BLASTX nr result
ID: Panax21_contig00016894
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00016894 (367 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma... 104 8e-21 emb|CBI35661.3| unnamed protein product [Vitis vinifera] 103 1e-20 ref|XP_002297869.1| predicted protein [Populus trichocarpa] gi|2... 103 2e-20 ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ... 78 8e-13 gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly... 71 1e-10 >ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3-like [Vitis vinifera] Length = 1238 Score = 104 bits (259), Expect = 8e-21 Identities = 60/124 (48%), Positives = 76/124 (61%), Gaps = 2/124 (1%) Frame = +2 Query: 2 NAPNLSKAIVSSVPHMDISSEQGLMNDRNATPLSSGSITE--VRGSVRSRDPRIRFANSS 175 NAP L IVSS P MD S QG RN + +SSG + V S +SRDPR+R A+S Sbjct: 485 NAPALGHPIVSSAPQMDSSIVQGPTVGRNTSLVSSGPHLDSSVVASAKSRDPRLRLASSD 544 Query: 176 AAVMDLNQNILPVSNNEPTVVPLGEMISSRKQKIVQESALDGPALKRQRSELSDFGRARY 355 A +DLN+ LP +N P V PLGE++SSRKQK +E LDGP KRQR+ L+ R Sbjct: 545 AGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLTSPATVRD 604 Query: 356 VESV 367 ++V Sbjct: 605 AQTV 608 >emb|CBI35661.3| unnamed protein product [Vitis vinifera] Length = 1184 Score = 103 bits (257), Expect = 1e-20 Identities = 57/111 (51%), Positives = 73/111 (65%) Frame = +2 Query: 2 NAPNLSKAIVSSVPHMDISSEQGLMNDRNATPLSSGSITEVRGSVRSRDPRIRFANSSAA 181 NAP L IVSS P MDI QGL+ RN ++S + +R S +SRDPR+R A+S A Sbjct: 471 NAPALGHPIVSSAPQMDIV--QGLVVPRNTGAVNSRFNSILRASAKSRDPRLRLASSDAG 528 Query: 182 VMDLNQNILPVSNNEPTVVPLGEMISSRKQKIVQESALDGPALKRQRSELS 334 +DLN+ LP +N P V PLGE++SSRKQK +E LDGP KRQR+ L+ Sbjct: 529 SLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLT 579 >ref|XP_002297869.1| predicted protein [Populus trichocarpa] gi|222845127|gb|EEE82674.1| predicted protein [Populus trichocarpa] Length = 1117 Score = 103 bits (256), Expect = 2e-20 Identities = 51/122 (41%), Positives = 76/122 (62%) Frame = +2 Query: 2 NAPNLSKAIVSSVPHMDISSEQGLMNDRNATPLSSGSITEVRGSVRSRDPRIRFANSSAA 181 NAP + PH D S+ +G++ RN+ P+SSG + ++ S +SRDPR+R+ N A Sbjct: 359 NAPPSPPPLPPPPPHPDSSNIRGVVPTRNSAPVSSGPSSTIKASAKSRDPRLRYVNIDAC 418 Query: 182 VMDLNQNILPVSNNEPTVVPLGEMISSRKQKIVQESALDGPALKRQRSELSDFGRARYVE 361 +D NQ LP+ NN P V P G ++ S+K KI +E LD P+LKRQR+ ++G R +E Sbjct: 419 ALDHNQRALPMVNNLPRVEPAGAIVGSKKHKI-EEDVLDDPSLKRQRNSFDNYGAVRDIE 477 Query: 362 SV 367 S+ Sbjct: 478 SM 479 >ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis] gi|223548611|gb|EEF50102.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis] Length = 1195 Score = 77.8 bits (190), Expect = 8e-13 Identities = 43/111 (38%), Positives = 68/111 (61%) Frame = +2 Query: 35 SVPHMDISSEQGLMNDRNATPLSSGSITEVRGSVRSRDPRIRFANSSAAVMDLNQNILPV 214 S+P MD SS G+++ ++A SS V+ S +SRDPR+RF NS + +D N +PV Sbjct: 431 SLPRMDGSSLPGVISIKSAVRASSAPSLTVKASAKSRDPRLRFVNSDSNALDQNHRAVPV 490 Query: 215 SNNEPTVVPLGEMISSRKQKIVQESALDGPALKRQRSELSDFGRARYVESV 367 N V P+G ++ ++QKIV + DG +LKRQ++ L + G R V+++ Sbjct: 491 VNT-LKVEPIGGTMNKKRQKIVDDPIPDGHSLKRQKNALENSGVVRDVKTM 540 >gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum] Length = 1227 Score = 70.9 bits (172), Expect = 1e-10 Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 1/113 (0%) Frame = +2 Query: 2 NAPNLSKAIVSSVPHMDISSEQGLMNDRNATPLSSGSITEVRGSV-RSRDPRIRFANSSA 178 N ++ + I+SSVP +I QGL R A PLS +R S +SRDPR+R A S Sbjct: 453 NESSMGQPILSSVPQTNILDGQGLGTTRTADPLSFLPNPSLRSSTAKSRDPRLRLATSDT 512 Query: 179 AVMDLNQNILPVSNNEPTVVPLGEMISSRKQKIVQESALDGPALKRQRSELSD 337 + ILP+ + + + EMI S+KQK V SA D P KRQRSE +D Sbjct: 513 VAQN---TILPIPDIDLKLEASLEMIVSKKQKTVDLSAFDAPLPKRQRSEQTD 562