BLASTX nr result

ID: Panax21_contig00016751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016751
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33619.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002281005.1| PREDICTED: lisH domain and HEAT repeat-conta...   170   1e-40
ref|XP_004138804.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain ...   161   4e-38
ref|XP_004158535.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain ...   161   6e-38
ref|XP_002528079.1| conserved hypothetical protein [Ricinus comm...   145   3e-33

>emb|CBI33619.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  170 bits (431), Expect = 1e-40
 Identities = 77/107 (71%), Positives = 94/107 (87%)
 Frame = +3

Query: 165 NYIVSSAQPCPPLSGVEGSLESHLHVLGERER*NVNVLFRLLTELLPYLHKKAVETCSFP 344
           ++I+ S+Q CPPLSGVEGS+ESHLHVLGERER NV+VL R+LTELLP++H+KA+ETC FP
Sbjct: 665 SHILGSSQRCPPLSGVEGSVESHLHVLGERERWNVDVLLRMLTELLPFVHQKAIETCPFP 724

Query: 345 SASDAEGELFSTSLLELYTGGCVEWPTFEWLHCDCFPTLIQLASLLP 485
           + S++ G LFSTSLLELY GG +EWP FEW+H DCFP+LIQLA LLP
Sbjct: 725 TVSESMGTLFSTSLLELYAGGHIEWPAFEWMHIDCFPSLIQLACLLP 771


>ref|XP_002281005.1| PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468
           homolog [Vitis vinifera]
          Length = 1184

 Score =  170 bits (431), Expect = 1e-40
 Identities = 77/107 (71%), Positives = 94/107 (87%)
 Frame = +3

Query: 165 NYIVSSAQPCPPLSGVEGSLESHLHVLGERER*NVNVLFRLLTELLPYLHKKAVETCSFP 344
           ++I+ S+Q CPPLSGVEGS+ESHLHVLGERER NV+VL R+LTELLP++H+KA+ETC FP
Sbjct: 665 SHILGSSQRCPPLSGVEGSVESHLHVLGERERWNVDVLLRMLTELLPFVHQKAIETCPFP 724

Query: 345 SASDAEGELFSTSLLELYTGGCVEWPTFEWLHCDCFPTLIQLASLLP 485
           + S++ G LFSTSLLELY GG +EWP FEW+H DCFP+LIQLA LLP
Sbjct: 725 TVSESMGTLFSTSLLELYAGGHIEWPAFEWMHIDCFPSLIQLACLLP 771


>ref|XP_004138804.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain and HEAT
           repeat-containing protein KIAA1468 homolog [Cucumis
           sativus]
          Length = 1249

 Score =  161 bits (408), Expect = 4e-38
 Identities = 72/107 (67%), Positives = 89/107 (83%)
 Frame = +3

Query: 165 NYIVSSAQPCPPLSGVEGSLESHLHVLGERER*NVNVLFRLLTELLPYLHKKAVETCSFP 344
           ++I+SSAQ CPPLSGVEGS+ESHL  LGERER NV+VL ++L+ELLP++H+KA+ETC F 
Sbjct: 677 SHILSSAQRCPPLSGVEGSVESHLRALGERERWNVDVLLKMLSELLPFVHQKAIETCPFS 736

Query: 345 SASDAEGELFSTSLLELYTGGCVEWPTFEWLHCDCFPTLIQLASLLP 485
           S + A G + STS+LELY GGC+EWP FEW+H DCFP LIQLA  LP
Sbjct: 737 SVTQATGTMISTSVLELYAGGCIEWPAFEWIHVDCFPDLIQLACFLP 783


>ref|XP_004158535.1| PREDICTED: LOW QUALITY PROTEIN: lisH domain and HEAT
           repeat-containing protein KIAA1468 homolog [Cucumis
           sativus]
          Length = 1190

 Score =  161 bits (407), Expect = 6e-38
 Identities = 72/107 (67%), Positives = 89/107 (83%)
 Frame = +3

Query: 165 NYIVSSAQPCPPLSGVEGSLESHLHVLGERER*NVNVLFRLLTELLPYLHKKAVETCSFP 344
           ++I+SSAQ CPPLSGVEGS+ESHL  LGERER NV+VL ++L+ELLP++H+KA+ETC F 
Sbjct: 669 SHILSSAQRCPPLSGVEGSVESHLRALGERERWNVDVLLKMLSELLPFVHQKAIETCPFS 728

Query: 345 SASDAEGELFSTSLLELYTGGCVEWPTFEWLHCDCFPTLIQLASLLP 485
           S + A G + STS+LELY GGC+EWP FEW+H DCFP LIQLA  LP
Sbjct: 729 SVTQATGTMISTSVLELYAGGCIEWPAFEWIHVDCFPDLIQLACXLP 775


>ref|XP_002528079.1| conserved hypothetical protein [Ricinus communis]
           gi|223532540|gb|EEF34329.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1167

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/107 (63%), Positives = 85/107 (79%)
 Frame = +3

Query: 165 NYIVSSAQPCPPLSGVEGSLESHLHVLGERER*NVNVLFRLLTELLPYLHKKAVETCSFP 344
           ++++SSAQ  PPLSGVEGS+ESHL VLGERER N++VL ++L ELLP++H+KAVETC F 
Sbjct: 648 SHLLSSAQRSPPLSGVEGSVESHLRVLGERERWNIDVLLKMLVELLPFVHQKAVETCPFS 707

Query: 345 SASDAEGELFSTSLLELYTGGCVEWPTFEWLHCDCFPTLIQLASLLP 485
           S  ++    FST LLELY+ G VEW  FEW+H DCFP LIQLA +LP
Sbjct: 708 SVPESPATFFSTFLLELYSKGQVEWSAFEWMHVDCFPDLIQLACMLP 754


Top