BLASTX nr result

ID: Panax21_contig00016873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016873
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA05629.1| membrane-associated salt-inducible protein like ...    57   2e-06
ref|NP_195386.1| pentatricopeptide repeat-containing protein [Ar...    57   2e-06
ref|XP_002866998.1| pentatricopeptide repeat-containing protein ...    56   3e-06

>emb|CAA05629.1| membrane-associated salt-inducible protein like [Arabidopsis
           thaliana]
          Length = 428

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = -1

Query: 400 AKGLIRTAKKKFPPSFLNSWEKIEEEFGLVS 308
           AKGLIRT KKKFPPSFLN+W+K+EEE GL S
Sbjct: 383 AKGLIRTVKKKFPPSFLNAWKKLEEELGLYS 413


>ref|NP_195386.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75181418|sp|Q9M065.1|PP352_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g36680, mitochondrial; Flags: Precursor
           gi|2464912|emb|CAB16807.1| salt-inducible like protein
           [Arabidopsis thaliana] gi|7270616|emb|CAB80334.1|
           salt-inducible like protein [Arabidopsis thaliana]
           gi|17381286|gb|AAL36061.1| C7A10_680/C7A10_680
           [Arabidopsis thaliana] gi|24111267|gb|AAN46757.1|
           At4g36680/C7A10_680 [Arabidopsis thaliana]
           gi|332661286|gb|AEE86686.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 412

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = -1

Query: 400 AKGLIRTAKKKFPPSFLNSWEKIEEEFGLVS 308
           AKGLIRT KKKFPPSFLN+W+K+EEE GL S
Sbjct: 367 AKGLIRTVKKKFPPSFLNAWKKLEEELGLYS 397


>ref|XP_002866998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312834|gb|EFH43257.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 411

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = -1

Query: 400 AKGLIRTAKKKFPPSFLNSWEKIEEEFGLVS 308
           AKGLIRT KKKFPPSF+N+W+K+EEE GL S
Sbjct: 367 AKGLIRTVKKKFPPSFMNAWKKLEEELGLYS 397


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