BLASTX nr result

ID: Panax21_contig00016817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016817
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196193.1| ethylene-dependent gravitropism-deficient and y...    69   4e-10
ref|XP_002873222.1| peptidase M50 family protein [Arabidopsis ly...    69   4e-10
ref|XP_002311209.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002271131.2| PREDICTED: uncharacterized protein LOC100267...    63   2e-08
ref|XP_003568414.1| PREDICTED: uncharacterized protein LOC100822...    60   1e-07

>ref|NP_196193.1| ethylene-dependent gravitropism-deficient and yellow-green-like 2
           protein [Arabidopsis thaliana]
           gi|9759099|dbj|BAB09668.1| unnamed protein product
           [Arabidopsis thaliana] gi|332003535|gb|AED90918.1|
           ethylene-dependent gravitropism-deficient and
           yellow-green-like 2 protein [Arabidopsis thaliana]
          Length = 556

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/47 (63%), Positives = 38/47 (80%)
 Frame = +3

Query: 249 CCKQPHQLNELITIPKETIDLLRDQVFGSDTFFVTGQEPYEANMIRK 389
           CC+QP QL++ + +PKETID+LR QVFG DTFFVT QEPYE  ++ K
Sbjct: 166 CCEQPLQLDDSMRLPKETIDILRGQVFGFDTFFVTSQEPYEGGVLFK 212


>ref|XP_002873222.1| peptidase M50 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319059|gb|EFH49481.1| peptidase M50 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 558

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/47 (63%), Positives = 38/47 (80%)
 Frame = +3

Query: 249 CCKQPHQLNELITIPKETIDLLRDQVFGSDTFFVTGQEPYEANMIRK 389
           CC+QP QL++ + +PKETID+LR QVFG DTFFVT QEPYE  ++ K
Sbjct: 168 CCEQPLQLDDSMRLPKETIDILRGQVFGFDTFFVTSQEPYEGGVLFK 214


>ref|XP_002311209.1| predicted protein [Populus trichocarpa] gi|222851029|gb|EEE88576.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/44 (70%), Positives = 36/44 (81%)
 Frame = +3

Query: 258 QPHQLNELITIPKETIDLLRDQVFGSDTFFVTGQEPYEANMIRK 389
           QP QL+E I IPKETID+LR+QVFG DTFFVT QEPYE  ++ K
Sbjct: 1   QPQQLDESIRIPKETIDILRNQVFGFDTFFVTSQEPYEGGVLFK 44


>ref|XP_002271131.2| PREDICTED: uncharacterized protein LOC100267324 [Vitis vinifera]
           gi|297736633|emb|CBI25504.3| unnamed protein product
           [Vitis vinifera]
          Length = 543

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +3

Query: 258 QPHQLNELITIPKETIDLLRDQVFGSDTFFVTGQEPYEANMIRK 389
           +P  L+E I IPKETID+L+DQVFG DTFFVT QEPYE  ++ K
Sbjct: 158 KPQVLDESIRIPKETIDILKDQVFGFDTFFVTNQEPYEGGVLFK 201


>ref|XP_003568414.1| PREDICTED: uncharacterized protein LOC100822953 [Brachypodium
           distachyon]
          Length = 569

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = +3

Query: 267 QLNELITIPKETIDLLRDQVFGSDTFFVTGQEPYEANMIRK 389
           QL+E +TIPK TID+L+DQVFG DTFFVT  EPYE  ++ K
Sbjct: 185 QLDESVTIPKATIDILKDQVFGFDTFFVTSHEPYEGGILFK 225


Top