BLASTX nr result

ID: Panax21_contig00016862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016862
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524951.1| Protein FRIGIDA, putative [Ricinus communis]...   174   2e-41
ref|XP_002283930.2| PREDICTED: protein FRIGIDA-like isoform 2 [V...   167   2e-39
ref|XP_002283922.2| PREDICTED: protein FRIGIDA-like isoform 1 [V...   167   2e-39
ref|XP_002332230.1| predicted protein [Populus trichocarpa] gi|2...   150   3e-34
emb|CBI33736.3| unnamed protein product [Vitis vinifera]              107   2e-21

>ref|XP_002524951.1| Protein FRIGIDA, putative [Ricinus communis]
           gi|223535786|gb|EEF37448.1| Protein FRIGIDA, putative
           [Ricinus communis]
          Length = 570

 Score =  174 bits (440), Expect = 2e-41
 Identities = 90/163 (55%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
 Frame = +1

Query: 64  ELAALKAVIHCVQDYKLEADYPLDPLQRRVAQLEKTRPGKKRLGESGKHQQMKKTRANGG 243
           ELA LKAVI CV++YKLEADYPLDPLQRRVAQL K++  KKR G+  +H Q KK RANGG
Sbjct: 412 ELATLKAVIRCVEEYKLEADYPLDPLQRRVAQLAKSKSDKKRTGDFNRHHQSKKPRANGG 471

Query: 244 FHGYRXXXXXXXXXXXXXXXVFGERT-YAGKAERYPHAVPNTYNYQAPTQSTYGQPAYDQ 420
           +  +R               V+ ERT Y G  ERYPH  PN Y+YQ P+QS YGQPA DQ
Sbjct: 472 YRRFRGGAAPGTTGVRQAPPVYAERTPYTGMPERYPHVGPNPYDYQIPSQSAYGQPATDQ 531

Query: 421 RSYYYLHDERVXXXXXXXXXXXXXXSYDSYMGSGMPSSHQPYI 549
           R YYY  D+RV              SY SYMG+GM  SHQPY+
Sbjct: 532 RMYYYPADDRV----PTGSYDAAPSSYSSYMGTGMRPSHQPYM 570


>ref|XP_002283930.2| PREDICTED: protein FRIGIDA-like isoform 2 [Vitis vinifera]
          Length = 577

 Score =  167 bits (424), Expect = 2e-39
 Identities = 91/166 (54%), Positives = 110/166 (66%), Gaps = 4/166 (2%)
 Frame = +1

Query: 64  ELAALKAVIHCVQDYKLEADYPLDPLQRRVAQLEKTRPGKKRLGESGKHQQMKKTRANGG 243
           ELAALKAVI CV++YKLEADY LDPLQ+RVAQLEK++  KKR+GE+GK+QQ KK RANGG
Sbjct: 417 ELAALKAVIRCVEEYKLEADYALDPLQKRVAQLEKSKADKKRMGEAGKYQQPKKQRANGG 476

Query: 244 FHGYRXXXXXXXXXXXXXXXVFGERTYAGKAERYPHA----VPNTYNYQAPTQSTYGQPA 411
           FHG+R               VF ER  A   ERYP+A     PNT++Y  P+Q+ Y Q A
Sbjct: 477 FHGFRGSASGGAAAGRQAPPVFSERA-AYTVERYPYAGPGPGPNTFDYPLPSQAAYIQQA 535

Query: 412 YDQRSYYYLHDERVXXXXXXXXXXXXXXSYDSYMGSGMPSSHQPYI 549
            DQRSY+Y  D+RV              +Y SYMGSG+ SSHQPY+
Sbjct: 536 NDQRSYFYPQDDRV----PPSSYNAAPSNYGSYMGSGLQSSHQPYM 577


>ref|XP_002283922.2| PREDICTED: protein FRIGIDA-like isoform 1 [Vitis vinifera]
          Length = 577

 Score =  167 bits (424), Expect = 2e-39
 Identities = 91/166 (54%), Positives = 110/166 (66%), Gaps = 4/166 (2%)
 Frame = +1

Query: 64  ELAALKAVIHCVQDYKLEADYPLDPLQRRVAQLEKTRPGKKRLGESGKHQQMKKTRANGG 243
           ELAALKAVI CV++YKLEADY LDPLQ+RVAQLEK++  KKR+GE+GK+QQ KK RANGG
Sbjct: 417 ELAALKAVIRCVEEYKLEADYALDPLQKRVAQLEKSKADKKRMGEAGKYQQPKKQRANGG 476

Query: 244 FHGYRXXXXXXXXXXXXXXXVFGERTYAGKAERYPHA----VPNTYNYQAPTQSTYGQPA 411
           FHG+R               VF ER  A   ERYP+A     PNT++Y  P+Q+ Y Q A
Sbjct: 477 FHGFRGSASGGAAAGRQAPPVFSERA-AYTVERYPYAGPGPGPNTFDYPLPSQAAYIQQA 535

Query: 412 YDQRSYYYLHDERVXXXXXXXXXXXXXXSYDSYMGSGMPSSHQPYI 549
            DQRSY+Y  D+RV              +Y SYMGSG+ SSHQPY+
Sbjct: 536 NDQRSYFYPQDDRV----PPSSYNAAPSNYGSYMGSGLQSSHQPYM 577


>ref|XP_002332230.1| predicted protein [Populus trichocarpa] gi|222831843|gb|EEE70320.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  150 bits (379), Expect = 3e-34
 Identities = 82/163 (50%), Positives = 97/163 (59%), Gaps = 1/163 (0%)
 Frame = +1

Query: 64  ELAALKAVIHCVQDYKLEADYPLDPLQRRVAQLEKTRPGKKRLGESGKHQQMKKTRANGG 243
           ELAALK VI CV++YKLEADYPLDPLQ+R+AQLEK++  KKR G+ GKH Q KK + N G
Sbjct: 240 ELAALKVVIRCVEEYKLEADYPLDPLQKRLAQLEKSKSDKKRAGDFGKHYQSKKPKVNRG 299

Query: 244 FHGYRXXXXXXXXXXXXXXXVFGERTYAGK-AERYPHAVPNTYNYQAPTQSTYGQPAYDQ 420
           + G R                     Y G   ERYPH VPN Y YQ P+QS YGQ A DQ
Sbjct: 300 YRGLRGAATGPASGWRAPPP---WTAYPGMLPERYPHTVPNPYEYQIPSQSAYGQQANDQ 356

Query: 421 RSYYYLHDERVXXXXXXXXXXXXXXSYDSYMGSGMPSSHQPYI 549
           + YY   D+RV              +Y SYMG+G  SSHQPY+
Sbjct: 357 KMYYNPQDDRV---TAASSYSAAPPNYGSYMGAGTRSSHQPYM 396


>emb|CBI33736.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/65 (76%), Positives = 59/65 (90%)
 Frame = +1

Query: 64  ELAALKAVIHCVQDYKLEADYPLDPLQRRVAQLEKTRPGKKRLGESGKHQQMKKTRANGG 243
           ELAALKAVI CV++YKLEADY LDPLQ+RVAQLEK++  KKR+GE+GK+QQ KK RANGG
Sbjct: 239 ELAALKAVIRCVEEYKLEADYALDPLQKRVAQLEKSKADKKRMGEAGKYQQPKKQRANGG 298

Query: 244 FHGYR 258
           FHG+R
Sbjct: 299 FHGFR 303


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