BLASTX nr result
ID: Panax21_contig00016904
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00016904 (361 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|35551... 62 6e-08 ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|35551... 62 6e-08 ref|XP_002311806.1| hypothetical protein POPTRDRAFT_766749 [Popu... 59 3e-07 ref|XP_002311805.1| chromatin remodeling complex subunit [Populu... 59 3e-07 >ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|355510630|gb|AES91772.1| Helicase swr1 [Medicago truncatula] Length = 3310 Score = 61.6 bits (148), Expect = 6e-08 Identities = 32/81 (39%), Positives = 49/81 (60%) Frame = -3 Query: 344 QGGEHGQFNNMIQSNSQTDHSALLTSAMKSVLRAKQETQHQAEKSLDSANVSTSLSRASH 165 + GE F+ ++ +NSQ ++ + + MK++LRA E H K DS N+ RA + Sbjct: 246 KSGEMTNFS-VVPNNSQMENISTFSGNMKTMLRANPEGHHLLAKQTDSTNIGNPTGRAPN 304 Query: 164 SRHPEEIEVSSAHNALGLHQG 102 S++PE++EVSSAH A G QG Sbjct: 305 SKYPEDLEVSSAHIAPGKQQG 325 >ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|355510629|gb|AES91771.1| Helicase swr1 [Medicago truncatula] Length = 3312 Score = 61.6 bits (148), Expect = 6e-08 Identities = 32/81 (39%), Positives = 49/81 (60%) Frame = -3 Query: 344 QGGEHGQFNNMIQSNSQTDHSALLTSAMKSVLRAKQETQHQAEKSLDSANVSTSLSRASH 165 + GE F+ ++ +NSQ ++ + + MK++LRA E H K DS N+ RA + Sbjct: 246 KSGEMTNFS-VVPNNSQMENISTFSGNMKTMLRANPEGHHLLAKQTDSTNIGNPTGRAPN 304 Query: 164 SRHPEEIEVSSAHNALGLHQG 102 S++PE++EVSSAH A G QG Sbjct: 305 SKYPEDLEVSSAHIAPGKQQG 325 >ref|XP_002311806.1| hypothetical protein POPTRDRAFT_766749 [Populus trichocarpa] gi|222851626|gb|EEE89173.1| hypothetical protein POPTRDRAFT_766749 [Populus trichocarpa] Length = 539 Score = 59.3 bits (142), Expect = 3e-07 Identities = 30/63 (47%), Positives = 42/63 (66%) Frame = -3 Query: 191 STSLSRASHSRHPEEIEVSSAHNALGLHQGGSLSSTHDVLNSRGLLNQTKIGLPFEKSQV 12 +TS ++ +S ++EVSS+ + G QGGSL S H+ L SRG+ NQ K GLP E+S + Sbjct: 39 NTSFNKVPNSG---QLEVSSSFVSAGQQQGGSLPSAHESLTSRGMWNQNKAGLPLERSHI 95 Query: 11 PRF 3 PRF Sbjct: 96 PRF 98 >ref|XP_002311805.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222851625|gb|EEE89172.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 3427 Score = 59.3 bits (142), Expect = 3e-07 Identities = 30/63 (47%), Positives = 42/63 (66%) Frame = -3 Query: 191 STSLSRASHSRHPEEIEVSSAHNALGLHQGGSLSSTHDVLNSRGLLNQTKIGLPFEKSQV 12 +TS ++ +S ++EVSS+ + G QGGSL S H+ L SRG+ NQ K GLP E+S + Sbjct: 176 NTSFNKVPNSG---QLEVSSSFVSAGQQQGGSLPSAHESLTSRGMWNQNKAGLPLERSHI 232 Query: 11 PRF 3 PRF Sbjct: 233 PRF 235