BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016877
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36966.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containi...    65   6e-09
ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thalia...    61   8e-08
ref|XP_002881173.1| pentatricopeptide repeat-containing protein ...    59   4e-07

>emb|CBI36966.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +2

Query: 200 NFTAPKVSLNHH--KPRNAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRR 373
           ++++ KVSL +    PRNAA P +  P T                  KSE +A DFSGRR
Sbjct: 35  HWSSHKVSLTNPLPSPRNAAKPGAASPATATNRNSNFPSLSPLPPS-KSELTA-DFSGRR 92

Query: 374 STRYVSKIHFGRQKTTAASRHTST 445
           STR+VSK+HFGR KT AA+RHTST
Sbjct: 93  STRFVSKMHFGRPKTAAAARHTST 116


>ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +2

Query: 200 NFTAPKVSLNHH--KPRNAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRR 373
           ++++ KVSL +    PRNAA P +  P T                  KSE +A DFSGRR
Sbjct: 35  HWSSHKVSLTNPLPSPRNAAKPGAASPATATNRNSNFPSLSPLPPS-KSELTA-DFSGRR 92

Query: 374 STRYVSKIHFGRQKTTAASRHTST 445
           STR+VSK+HFGR KT AA+RHTST
Sbjct: 93  STRFVSKMHFGRPKTAAAARHTST 116


>ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
           gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g31400, chloroplastic; Flags: Precursor
           gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis
           thaliana] gi|330253448|gb|AEC08542.1| genomes uncoupled
           1 protein [Arabidopsis thaliana]
          Length = 918

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/68 (51%), Positives = 42/68 (61%)
 Frame = +2

Query: 239 PRNAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQKT 418
           PR +A PPS +  T                  KS+ S SDFSGRRSTR+VSK+HFGRQKT
Sbjct: 98  PRGSAPPPSSVA-TVAPAQLSQPPNFSPLQTPKSDLS-SDFSGRRSTRFVSKMHFGRQKT 155

Query: 419 TAASRHTS 442
           T A+RH+S
Sbjct: 156 TMATRHSS 163


>ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327012|gb|EFH57432.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 917

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/68 (50%), Positives = 41/68 (60%)
 Frame = +2

Query: 239 PRNAANPPSRIPKTTXXXXXXXXXXXXXXXXXKSEFSASDFSGRRSTRYVSKIHFGRQKT 418
           PR +A PPS +  T                  KS+ S SDFSGRRSTR+VSK+HFGR KT
Sbjct: 98  PRGSAPPPSSVA-TVAPAQLSQTPNFSPLQTPKSDLS-SDFSGRRSTRFVSKMHFGRPKT 155

Query: 419 TAASRHTS 442
           T A+RH+S
Sbjct: 156 TMATRHSS 163