BLASTX nr result

ID: Panax21_contig00016794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016794
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methy...   124   7e-27
ref|XP_004133887.1| PREDICTED: ribosomal RNA small subunit methy...   118   7e-25
ref|XP_002511789.1| dimethyladenosine transferase, putative [Ric...   117   2e-24
ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methy...   113   2e-23
ref|XP_003534590.1| PREDICTED: ribosomal RNA small subunit methy...   113   2e-23

>ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methyltransferase A [Vitis
           vinifera] gi|296089082|emb|CBI38785.3| unnamed protein
           product [Vitis vinifera]
          Length = 335

 Score =  124 bits (312), Expect = 7e-27
 Identities = 62/79 (78%), Positives = 72/79 (91%)
 Frame = -1

Query: 546 FRLKQVVDYPVVVSSTKSFFSMVNSAFNGKRKMLRKSLQHICSSSEIEEALRSIDLPPTS 367
           F+LKQ VDYP V SS KSFFS+VNSAFNGKRKMLR+SLQHIC+S EIEEALR++ LP TS
Sbjct: 257 FKLKQAVDYPPV-SSIKSFFSLVNSAFNGKRKMLRRSLQHICTSIEIEEALRNVGLPATS 315

Query: 366 RPEELTIEDFVRLHSMIVK 310
           RPEELT++DFVRLH++IVK
Sbjct: 316 RPEELTLDDFVRLHNLIVK 334


>ref|XP_004133887.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
           [Cucumis sativus]
          Length = 347

 Score =  118 bits (295), Expect = 7e-25
 Identities = 59/79 (74%), Positives = 69/79 (87%)
 Frame = -1

Query: 546 FRLKQVVDYPVVVSSTKSFFSMVNSAFNGKRKMLRKSLQHICSSSEIEEALRSIDLPPTS 367
           F+LK+  DYP V SSTKSFFSMVNSAFNGKRKMLRKSLQHIC+S EIE+AL    L PTS
Sbjct: 269 FKLKRAADYPAV-SSTKSFFSMVNSAFNGKRKMLRKSLQHICTSLEIEKALEDSSLLPTS 327

Query: 366 RPEELTIEDFVRLHSMIVK 310
           RPEEL+++DFV+LH++IVK
Sbjct: 328 RPEELSLDDFVKLHNLIVK 346


>ref|XP_002511789.1| dimethyladenosine transferase, putative [Ricinus communis]
           gi|223548969|gb|EEF50458.1| dimethyladenosine
           transferase, putative [Ricinus communis]
          Length = 338

 Score =  117 bits (292), Expect = 2e-24
 Identities = 56/79 (70%), Positives = 70/79 (88%)
 Frame = -1

Query: 546 FRLKQVVDYPVVVSSTKSFFSMVNSAFNGKRKMLRKSLQHICSSSEIEEALRSIDLPPTS 367
           F+LKQ  DYP V SS+KSFFS+VNSAFNGKRKMLR+SLQHIC+S EIE+AL ++ LP TS
Sbjct: 260 FKLKQTADYPAV-SSSKSFFSLVNSAFNGKRKMLRRSLQHICTSPEIEQALINVGLPATS 318

Query: 366 RPEELTIEDFVRLHSMIVK 310
           RPEELT++DFV+LH++I +
Sbjct: 319 RPEELTLDDFVKLHNLIAR 337


>ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
           [Glycine max]
          Length = 341

 Score =  113 bits (283), Expect = 2e-23
 Identities = 60/80 (75%), Positives = 68/80 (85%)
 Frame = -1

Query: 546 FRLKQVVDYPVVVSSTKSFFSMVNSAFNGKRKMLRKSLQHICSSSEIEEALRSIDLPPTS 367
           F+LK   +YP V SSTKSFFSMVNSAFN KRKMLRKSLQHIC+S EIEEAL SI L  TS
Sbjct: 263 FKLKLPSEYPQV-SSTKSFFSMVNSAFNEKRKMLRKSLQHICTSLEIEEALTSIGLLATS 321

Query: 366 RPEELTIEDFVRLHSMIVKE 307
           RPEELT++DFV+LH++I KE
Sbjct: 322 RPEELTLDDFVKLHNLIAKE 341


>ref|XP_003534590.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
           [Glycine max]
          Length = 341

 Score =  113 bits (283), Expect = 2e-23
 Identities = 60/80 (75%), Positives = 68/80 (85%)
 Frame = -1

Query: 546 FRLKQVVDYPVVVSSTKSFFSMVNSAFNGKRKMLRKSLQHICSSSEIEEALRSIDLPPTS 367
           F+LK   +YP V SSTKSFFSMVNSAFN KRKMLRKSLQHIC+S EIEEAL SI L  TS
Sbjct: 263 FKLKLPSEYPQV-SSTKSFFSMVNSAFNEKRKMLRKSLQHICTSLEIEEALTSIGLLATS 321

Query: 366 RPEELTIEDFVRLHSMIVKE 307
           RPEELT++DFV+LH++I KE
Sbjct: 322 RPEELTLDDFVKLHNLIAKE 341


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