BLASTX nr result

ID: Panax21_contig00016888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016888
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139256.1| PREDICTED: biotin carboxyl carrier protein o...    59   7e-14
gb|AFK44602.1| unknown [Lotus japonicus]                               53   1e-12
ref|XP_003618716.1| Biotin carboxyl carrier protein of acetyl-Co...    49   5e-12
ref|XP_002323896.1| predicted protein [Populus trichocarpa] gi|2...    52   1e-11
ref|XP_003543944.1| PREDICTED: biotin carboxyl carrier protein o...    55   1e-11

>ref|XP_004139256.1| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase 1, chloroplastic-like [Cucumis sativus]
           gi|449520837|ref|XP_004167439.1| PREDICTED: biotin
           carboxyl carrier protein of acetyl-CoA carboxylase 1,
           chloroplastic-like [Cucumis sativus]
          Length = 276

 Score = 59.3 bits (142), Expect(2) = 7e-14
 Identities = 31/55 (56%), Positives = 39/55 (70%)
 Frame = -3

Query: 332 KFLGCLLS*MRLVDSRDIRELQLKQRDCEVLIKKKEALPPQPPVTARSICYDAVP 168
           +F+  + S ++LVDSRDI ELQLKQ DCEV+I+KKEALP  PP  A  + Y   P
Sbjct: 108 EFITQVSSLIKLVDSRDIVELQLKQLDCEVVIRKKEALPQPPPPAAIPMMYAPPP 162



 Score = 42.4 bits (98), Expect(2) = 7e-14
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -1

Query: 55  SSHPPLKCPMAGTFYRCP 2
           SS PPLKCPMAGTFYRCP
Sbjct: 197 SSLPPLKCPMAGTFYRCP 214


>gb|AFK44602.1| unknown [Lotus japonicus]
          Length = 284

 Score = 52.8 bits (125), Expect(2) = 1e-12
 Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 4/54 (7%)
 Frame = -3

Query: 305 MRLVDSRDIRELQLKQRDCEVLIKKKEAL--PPQPPV--TARSICYDAVPFSTS 156
           ++LVDSRDI ELQLKQ DCE++I+K+EAL  PP P V   + S  Y  +P S S
Sbjct: 122 VKLVDSRDIVELQLKQSDCELMIRKREALHPPPAPAVAPASPSFYYPPLPSSPS 175



 Score = 45.1 bits (105), Expect(2) = 1e-12
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -1

Query: 67  EKPKSSHPPLKCPMAGTFYRCP 2
           ++ KSSHPPLKCPMAGTFYR P
Sbjct: 201 KESKSSHPPLKCPMAGTFYRSP 222


>ref|XP_003618716.1| Biotin carboxyl carrier protein of acetyl-CoA carboxylase [Medicago
           truncatula] gi|355493731|gb|AES74934.1| Biotin carboxyl
           carrier protein of acetyl-CoA carboxylase [Medicago
           truncatula]
          Length = 278

 Score = 48.9 bits (115), Expect(2) = 5e-12
 Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
 Frame = -3

Query: 299 LVDSRDIRELQLKQRDCEVLIKKKEALPPQP----PVTARSICYDAVP 168
           LVDSRDI ELQLKQ D E++I+KKEAL P P    P +A  + Y  +P
Sbjct: 119 LVDSRDIVELQLKQSDYELVIRKKEALQPPPATAMPQSAPPLYYPTLP 166



 Score = 46.6 bits (109), Expect(2) = 5e-12
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = -1

Query: 55  SSHPPLKCPMAGTFYRCP 2
           SSHPPLKCPMAGTFYRCP
Sbjct: 199 SSHPPLKCPMAGTFYRCP 216


>ref|XP_002323896.1| predicted protein [Populus trichocarpa] gi|222866898|gb|EEF04029.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score = 51.6 bits (122), Expect(2) = 1e-11
 Identities = 26/49 (53%), Positives = 32/49 (65%)
 Frame = -3

Query: 305 MRLVDSRDIRELQLKQRDCEVLIKKKEALPPQPPVTARSICYDAVPFST 159
           ++LVDSRDI ELQLKQ DCE++I+KKEAL    P  A        P +T
Sbjct: 123 VKLVDSRDITELQLKQSDCELVIRKKEALQQSAPAAAILAMQPPYPHAT 171



 Score = 42.7 bits (99), Expect(2) = 1e-11
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -1

Query: 55  SSHPPLKCPMAGTFYRCP 2
           SSHPPLKCPMAGTFYR P
Sbjct: 205 SSHPPLKCPMAGTFYRSP 222


>ref|XP_003543944.1| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase 2, chloroplastic-like [Glycine max]
          Length = 276

 Score = 54.7 bits (130), Expect(2) = 1e-11
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
 Frame = -3

Query: 380 NSQQHGLAVHLTGTSMKFLGCLLS*MRLVDSRDIRELQLKQRDCEVLIKKKEALPPQPPV 201
           N +  G  +    + + F+  +   ++LVDSRDI ELQLKQ DCE++I+KKEAL P P +
Sbjct: 94  NGKLSGGTIPDDASIIAFMSQVSDLVKLVDSRDIVELQLKQSDCELMIRKKEALQPPPVI 153

Query: 200 --TARSICYDAVP 168
             T+  + Y  VP
Sbjct: 154 APTSPPMHYATVP 166



 Score = 39.7 bits (91), Expect(2) = 1e-11
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -1

Query: 55  SSHPPLKCPMAGTFYRCP 2
           SSHP LKCPMAGTFYR P
Sbjct: 197 SSHPTLKCPMAGTFYRSP 214


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