BLASTX nr result

ID: Panax21_contig00016762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016762
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinif...    65   7e-09
emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]    65   7e-09
ref|XP_003554063.1| PREDICTED: F-box protein SKIP24-like [Glycin...    63   2e-08
ref|XP_002319735.1| f-box family protein [Populus trichocarpa] g...    62   6e-08
ref|XP_002530951.1| conserved hypothetical protein [Ricinus comm...    61   1e-07

>ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinifera]
           gi|296085868|emb|CBI31192.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 33/63 (52%), Positives = 45/63 (71%)
 Frame = -3

Query: 191 LMKLNRFERDRARKLLAHRRAVLRIESRIAEHSRRILEIKHIFAADSEKMKSTILELSNL 12
           LM   +F+R+RARK  AHRRAVLR+ES+IA H R + EI+     ++EKMK+ + EL NL
Sbjct: 76  LMYRIKFDRERARKAAAHRRAVLRLESQIAGHLRNLQEIQMKLTEETEKMKAAVTELPNL 135

Query: 11  QNV 3
           + V
Sbjct: 136 RKV 138


>emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]
          Length = 256

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 33/63 (52%), Positives = 45/63 (71%)
 Frame = -3

Query: 191 LMKLNRFERDRARKLLAHRRAVLRIESRIAEHSRRILEIKHIFAADSEKMKSTILELSNL 12
           LM   +F+R+RARK  AHRRAVLR+ES+IA H R + EI+     ++EKMK+ + EL NL
Sbjct: 76  LMYRIKFDRERARKAAAHRRAVLRLESQIAGHLRNLQEIQMKLTEETEKMKAAVTELPNL 135

Query: 11  QNV 3
           + V
Sbjct: 136 RKV 138


>ref|XP_003554063.1| PREDICTED: F-box protein SKIP24-like [Glycine max]
          Length = 267

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/64 (51%), Positives = 47/64 (73%)
 Frame = -3

Query: 194 SLMKLNRFERDRARKLLAHRRAVLRIESRIAEHSRRILEIKHIFAADSEKMKSTILELSN 15
           SL +L RFERD+ R++ AHRRAVLR ES++AEHSRR+ ++K   A ++ K   T  +LSN
Sbjct: 75  SLYRL-RFERDKERRIAAHRRAVLRKESQVAEHSRRLKDMKTRLAQETTKATQTAQDLSN 133

Query: 14  LQNV 3
           L+ +
Sbjct: 134 LRRL 137


>ref|XP_002319735.1| f-box family protein [Populus trichocarpa]
           gi|222858111|gb|EEE95658.1| f-box family protein
           [Populus trichocarpa]
          Length = 273

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 30/58 (51%), Positives = 43/58 (74%)
 Frame = -3

Query: 176 RFERDRARKLLAHRRAVLRIESRIAEHSRRILEIKHIFAADSEKMKSTILELSNLQNV 3
           +FER+++RK+ AHRRAVLR ES + E  R+I EI++    ++EKM++T  ELSNL  V
Sbjct: 80  KFEREKSRKVAAHRRAVLRKESEVLEFERKIREIENGLRQETEKMRATAAELSNLHKV 137


>ref|XP_002530951.1| conserved hypothetical protein [Ricinus communis]
           gi|223529466|gb|EEF31423.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/58 (51%), Positives = 41/58 (70%)
 Frame = -3

Query: 176 RFERDRARKLLAHRRAVLRIESRIAEHSRRILEIKHIFAADSEKMKSTILELSNLQNV 3
           RFE++R +K+ AHRRAVLR ES I E  R+I +I++    +S+KM+ T  ELSNL  V
Sbjct: 84  RFEKEREKKVAAHRRAVLRKESEIMERERKIRDIEYRLCQESDKMRDTANELSNLHKV 141


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