BLASTX nr result

ID: Panax21_contig00016848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016848
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270678.1| PREDICTED: single-stranded DNA-binding prote...   126   2e-46
ref|XP_004137462.1| PREDICTED: single-stranded DNA-binding prote...   127   6e-45
ref|XP_002317924.1| predicted protein [Populus trichocarpa] gi|2...   128   1e-44
ref|XP_002511990.1| Single-stranded DNA-binding protein, mitocho...   129   2e-44
ref|XP_003609115.1| Single-stranded DNA-binding protein [Medicag...   125   1e-43

>ref|XP_002270678.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
           [Vitis vinifera] gi|296088446|emb|CBI37437.3| unnamed
           protein product [Vitis vinifera]
          Length = 221

 Score =  126 bits (316), Expect(2) = 2e-46
 Identities = 54/71 (76%), Positives = 66/71 (92%)
 Frame = +3

Query: 321 LDNEEPRDYANRCSVQWHRVSIYPERLGEVAMKHVIPGSILYLEGNLETKVFSDPITGLV 500
           LDNE+P++YANR +VQWHRV++YPE LG + MKHV PGS+LYLEGNLETK+F+DP+TGLV
Sbjct: 125 LDNEDPKEYANRSAVQWHRVTVYPENLGNIVMKHVSPGSVLYLEGNLETKIFTDPVTGLV 184

Query: 501 RRIREIAIRRN 533
           RRIRE+AIRRN
Sbjct: 185 RRIREVAIRRN 195



 Score = 84.7 bits (208), Expect(2) = 2e-46
 Identities = 39/53 (73%), Positives = 46/53 (86%)
 Frame = +1

Query: 103 TQQRIYTDGPLENGFDVGIYKAVLVGQVGQTPIQKKLKSGRIVTLMSVGTGGI 261
           TQ R+  D PLENG DVGIYKA+LVG+ GQTP+QK+L+SGR+VTL SVGTGGI
Sbjct: 66  TQNRMVVDRPLENGLDVGIYKAILVGKAGQTPLQKRLRSGRMVTLFSVGTGGI 118


>ref|XP_004137462.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
           [Cucumis sativus] gi|449486863|ref|XP_004157425.1|
           PREDICTED: single-stranded DNA-binding protein,
           mitochondrial-like [Cucumis sativus]
          Length = 234

 Score =  127 bits (318), Expect(2) = 6e-45
 Identities = 57/71 (80%), Positives = 65/71 (91%)
 Frame = +3

Query: 321 LDNEEPRDYANRCSVQWHRVSIYPERLGEVAMKHVIPGSILYLEGNLETKVFSDPITGLV 500
           L NEEPR+YANRC+VQWHRVSIYP RLG + MKHV+PGSILYLEGNLETK+F+D +TGLV
Sbjct: 137 LANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLEGNLETKIFTDQVTGLV 196

Query: 501 RRIREIAIRRN 533
           RRIRE+AIR N
Sbjct: 197 RRIREVAIRGN 207



 Score = 79.3 bits (194), Expect(2) = 6e-45
 Identities = 38/53 (71%), Positives = 45/53 (84%)
 Frame = +1

Query: 103 TQQRIYTDGPLENGFDVGIYKAVLVGQVGQTPIQKKLKSGRIVTLMSVGTGGI 261
           TQ R   + PLENG D GIYKA+LVG+VGQ+P+QK+LKSGR VTL+SVGTGGI
Sbjct: 78  TQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTVTLLSVGTGGI 130


>ref|XP_002317924.1| predicted protein [Populus trichocarpa] gi|222858597|gb|EEE96144.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  128 bits (321), Expect(2) = 1e-44
 Identities = 57/71 (80%), Positives = 68/71 (95%)
 Frame = +3

