BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016894
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...   104   8e-21
emb|CBI35661.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002297869.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ...    78   8e-13
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...    71   1e-10

>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Vitis vinifera]
          Length = 1238

 Score =  104 bits (259), Expect = 8e-21
 Identities = 60/124 (48%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
 Frame = +2

Query: 2   NAPNLSKAIVSSVPHMDISSEQGLMNDRNATPLSSGSITE--VRGSVRSRDPRIRFANSS 175
           NAP L   IVSS P MD S  QG    RN + +SSG   +  V  S +SRDPR+R A+S 
Sbjct: 485 NAPALGHPIVSSAPQMDSSIVQGPTVGRNTSLVSSGPHLDSSVVASAKSRDPRLRLASSD 544

Query: 176 AAVMDLNQNILPVSNNEPTVVPLGEMISSRKQKIVQESALDGPALKRQRSELSDFGRARY 355
           A  +DLN+  LP  +N P V PLGE++SSRKQK  +E  LDGP  KRQR+ L+     R 
Sbjct: 545 AGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLTSPATVRD 604

Query: 356 VESV 367
            ++V
Sbjct: 605 AQTV 608


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score =  103 bits (257), Expect = 1e-20
 Identities = 57/111 (51%), Positives = 73/111 (65%)
 Frame = +2

Query: 2   NAPNLSKAIVSSVPHMDISSEQGLMNDRNATPLSSGSITEVRGSVRSRDPRIRFANSSAA 181
           NAP L   IVSS P MDI   QGL+  RN   ++S   + +R S +SRDPR+R A+S A 
Sbjct: 471 NAPALGHPIVSSAPQMDIV--QGLVVPRNTGAVNSRFNSILRASAKSRDPRLRLASSDAG 528

Query: 182 VMDLNQNILPVSNNEPTVVPLGEMISSRKQKIVQESALDGPALKRQRSELS 334
            +DLN+  LP  +N P V PLGE++SSRKQK  +E  LDGP  KRQR+ L+
Sbjct: 529 SLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLT 579


>ref|XP_002297869.1| predicted protein [Populus trichocarpa] gi|222845127|gb|EEE82674.1|
           predicted protein [Populus trichocarpa]
          Length = 1117

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/122 (41%), Positives = 76/122 (62%)
 Frame = +2

Query: 2   NAPNLSKAIVSSVPHMDISSEQGLMNDRNATPLSSGSITEVRGSVRSRDPRIRFANSSAA 181
           NAP     +    PH D S+ +G++  RN+ P+SSG  + ++ S +SRDPR+R+ N  A 
Sbjct: 359 NAPPSPPPLPPPPPHPDSSNIRGVVPTRNSAPVSSGPSSTIKASAKSRDPRLRYVNIDAC 418

Query: 182 VMDLNQNILPVSNNEPTVVPLGEMISSRKQKIVQESALDGPALKRQRSELSDFGRARYVE 361
            +D NQ  LP+ NN P V P G ++ S+K KI +E  LD P+LKRQR+   ++G  R +E
Sbjct: 419 ALDHNQRALPMVNNLPRVEPAGAIVGSKKHKI-EEDVLDDPSLKRQRNSFDNYGAVRDIE 477

Query: 362 SV 367
           S+
Sbjct: 478 SM 479


>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
           gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
           phosphatase, putative [Ricinus communis]
          Length = 1195

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 43/111 (38%), Positives = 68/111 (61%)
 Frame = +2

Query: 35  SVPHMDISSEQGLMNDRNATPLSSGSITEVRGSVRSRDPRIRFANSSAAVMDLNQNILPV 214
           S+P MD SS  G+++ ++A   SS     V+ S +SRDPR+RF NS +  +D N   +PV
Sbjct: 431 SLPRMDGSSLPGVISIKSAVRASSAPSLTVKASAKSRDPRLRFVNSDSNALDQNHRAVPV 490

Query: 215 SNNEPTVVPLGEMISSRKQKIVQESALDGPALKRQRSELSDFGRARYVESV 367
            N    V P+G  ++ ++QKIV +   DG +LKRQ++ L + G  R V+++
Sbjct: 491 VNT-LKVEPIGGTMNKKRQKIVDDPIPDGHSLKRQKNALENSGVVRDVKTM 540


>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   NAPNLSKAIVSSVPHMDISSEQGLMNDRNATPLSSGSITEVRGSV-RSRDPRIRFANSSA 178
           N  ++ + I+SSVP  +I   QGL   R A PLS      +R S  +SRDPR+R A S  
Sbjct: 453 NESSMGQPILSSVPQTNILDGQGLGTTRTADPLSFLPNPSLRSSTAKSRDPRLRLATSDT 512

Query: 179 AVMDLNQNILPVSNNEPTVVPLGEMISSRKQKIVQESALDGPALKRQRSELSD 337
              +    ILP+ + +  +    EMI S+KQK V  SA D P  KRQRSE +D
Sbjct: 513 VAQN---TILPIPDIDLKLEASLEMIVSKKQKTVDLSAFDAPLPKRQRSEQTD 562