BLASTX nr result
ID: Panax21_contig00016848
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00016848 (534 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270678.1| PREDICTED: single-stranded DNA-binding prote... 126 2e-46 ref|XP_004137462.1| PREDICTED: single-stranded DNA-binding prote... 127 6e-45 ref|XP_002317924.1| predicted protein [Populus trichocarpa] gi|2... 128 1e-44 ref|XP_002511990.1| Single-stranded DNA-binding protein, mitocho... 129 2e-44 ref|XP_003609115.1| Single-stranded DNA-binding protein [Medicag... 125 1e-43 >ref|XP_002270678.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial [Vitis vinifera] gi|296088446|emb|CBI37437.3| unnamed protein product [Vitis vinifera] Length = 221 Score = 126 bits (316), Expect(2) = 2e-46 Identities = 54/71 (76%), Positives = 66/71 (92%) Frame = +3 Query: 321 LDNEEPRDYANRCSVQWHRVSIYPERLGEVAMKHVIPGSILYLEGNLETKVFSDPITGLV 500 LDNE+P++YANR +VQWHRV++YPE LG + MKHV PGS+LYLEGNLETK+F+DP+TGLV Sbjct: 125 LDNEDPKEYANRSAVQWHRVTVYPENLGNIVMKHVSPGSVLYLEGNLETKIFTDPVTGLV 184 Query: 501 RRIREIAIRRN 533 RRIRE+AIRRN Sbjct: 185 RRIREVAIRRN 195 Score = 84.7 bits (208), Expect(2) = 2e-46 Identities = 39/53 (73%), Positives = 46/53 (86%) Frame = +1 Query: 103 TQQRIYTDGPLENGFDVGIYKAVLVGQVGQTPIQKKLKSGRIVTLMSVGTGGI 261 TQ R+ D PLENG DVGIYKA+LVG+ GQTP+QK+L+SGR+VTL SVGTGGI Sbjct: 66 TQNRMVVDRPLENGLDVGIYKAILVGKAGQTPLQKRLRSGRMVTLFSVGTGGI 118 >ref|XP_004137462.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like [Cucumis sativus] gi|449486863|ref|XP_004157425.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like [Cucumis sativus] Length = 234 Score = 127 bits (318), Expect(2) = 6e-45 Identities = 57/71 (80%), Positives = 65/71 (91%) Frame = +3 Query: 321 LDNEEPRDYANRCSVQWHRVSIYPERLGEVAMKHVIPGSILYLEGNLETKVFSDPITGLV 500 L NEEPR+YANRC+VQWHRVSIYP RLG + MKHV+PGSILYLEGNLETK+F+D +TGLV Sbjct: 137 LANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLEGNLETKIFTDQVTGLV 196 Query: 501 RRIREIAIRRN 533 RRIRE+AIR N Sbjct: 197 RRIREVAIRGN 207 Score = 79.3 bits (194), Expect(2) = 6e-45 Identities = 38/53 (71%), Positives = 45/53 (84%) Frame = +1 Query: 103 TQQRIYTDGPLENGFDVGIYKAVLVGQVGQTPIQKKLKSGRIVTLMSVGTGGI 261 TQ R + PLENG D GIYKA+LVG+VGQ+P+QK+LKSGR VTL+SVGTGGI Sbjct: 78 TQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTVTLLSVGTGGI 130 >ref|XP_002317924.1| predicted protein [Populus trichocarpa] gi|222858597|gb|EEE96144.1| predicted protein [Populus trichocarpa] Length = 220 Score = 128 bits (321), Expect(2) = 1e-44 Identities = 57/71 (80%), Positives = 68/71 (95%) Frame = +3 Query: 321 LDNEEPRDYANRCSVQWHRVSIYPERLGEVAMKHVIPGSILYLEGNLETKVFSDPITGLV 500 L NE+PR+YANRC+VQWHRVS+YPERLG V M++V+PGSILY+EGNLETKVF+DPITGLV Sbjct: 124 LQNEDPREYANRCAVQWHRVSVYPERLGRVVMQNVLPGSILYVEGNLETKVFTDPITGLV 183 Query: 501 RRIREIAIRRN 533 RRIREIA+R+N Sbjct: 184 RRIREIAVRQN 194 Score = 77.0 bits (188), Expect(2) = 1e-44 Identities = 34/50 (68%), Positives = 42/50 (84%) Frame = +1 Query: 112 RIYTDGPLENGFDVGIYKAVLVGQVGQTPIQKKLKSGRIVTLMSVGTGGI 261 R+ D PLENG D G+YKA+LVGQVGQ P+QKKL+SGR +T+ S+GTGGI Sbjct: 68 RMVQDRPLENGLDAGVYKAILVGQVGQNPLQKKLRSGREITIFSMGTGGI 117 >ref|XP_002511990.1| Single-stranded DNA-binding protein, mitochondrial precursor, putative [Ricinus communis] gi|223549170|gb|EEF50659.1| Single-stranded DNA-binding protein, mitochondrial precursor, putative [Ricinus communis] Length = 223 Score = 129 bits (325), Expect(2) = 2e-44 Identities = 56/71 (78%), Positives = 68/71 (95%) Frame = +3 Query: 321 LDNEEPRDYANRCSVQWHRVSIYPERLGEVAMKHVIPGSILYLEGNLETKVFSDPITGLV 500 + NEEPR+YANRC+VQWHRVS+YPERLG + MKH++PGSI+YLEGNLETKVF+DPITGLV Sbjct: 127 MQNEEPREYANRCAVQWHRVSVYPERLGSIVMKHLLPGSIMYLEGNLETKVFTDPITGLV 186 Query: 501 RRIREIAIRRN 533 RRIRE+AIR++ Sbjct: 187 RRIREVAIRQD 197 Score = 75.1 bits (183), Expect(2) = 2e-44 Identities = 34/51 (66%), Positives = 43/51 (84%) Frame = +1 Query: 109 QRIYTDGPLENGFDVGIYKAVLVGQVGQTPIQKKLKSGRIVTLMSVGTGGI 261 QR PLENG D+G+YKA+LVGQVGQ+P+QKKL+SG+ VT+ S+GTGGI Sbjct: 70 QREVYQRPLENGLDLGVYKAILVGQVGQSPLQKKLRSGKSVTMFSLGTGGI 120 >ref|XP_003609115.1| Single-stranded DNA-binding protein [Medicago truncatula] gi|355510170|gb|AES91312.1| Single-stranded DNA-binding protein [Medicago truncatula] Length = 253 Score = 125 bits (313), Expect(2) = 1e-43 Identities = 54/71 (76%), Positives = 66/71 (92%) Frame = +3 Query: 321 LDNEEPRDYANRCSVQWHRVSIYPERLGEVAMKHVIPGSILYLEGNLETKVFSDPITGLV 500 LD+E PR+YANRC+VQWHRV++YPERLG + MK V+PGS LY+EGNLETKVFSDP+TGLV Sbjct: 142 LDHENPREYANRCAVQWHRVTVYPERLGNLLMKTVLPGSTLYVEGNLETKVFSDPVTGLV 201 Query: 501 RRIREIAIRRN 533 RR+RE+A+RRN Sbjct: 202 RRVREVAVRRN 212 Score = 76.6 bits (187), Expect(2) = 1e-43 Identities = 33/51 (64%), Positives = 43/51 (84%) Frame = +1 Query: 109 QRIYTDGPLENGFDVGIYKAVLVGQVGQTPIQKKLKSGRIVTLMSVGTGGI 261 +R + D PLENG D G+Y+A+LVG+ GQ P+QKKLKSG +VTL+S+GTGGI Sbjct: 85 ERTFFDRPLENGLDPGVYRAILVGKAGQKPLQKKLKSGTVVTLLSIGTGGI 135