BLASTX nr result

ID: Panax21_contig00016859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016859
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloropl...   498   e-139
ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana] ...   432   e-119
dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]                      429   e-118
gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana] gi|2...   428   e-117
ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. ly...   428   e-117

>ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloroplastic [Vitis vinifera]
            gi|296089917|emb|CBI39736.3| unnamed protein product
            [Vitis vinifera]
          Length = 522

 Score =  498 bits (1283), Expect = e-139
 Identities = 250/337 (74%), Positives = 281/337 (83%), Gaps = 4/337 (1%)
 Frame = +2

Query: 68   GMACKCMERRGCYGFSSSPIRDFCFEKR-KIWKNRRHLLTIPLFK-KGFSRWRSVSATNR 241
            G+ACKC ER G YGF     R   F+KR +I KN R++  IPLFK  G   WRS++A N 
Sbjct: 6    GVACKCTER-GIYGF-----RGARFDKRSRIRKNLRNVSMIPLFKHNGLFIWRSIAANNC 59

Query: 242  IFSMDLREKSRSTLSESSKHKRVPVYVMMPIDSFCIDTFGVPRIRKIKALTISLKALKLA 421
            IFSMD REKSRST  E+  HKRVP++VMMP+DSF IDT G PRIR+IKALTISLKALKLA
Sbjct: 60   IFSMDAREKSRSTTLETPGHKRVPIFVMMPVDSFGIDTSGAPRIRRIKALTISLKALKLA 119

Query: 422  GVHGIAVEVWWGIVET-SPLVYNWSLYEEFFELISEVGLKLQVALSFHSNMHLSSPGHG- 595
            GVHGIAVEVWWGIVE  SP VYNWSLYEE F+LISE GLKL VALSFHSNMH SS   G 
Sbjct: 120  GVHGIAVEVWWGIVERFSPFVYNWSLYEELFKLISESGLKLHVALSFHSNMHSSSRVKGG 179

Query: 596  VSLPQWIMEIGNLNKDIYYRDRNGYTNDDYLTLGVDHNPLFCGRTGLQCYEDFLLNFADK 775
            VSLP WI+EIG+LNKDIYYRD+NG++NDDYLTLGVD  PLFCGRT LQCYEDF+ +F +K
Sbjct: 180  VSLPLWIVEIGDLNKDIYYRDQNGFSNDDYLTLGVDELPLFCGRTALQCYEDFMFSFINK 239

Query: 776  FGSLMGTLIEEISVGLGPCGELRYPAHPFGDGRWQFPGIGEFQCYDKYMMEDLKIASWEE 955
            F S +G++IEEISVGLGP GELRYPAHPFGDGRW+FPGIGEFQCYDKYMM DLKIA+ +E
Sbjct: 240  FESFIGSVIEEISVGLGPSGELRYPAHPFGDGRWRFPGIGEFQCYDKYMMRDLKIAACQE 299

Query: 956  GKPHWGNKGPQNAGNYNSIPFGIPFFEEGQENFLSDY 1066
            GKP WG+KGPQNAG YNS+P G+PFFEEGQE+FLSDY
Sbjct: 300  GKPQWGDKGPQNAGYYNSLPSGVPFFEEGQESFLSDY 336


>ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana]
            gi|75334054|sp|Q9FM68.1|BAM4_ARATH RecName: Full=Inactive
            beta-amylase 4, chloroplastic; AltName: Full=Inactive
            beta-amylase 6; Flags: Precursor
            gi|9758604|dbj|BAB09237.1| beta-amylase [Arabidopsis
            thaliana] gi|332009286|gb|AED96669.1| inactive
            beta-amylase 4 [Arabidopsis thaliana]
          Length = 531

 Score =  432 bits (1111), Expect = e-119
 Identities = 209/316 (66%), Positives = 252/316 (79%), Gaps = 6/316 (1%)
 Frame = +2

Query: 137  CFEKRKIWKNR---RHLLTIPLFKKG--FSRWRSVSATNRIFSMDLREKSRSTLSESSKH 301
            CF ++   +NR   R +  IP FK+G   ++ RSV+  +RIFSMD REKSRS +  SS+H
Sbjct: 30   CFLEQSTKRNRNFFRSVSMIPPFKRGRFITKLRSVAGNSRIFSMDAREKSRSFVLVSSRH 89