Query: 321 LDNEEPRDYANRCSVQWHRVSIYPERLGEVAMKHVIPGSILYLEGNLETKVFSDPITGLV 500
           L NE+PR+YANRC+VQWHRVS+YPERLG V M++V+PGSILY+EGNLETKVF+DPITGLV
Sbjct: 124 LQNEDPREYANRCAVQWHRVSVYPERLGRVVMQNVLPGSILYVEGNLETKVFTDPITGLV 183

Query: 501 RRIREIAIRRN 533
           RRIREIA+R+N
Sbjct: 184 RRIREIAVRQN 194



 Score = 77.0 bits (188), Expect(2) = 1e-44
 Identities = 34/50 (68%), Positives = 42/50 (84%)
 Frame = +1

Query: 112 RIYTDGPLENGFDVGIYKAVLVGQVGQTPIQKKLKSGRIVTLMSVGTGGI 261
           R+  D PLENG D G+YKA+LVGQVGQ P+QKKL+SGR +T+ S+GTGGI
Sbjct: 68  RMVQDRPLENGLDAGVYKAILVGQVGQNPLQKKLRSGREITIFSMGTGGI 117


>ref|XP_002511990.1| Single-stranded DNA-binding protein, mitochondrial precursor,
           putative [Ricinus communis] gi|223549170|gb|EEF50659.1|
           Single-stranded DNA-binding protein, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 223

 Score =  129 bits (325), Expect(2) = 2e-44
 Identities = 56/71 (78%), Positives = 68/71 (95%)
 Frame = +3

Query: 321 LDNEEPRDYANRCSVQWHRVSIYPERLGEVAMKHVIPGSILYLEGNLETKVFSDPITGLV 500
           + NEEPR+YANRC+VQWHRVS+YPERLG + MKH++PGSI+YLEGNLETKVF+DPITGLV
Sbjct: 127 MQNEEPREYANRCAVQWHRVSVYPERLGSIVMKHLLPGSIMYLEGNLETKVFTDPITGLV 186

Query: 501 RRIREIAIRRN 533
           RRIRE+AIR++
Sbjct: 187 RRIREVAIRQD 197



 Score = 75.1 bits (183), Expect(2) = 2e-44
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = +1

Query: 109 QRIYTDGPLENGFDVGIYKAVLVGQVGQTPIQKKLKSGRIVTLMSVGTGGI 261
           QR     PLENG D+G+YKA+LVGQVGQ+P+QKKL+SG+ VT+ S+GTGGI
Sbjct: 70  QREVYQRPLENGLDLGVYKAILVGQVGQSPLQKKLRSGKSVTMFSLGTGGI 120


>ref|XP_003609115.1| Single-stranded DNA-binding protein [Medicago truncatula]
           gi|355510170|gb|AES91312.1| Single-stranded DNA-binding
           protein [Medicago truncatula]
          Length = 253

 Score =  125 bits (313), Expect(2) = 1e-43
 Identities = 54/71 (76%), Positives = 66/71 (92%)
 Frame = +3

Query: 321 LDNEEPRDYANRCSVQWHRVSIYPERLGEVAMKHVIPGSILYLEGNLETKVFSDPITGLV 500
           LD+E PR+YANRC+VQWHRV++YPERLG + MK V+PGS LY+EGNLETKVFSDP+TGLV
Sbjct: 142 LDHENPREYANRCAVQWHRVTVYPERLGNLLMKTVLPGSTLYVEGNLETKVFSDPVTGLV 201

Query: 501 RRIREIAIRRN 533
           RR+RE+A+RRN
Sbjct: 202 RRVREVAVRRN 212



 Score = 76.6 bits (187), Expect(2) = 1e-43
 Identities = 33/51 (64%), Positives = 43/51 (84%)
 Frame = +1

Query: 109 QRIYTDGPLENGFDVGIYKAVLVGQVGQTPIQKKLKSGRIVTLMSVGTGGI 261
           +R + D PLENG D G+Y+A+LVG+ GQ P+QKKLKSG +VTL+S+GTGGI
Sbjct: 85  ERTFFDRPLENGLDPGVYRAILVGKAGQKPLQKKLKSGTVVTLLSIGTGGI 135


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