNGSA 524
                N PS++ Q++ + H+Q  + Q+ N+Q     ++Q+   AA A++RS  PATSNGS 
Sbjct: 1128 IGTGNAPSMQQQMQRNHHQQ--QQQQWNQQIFQFQKQQQFAAAAAASTRSKTPATSNGSV 1185

Query: 525  YSEHLTSTSSIAAKFPNAPSSGFPQNFVXXXXXXXXXXXXXXWKNSTRTPTSQVQSPLAS 704
            YS+H++S+SS A KFPNA  S FPQN V              WK+S RT TSQV S   +
Sbjct: 1186 YSDHISSSSSAATKFPNA-LSAFPQNLV---QSSSSPAQSPQWKSSARTTTSQVPSSSLT 1241

Query: 705  STSS 716
            S+SS
Sbjct: 1242 SSSS 1245


>ref|XP_002516769.1| ATP binding protein, putative [Ricinus communis]
            gi|223543857|gb|EEF45383.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1613

 Score =  112 bits (281), Expect = 6e-23
 Identities = 85/238 (35%), Positives = 115/238 (48%), Gaps = 1/238 (0%)
 Frame = +3

Query: 6    NADEESKVLVG-KAQNTGGQSIAFSRPDFTDASGSTLSRNSVVDSSARTLNLSSGPTRPS 182
            +A+++ K + G K   T GQSIAFSRPD T+ S  T+  N+V+DSS R LNL S P R S
Sbjct: 1155 HAEDDRKTMSGVKVHATAGQSIAFSRPDLTETSVLTMPSNTVIDSSVRPLNLVSTPGRAS 1214

Query: 183  HSPMPNVMGTTGAPSNEPSLRDQLKWHAHQQKIKMQELNEQRRQKNSSVPNVPNVMATTG 362
             S                                                    VM+ + 
Sbjct: 1215 GS----------------------------------------------------VMSASI 1222

Query: 363  APSNEPSLRDQLKWHVHKQKIEMQELNEQRRQKNLYAAVAASRSCLPATSNGSAYSEHLT 542
            +  N  S++ Q++ +  +Q+ + Q +  Q++ +   AA A++RS  PATSNGS Y EH+ 
Sbjct: 1223 STVNASSVQQQVQRN-QQQQHQQQMIQLQKQHQYAAAAAASARSKTPATSNGSVYPEHIP 1281

Query: 543  STSSIAAKFPNAPSSGFPQNFVXXXXXXXXXXXXXXWKNSTRTPTSQVQSPLASSTSS 716
            S+SS+AAKFPNA  SGFP N V              WKNS RT TSQ  S   SSTS+
Sbjct: 1282 SSSSMAAKFPNA-LSGFPSNLV---QSSSSPAQSPQWKNSVRTNTSQAPSSSLSSTST 1335


>ref|XP_003592415.1| Protein TIME FOR COFFEE [Medicago truncatula]
            gi|355481463|gb|AES62666.1| Protein TIME FOR COFFEE
            [Medicago truncatula]
          Length = 1554

 Score =  101 bits (251), Expect = 2e-19
 Identities = 80/241 (33%), Positives = 115/241 (47%), Gaps = 3/241 (1%)
 Frame = +3

Query: 3    SNADEESKVLVGKAQNTGGQSIAFSRPDFTDASGSTLSRNSVVDSSARTLNLSSGPTRPS 182
            SN +E+ K + GK   TGGQ+IAF+R D  D S ++++ N+V+DSS R+LNL S  +R S
Sbjct: 1117 SNLEEDRKAISGKIPTTGGQNIAFARSDVADPSMTSIACNNVIDSSGRSLNLGSASSRAS 1176

Query: 183  HSPMPNVMGTTGAPSNEPSLRDQLKWHAHQQKIKMQELNEQRRQKNSSVPNVPNVMATTG 362
             S MP+ + +  A S                        +Q+ Q+N  +           
Sbjct: 1177 ASGMPSAINSNAAGS------------------------QQQMQRNQQI----------- 1201

Query: 363  APSNEPSLRDQLKWHVHKQKIEMQELNEQRRQKNLYAAVA--ASRSCLPATSNGSAYSEH 536
                                +++Q+ N+       +AA A  A+R+  P+TSNGS YS++
Sbjct: 1202 --------------------LQLQKQNQ-------FAAAAVAAARNKTPSTSNGSIYSDN 1234

Query: 537  LTSTSSIAAKFPNAPSSGFPQNFVXXXXXXXXXXXXXXWKNSTR-TPTSQVQSPLASSTS 713
            L STSSI+ KFPNA S+ FPQ+ V              WKNS R T TS     +AS  S
Sbjct: 1235 LPSTSSISTKFPNAVSA-FPQSLV--QSSNTVVTQSSQWKNSARVTNTSLSPQTMASPPS 1291

Query: 714  S 716
            S
Sbjct: 1292 S 1292


>ref|XP_004170713.1| PREDICTED: protein TIME FOR COFFEE-like, partial [Cucumis sativus]
          Length = 979

 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 83/239 (34%), Positives = 112/239 (46%), Gaps = 1/239 (0%)
 Frame = +3

Query: 3    SNADEESKVLVGKAQNTGGQSIAFSRPDFTDASGSTLSRNS-VVDSSARTLNLSSGPTRP 179
            S  ++E K +  KA  T GQSIAFSR D  + S STL   + +VDS+ARTLNL S   R 
Sbjct: 515  SVGEDERKNMSVKAPPTVGQSIAFSRSDLAETSLSTLPAGAAIVDSTARTLNLGSNAARA 574

Query: 180  SHSPMPNVMGTTGAPSNEPSLRDQLKWHAHQQKIKMQELNEQRRQKNSSVPNVPNVMATT 359
            S S MP+ MGT     ++  L                + N+Q++Q+              
Sbjct: 575  SGSVMPSSMGTVNMCGSQHPL----------------QRNQQQQQQ-------------- 604

Query: 360  GAPSNEPSLRDQLKWHVHKQKIEMQELNEQRRQKNLYAAVAASRSCLPATSNGSAYSEHL 539
                                    Q +  Q++Q+   AA AA+R+    TSNG+ Y EH 
Sbjct: 605  ------------------------QIIQLQKQQQYAAAAAAAARTKTSTTSNGNVYGEH- 639

Query: 540  TSTSSIAAKFPNAPSSGFPQNFVXXXXXXXXXXXXXXWKNSTRTPTSQVQSPLASSTSS 716
            T  SS+AAKFPNA S  + QN V              WKNS RT +SQVQ+P  SS+++
Sbjct: 640  TPASSMAAKFPNALS--YSQNLV--QSNSNSPAQSPQWKNSVRTTSSQVQTPPLSSSNT 694


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