Query: 302  KRVPVYVMMPIDSFCIDTFGVPRIRKIKALTISLKALKLAGVHGIAVEVWWGIVET-SPL 478
            KRVPV+VMMPID+F ID  G P+I+++KALT+SLKALKLAGVHGIAVEVWWGIVE  SPL
Sbjct: 90   KRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFSPL 149

Query: 479  VYNWSLYEEFFELISEVGLKLQVALSFHSNMHLSSPGHGVSLPQWIMEIGNLNKDIYYRD 658
             + WSLYEE F LISE GLKL VAL FHSNMHL     G+SLP WI EIG++NKDIYYRD
Sbjct: 150  EFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRD 209

Query: 659  RNGYTNDDYLTLGVDHNPLFCGRTGLQCYEDFLLNFADKFGSLMGTLIEEISVGLGPCGE 838
            ++G++N+DYLTLGVD  PLF GRT +QCYEDF+L+F+ KF   +G +IEEIS+GLGP GE
Sbjct: 210  KSGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYLGNVIEEISIGLGPSGE 269

Query: 839  LRYPAHPFGDGRWQFPGIGEFQCYDKYMMEDLKIASWEEGKPHWGNKGPQNAGNYNSIPF 1018
            LRYPAHP GDGRW+FPGIGEFQC+DKYMMEDL   + +EGKP WG++ P N G YNS P 
Sbjct: 270  LRYPAHPSGDGRWKFPGIGEFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPS 329

Query: 1019 GIPFFEEGQENFLSDY 1066
            G+PFFEEG ++FLSDY
Sbjct: 330  GVPFFEEGNDSFLSDY 345


>dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]
          Length = 498

 Score =  429 bits (1102), Expect = e-118
 Identities = 205/302 (67%), Positives = 245/302 (81%), Gaps = 3/302 (0%)
 Frame = +2

Query: 170  RHLLTIPLFKKG--FSRWRSVSATNRIFSMDLREKSRSTLSESSKHKRVPVYVMMPIDSF 343
            R +  IP FK+G   ++ RSV+  +RIFSMD REKSRS +  SS+HKRVPV+VMMPID+F
Sbjct: 11   RSVSMIPPFKRGRFITKLRSVAGNSRIFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTF 70

Query: 344  CIDTFGVPRIRKIKALTISLKALKLAGVHGIAVEVWWGIVET-SPLVYNWSLYEEFFELI 520
             ID  G P+I+++KALT+SLKALKLAGVHGIAVEVWWGIVE  SPL + WSLYEE F LI
Sbjct: 71   GIDASGCPKIKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLI 130

Query: 521  SEVGLKLQVALSFHSNMHLSSPGHGVSLPQWIMEIGNLNKDIYYRDRNGYTNDDYLTLGV 700
            SE GLKL VAL FHSNMHL     G+SLP WI EIG++NKDIYYRD++G++N+DYLTLGV
Sbjct: 131  SEAGLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTLGV 190

Query: 701  DHNPLFCGRTGLQCYEDFLLNFADKFGSLMGTLIEEISVGLGPCGELRYPAHPFGDGRWQ 880
            D  PLF GRT +QCYEDF+L+F+ KF   +G +IEEIS+GLGP GELRYPAHP GDGRW+
Sbjct: 191  DQLPLFGGRTAVQCYEDFMLSFSTKFEPYLGNVIEEISIGLGPSGELRYPAHPSGDGRWK 250

Query: 881  FPGIGEFQCYDKYMMEDLKIASWEEGKPHWGNKGPQNAGNYNSIPFGIPFFEEGQENFLS 1060
            FPGIGEFQC+DKYMMEDL   + +EGKP WG++ P N G YNS P G+PFFEEG ++FLS
Sbjct: 251  FPGIGEFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLS 310

Query: 1061 DY 1066
            DY
Sbjct: 311  DY 312


>gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana]
            gi|25054836|gb|AAN71908.1| putative beta-amylase
            [Arabidopsis thaliana]
          Length = 484

 Score =  428 bits (1100), Expect = e-117
 Identities = 204/297 (68%), Positives = 243/297 (81%), Gaps = 3/297 (1%)
 Frame = +2

