BLASTX nr result

ID: Panax21_contig00016920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016920
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313291.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
emb|CBI24866.3| unnamed protein product [Vitis vinifera]              147   7e-34
ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855...   147   7e-34
ref|XP_002299951.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_003599123.1| Polyadenylate-binding protein 2-A [Medicago ...   129   2e-28

>ref|XP_002313291.1| predicted protein [Populus trichocarpa] gi|222849699|gb|EEE87246.1|
           predicted protein [Populus trichocarpa]
          Length = 762

 Score =  150 bits (379), Expect = 1e-34
 Identities = 74/155 (47%), Positives = 99/155 (63%)
 Frame = -3

Query: 466 ARNELNVFLGDDSDSFVSWLWDHLGSNLDLYVQSKDSCPNEVVKAKSMSRELAGRIDSDH 287
           ARNELNVFLGDDS+SFVSWLWDHL +NLDLYVQ +++  +EV +      E  G  +S H
Sbjct: 98  ARNELNVFLGDDSESFVSWLWDHLATNLDLYVQPQETGTDEVARTNPTLVEQTGGNESHH 157

Query: 286 LNSETEREKPNKLSRSRHGRDWKGLVKNADEPTPLQSAVTANFHAEEATHLKVDQAKRSX 107
           ++SE ++ KP+   R RH R+WKG+V++ +   PL+S+V  N H EE TH +V  A+RS 
Sbjct: 158 MDSEPQKVKPDNSYRGRHKREWKGVVRDVNHRPPLRSSVVVNIHQEEKTHCEVSHARRST 217

Query: 106 XXXXXXXXXXXXPDERTQMKGEEVSKTTINAPRRL 2
                        DER  +K + VS+ T  APRRL
Sbjct: 218 SPQPPQQKKRSQHDERQHVKRDTVSQATSRAPRRL 252


>emb|CBI24866.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  147 bits (372), Expect = 7e-34
 Identities = 82/155 (52%), Positives = 99/155 (63%)
 Frame = -3

Query: 466 ARNELNVFLGDDSDSFVSWLWDHLGSNLDLYVQSKDSCPNEVVKAKSMSRELAGRIDSDH 287
           ARNELNVFLGDDS SFVSWLWDHL S+L LYV  ++S P+E+ + K    E   R DS H
Sbjct: 55  ARNELNVFLGDDSHSFVSWLWDHLDSHLQLYVLPQESYPDEIAETKHTLGEHTERNDSLH 114

Query: 286 LNSETEREKPNKLSRSRHGRDWKGLVKNADEPTPLQSAVTANFHAEEATHLKVDQAKRSX 107
           L+SE+ER    + SRSRH R+WKGL ++  EP PL+S+   +   EE TH KV  AKRS 
Sbjct: 115 LDSESERGNSLR-SRSRHNREWKGLARDGAEPPPLRSSEDDHVQTEEKTHRKVGHAKRSL 173

Query: 106 XXXXXXXXXXXXPDERTQMKGEEVSKTTINAPRRL 2
                       PD+  Q K E VS+ TINAPRRL
Sbjct: 174 SPKHPNQKKRNRPDDLKQAKREVVSQATINAPRRL 208


>ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855398 [Vitis vinifera]
          Length = 700

 Score =  147 bits (372), Expect = 7e-34
 Identities = 82/155 (52%), Positives = 99/155 (63%)
 Frame = -3

Query: 466 ARNELNVFLGDDSDSFVSWLWDHLGSNLDLYVQSKDSCPNEVVKAKSMSRELAGRIDSDH 287
           ARNELNVFLGDDS SFVSWLWDHL S+L LYV  ++S P+E+ + K    E   R DS H
Sbjct: 61  ARNELNVFLGDDSHSFVSWLWDHLDSHLQLYVLPQESYPDEIAETKHTLGEHTERNDSLH 120

Query: 286 LNSETEREKPNKLSRSRHGRDWKGLVKNADEPTPLQSAVTANFHAEEATHLKVDQAKRSX 107
           L+SE+ER    + SRSRH R+WKGL ++  EP PL+S+   +   EE TH KV  AKRS 
Sbjct: 121 LDSESERGNSLR-SRSRHNREWKGLARDGAEPPPLRSSEDDHVQTEEKTHRKVGHAKRSL 179

Query: 106 XXXXXXXXXXXXPDERTQMKGEEVSKTTINAPRRL 2
                       PD+  Q K E VS+ TINAPRRL
Sbjct: 180 SPKHPNQKKRNRPDDLKQAKREVVSQATINAPRRL 214


>ref|XP_002299951.1| predicted protein [Populus trichocarpa] gi|222847209|gb|EEE84756.1|
           predicted protein [Populus trichocarpa]
          Length = 678

 Score =  145 bits (367), Expect = 3e-33
 Identities = 75/156 (48%), Positives = 98/156 (62%), Gaps = 1/156 (0%)
 Frame = -3

Query: 466 ARNELNVFLGDDSDSFVSWLWDHLGSNLDLYVQSKDSCPNEVVKAKSMSRELAGRIDSDH 287
           ARNELNVFLGDDSDSFVSWLWDHL +NLD+YVQ  ++  +EV +      E  G  +S  
Sbjct: 57  ARNELNVFLGDDSDSFVSWLWDHLATNLDMYVQPPETHADEVARTNPTLIEQTGGNESHQ 116

Query: 286 LNSETEREKPNKLSRSRHGRDWKGLVKNADEPTPLQSAVTANFHAEEATHLKVDQAKRSX 107
           L+SE E  KP+  SR RH R+WKG+ ++ ++P PL+S+V  N H EE TH K  +A+RS 
Sbjct: 117 LDSEHENVKPDNSSRGRHKREWKGVARDVNQPPPLRSSVVDNIHLEEKTHGKASRARRSP 176

Query: 106 XXXXXXXXXXXXPDERTQMKGEE-VSKTTINAPRRL 2
                        DE+  +K  + VS+ T  APRRL
Sbjct: 177 SPQPPQEQKRSRHDEQQHVKQRDAVSQATSGAPRRL 212


>ref|XP_003599123.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
           gi|355488171|gb|AES69374.1| Polyadenylate-binding
           protein 2-A [Medicago truncatula]
          Length = 685

 Score =  129 bits (324), Expect = 2e-28
 Identities = 73/155 (47%), Positives = 89/155 (57%)
 Frame = -3

Query: 466 ARNELNVFLGDDSDSFVSWLWDHLGSNLDLYVQSKDSCPNEVVKAKSMSRELAGRIDSDH 287
           A+NELNVFLGDDSDSFVSWLWDHL  NL LYV+  +   +E  K K +S   AG     H
Sbjct: 62  AKNELNVFLGDDSDSFVSWLWDHLHLNLALYVKP-EKLQDEAPKRKLISEIKAGDDGLQH 120

Query: 286 LNSETEREKPNKLSRSRHGRDWKGLVKNADEPTPLQSAVTANFHAEEATHLKVDQAKRSX 107
             SE ER   NK SRSRH +DWKGLVK   E   ++S    N H EE     V++++RS 
Sbjct: 121 SKSELERGNSNKFSRSRHNKDWKGLVKGEAEAPTIRSFEVDNAHVEEKVRSNVNRSRRSP 180

Query: 106 XXXXXXXXXXXXPDERTQMKGEEVSKTTINAPRRL 2
                        DE+ + K + VS+  I APRRL
Sbjct: 181 SPKPAVQRKRGRADEQQRPKRDVVSQVNIAAPRRL 215


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