BLASTX nr result

ID: Panax21_contig00016778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016778
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]   137   7e-31
ref|XP_002325124.1| f-box family protein [Populus trichocarpa] g...   137   1e-30
gb|AFK37093.1| unknown [Medicago truncatula]                          133   1e-29
gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK...   133   1e-29
ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula] gi...   133   1e-29

>ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]
          Length = 308

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/78 (80%), Positives = 71/78 (91%)
 Frame = -1

Query: 368 KLSARGLFLISEGCLNLESLDLSGCANVTSRDIANASSQLKNLKDIKKPNFYIPRSVFHT 189
           K+SA+GL LI +GCLNLE LDLSGCAN+TSRDIANA+S LKNLK I+KPNFYIPRSVFH 
Sbjct: 229 KISAKGLALICDGCLNLEYLDLSGCANLTSRDIANATSNLKNLKKIEKPNFYIPRSVFHA 288

Query: 188 DRYGHWRLYDERFQTDVF 135
           +RYGHWRLYD+RFQTD F
Sbjct: 289 ERYGHWRLYDDRFQTDTF 306


>ref|XP_002325124.1| f-box family protein [Populus trichocarpa]
           gi|222866558|gb|EEF03689.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/78 (80%), Positives = 70/78 (89%)
 Frame = -1

Query: 368 KLSARGLFLISEGCLNLESLDLSGCANVTSRDIANASSQLKNLKDIKKPNFYIPRSVFHT 189
           K+SA+GL  I EGCLNLE LDLSGCAN+TSRDI  A+  LKNLK+IKKPNFYIPRSVFHT
Sbjct: 235 KMSAKGLVSICEGCLNLEYLDLSGCANLTSRDIVKATLGLKNLKEIKKPNFYIPRSVFHT 294

Query: 188 DRYGHWRLYDERFQTDVF 135
           +RYGHWRLYDERFQTD+F
Sbjct: 295 ERYGHWRLYDERFQTDIF 312


>gb|AFK37093.1| unknown [Medicago truncatula]
          Length = 174

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/78 (80%), Positives = 69/78 (88%)
 Frame = -1

Query: 368 KLSARGLFLISEGCLNLESLDLSGCANVTSRDIANASSQLKNLKDIKKPNFYIPRSVFHT 189
           KL+A+GL  I +GC NLE LDLSGCAN+TSRDIA ASS L +LKDIKKPNFYIPRSVFHT
Sbjct: 95  KLTAKGLNSICQGCPNLEFLDLSGCANLTSRDIAKASSSLSHLKDIKKPNFYIPRSVFHT 154

Query: 188 DRYGHWRLYDERFQTDVF 135
           +RYGHW LYDERFQTDVF
Sbjct: 155 ERYGHWSLYDERFQTDVF 172


>gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK45992.1| unknown
           [Medicago truncatula]
          Length = 302

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/78 (80%), Positives = 69/78 (88%)
 Frame = -1

Query: 368 KLSARGLFLISEGCLNLESLDLSGCANVTSRDIANASSQLKNLKDIKKPNFYIPRSVFHT 189
           KL+A+GL  I +GC NLE LDLSGCAN+TSRDIA ASS L +LKDIKKPNFYIPRSVFHT
Sbjct: 223 KLTAKGLNSICQGCPNLEFLDLSGCANLTSRDIAKASSSLSHLKDIKKPNFYIPRSVFHT 282

Query: 188 DRYGHWRLYDERFQTDVF 135
           +RYGHW LYDERFQTDVF
Sbjct: 283 ERYGHWSLYDERFQTDVF 300


>ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula]
           gi|355511349|gb|AES92491.1| F-box protein SKIP1
           [Medicago truncatula]
          Length = 302

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/78 (80%), Positives = 69/78 (88%)
 Frame = -1

Query: 368 KLSARGLFLISEGCLNLESLDLSGCANVTSRDIANASSQLKNLKDIKKPNFYIPRSVFHT 189
           KL+A+GL  I +GC NLE LDLSGCAN+TSRDIA ASS L +LKDIKKPNFYIPRSVFHT
Sbjct: 223 KLTAKGLNSICQGCPNLEFLDLSGCANLTSRDIAKASSSLSHLKDIKKPNFYIPRSVFHT 282

Query: 188 DRYGHWRLYDERFQTDVF 135
           +RYGHW LYDERFQTDVF
Sbjct: 283 ERYGHWSLYDERFQTDVF 300


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