Query: 185  IPLFKKG--FSRWRSVSATNRIFSMDLREKSRSTLSESSKHKRVPVYVMMPIDSFCIDTF 358
            IP FK+G   ++ RSV+  +RIFSMD REKSRS +  SS+HKRVPV+VMMPID+F ID  
Sbjct: 2    IPPFKRGRFITKLRSVAGNSRIFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTFGIDAS 61

Query: 359  GVPRIRKIKALTISLKALKLAGVHGIAVEVWWGIVET-SPLVYNWSLYEEFFELISEVGL 535
            G P+I+++KALT+SLKALKLAGVHGIAVEVWWGIVE  SPL + WSLYEE F LISE GL
Sbjct: 62   GCPKIKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGL 121

Query: 536  KLQVALSFHSNMHLSSPGHGVSLPQWIMEIGNLNKDIYYRDRNGYTNDDYLTLGVDHNPL 715
            KL VAL FHSNMHL     G+SLP WI EIG++NKDIYYRD++G++N+DYLTLGVD  PL
Sbjct: 122  KLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTLGVDQLPL 181

Query: 716  FCGRTGLQCYEDFLLNFADKFGSLMGTLIEEISVGLGPCGELRYPAHPFGDGRWQFPGIG 895
            F GRT +QCYEDF+L+F+ KF   +G +IEEIS+GLGP GELRYPAHP GDGRW+FPGIG
Sbjct: 182  FGGRTAVQCYEDFMLSFSTKFEPYLGNVIEEISIGLGPSGELRYPAHPSGDGRWKFPGIG 241

Query: 896  EFQCYDKYMMEDLKIASWEEGKPHWGNKGPQNAGNYNSIPFGIPFFEEGQENFLSDY 1066
            EFQC+DKYMMEDL   + +EGKP WG++ P N G YNS P G+PFFEEG ++FLSDY
Sbjct: 242  EFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSFLSDY 298


>ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. lyrata]
            gi|297310242|gb|EFH40666.1| beta-amylase 6 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 531

 Score =  428 bits (1100), Expect = e-117
 Identities = 207/316 (65%), Positives = 247/316 (78%), Gaps = 6/316 (1%)
 Frame = +2

Query: 137  CFEKRKIWKNR---RHLLTIPLFKKG--FSRWRSVSATNRIFSMDLREKSRSTLSESSKH 301
            CF ++   +NR   R +  IP  K+G   ++WRSV+  +RIFSMD REKSRS +  SS+H
Sbjct: 30   CFLEQSTKRNRNFFRSVSMIPPSKRGRFITKWRSVAGNSRIFSMDAREKSRSFVLVSSRH 89

Query: 302  KRVPVYVMMPIDSFCIDTFGVPRIRKIKALTISLKALKLAGVHGIAVEVWWGIVET-SPL 478
            KRVPV+VMMP D+F ID  G P+I+++KALT+SLKALKLAGVHGIAVEVWWGIVE   PL
Sbjct: 90   KRVPVFVMMPFDTFGIDASGCPKIKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFCPL 149

Query: 479  VYNWSLYEEFFELISEVGLKLQVALSFHSNMHLSSPGHGVSLPQWIMEIGNLNKDIYYRD 658
             + WSLYEE F LISE GLKL VAL FHSNMHL     G+SLP WI EIG++NKDIYYRD
Sbjct: 150  EFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRD 209

Query: 659  RNGYTNDDYLTLGVDHNPLFCGRTGLQCYEDFLLNFADKFGSLMGTLIEEISVGLGPCGE 838
            + G +N+DYLTLGVD  PLF GRT +QCYEDF+L+F+ KF    G +IEEIS+GLGP GE
Sbjct: 210  KRGLSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYFGNVIEEISIGLGPSGE 269

Query: 839  LRYPAHPFGDGRWQFPGIGEFQCYDKYMMEDLKIASWEEGKPHWGNKGPQNAGNYNSIPF 1018
            LRYPAHP GDGRW+FPGIGEFQC+DKYMMEDL   + +EGKP WG++ P N G YNS P 
Sbjct: 270  LRYPAHPSGDGRWKFPGIGEFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPS 329

Query: 1019 GIPFFEEGQENFLSDY 1066
            G+PFFEEG ++FLSDY
Sbjct: 330  GVPFFEEGNDSFLSDY 345


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