BLASTX nr result

ID: Panax21_contig00016743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016743
         (1631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|2...   452   e-149
ref|XP_003544990.1| PREDICTED: nucleolar complex protein 4 homol...   441   e-142
ref|XP_003519333.1| PREDICTED: nucleolar complex protein 4 homol...   428   e-135
ref|XP_002531130.1| nucleolar complex protein, putative [Ricinus...   474   e-131
ref|XP_002884044.1| hypothetical protein ARALYDRAFT_480608 [Arab...   408   e-131

>ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|222849985|gb|EEE87532.1|
            predicted protein [Populus trichocarpa]
          Length = 575

 Score =  452 bits (1163), Expect(2) = e-149
 Identities = 221/308 (71%), Positives = 260/308 (84%)
 Frame = +2

Query: 422  NVAKKMKLKFTKAWISFLSLPLPLDVYKEVLVTLHQAVIPHLSNPIMLCDFLTRSYDIGG 601
            N AKKMKLKFTKAWISFL LPLP+DVYKEVL  LHQAVIPHLSNPIMLCDFLTRSYDIGG
Sbjct: 269  NYAKKMKLKFTKAWISFLRLPLPIDVYKEVLSNLHQAVIPHLSNPIMLCDFLTRSYDIGG 328

Query: 602  VISVMALSSLYVLMTQHGLEYPNFYEKLYVLLEPSIFMAKHRSKFFQLLDSCXXXXXXXX 781
            V+SVMALSSL++LMT+HGLEYPNFYEKLYVLL PSIFMAKHR+KFFQLLDSC        
Sbjct: 329  VVSVMALSSLFILMTKHGLEYPNFYEKLYVLLLPSIFMAKHRAKFFQLLDSCLKSPLLPA 388

Query: 782  XXXXXXXXXXXRLVLSVPPSGSLIIIALIHNLLRRHPSINCLVHREDGNGTAEDDLRAEK 961
                       RL L VPPSG+L+IIALIHNLLRRHPSINCLVH+ED N T +++  AE 
Sbjct: 389  YLAAAFAKKLSRLALVVPPSGALVIIALIHNLLRRHPSINCLVHQEDCNDTTDNNSEAEG 448

Query: 962  VDDHVEDSSTSIDMSSKKPGIDHFNNEENDPVKTNAMRSSLWEIDTLRHHYCPPISRFVL 1141
              D+  +   S +++++K GIDHF+NEE++P+K++A+ SSLWEID+LRHHYCPP+SRFV 
Sbjct: 449  -GDNENEFGASTNIAARKAGIDHFDNEESNPLKSHALGSSLWEIDSLRHHYCPPVSRFVQ 507

Query: 1142 SLENDLTIRAKTIELAIKDFSSGSYATIFGEEIRRRVKQVPLAFYQATPTSLFSESDFPG 1321
            SLENDLT+RAKT E+ ++DFSSGSYATIFGEEIRRRVKQVP+AFY+A PTSLFSE+DF G
Sbjct: 508  SLENDLTVRAKTTEVNVEDFSSGSYATIFGEEIRRRVKQVPVAFYKAIPTSLFSETDFSG 567

Query: 1322 WTFKMKDD 1345
            W+FK +++
Sbjct: 568  WSFKEEEE 575



 Score =  103 bits (256), Expect(2) = e-149
 Identities = 56/129 (43%), Positives = 84/129 (65%), Gaps = 5/129 (3%)
 Frame = +3

Query: 6   IVESTSGVDTLSDFLESKYFKYIDVRFFTYISLEKLIRNLEMKNISDDKNVTDNG----- 170
           IV+ST  +D + + L SKYFKYID+R+FTYI++EK  +NLE+K+ISD K  T++G     
Sbjct: 146 IVQSTESLDFVLELLASKYFKYIDIRYFTYINIEKFAKNLELKDISDGK--TESGDKVGE 203

Query: 171 SHPRISTELSVHNIHHLLSHIPTLEALDEKSEYEMWNGSGIFIKEGNHKKHAEVLKAEGK 350
           S  R S ELS++ IH+++S+IP LE   + S+YE+W GSG           ++ LK E K
Sbjct: 204 SDSRESLELSIYKIHYIISNIPPLEDPKQNSDYELWGGSG----------PSQHLKTEDK 253

Query: 351 KRKTKNNSD 377
             K++ + +
Sbjct: 254 DLKSEKHDN 262


>ref|XP_003544990.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]
          Length = 600

 Score =  441 bits (1135), Expect(2) = e-142
 Identities = 217/322 (67%), Positives = 257/322 (79%), Gaps = 2/322 (0%)
 Frame = +2

Query: 425  VAKKMKLKFTKAWISFLSLPLPLDVYKEVLVTLHQAVIPHLSNPIMLCDFLTRSYDIGGV 604
            +AKKMKLKFTKAWI++L LPLP+DVYKEVLV LHQAVIPHLSNPIMLCDFLTRSYD+GGV
Sbjct: 279  IAKKMKLKFTKAWIAYLRLPLPIDVYKEVLVNLHQAVIPHLSNPIMLCDFLTRSYDVGGV 338

Query: 605  ISVMALSSLYVLMTQHGLEYPNFYEKLYVLLEPSIFMAKHRSKFFQLLDSCXXXXXXXXX 784
            +SVMALSSL+VLMTQ+GLEYPNFYEKLY LL PSIFMAKHR++FFQLLDSC         
Sbjct: 339  VSVMALSSLFVLMTQYGLEYPNFYEKLYALLVPSIFMAKHRARFFQLLDSCLKSPLLPAY 398

Query: 785  XXXXXXXXXXRLVLSVPPSGSLIIIALIHNLLRRHPSINCLVHREDGNGTAEDDLRAEKV 964
                      RL+LSVPPSG+L+I ALIHN+LRRHPSINCLVHREDG    + D R ++ 
Sbjct: 399  LAASFAKKLSRLLLSVPPSGALVITALIHNILRRHPSINCLVHREDGVDEGKGDHRTDEG 458

Query: 965  DDHVEDSSTSIDMSSKKPGIDHFNNEENDPVKTNAMRSSLWEIDTLRHHYCPPISRFVLS 1144
                 D++ ++ M S+K GIDHFN+ E DP K+ AMRSSLWEIDT+ HHYCPP SRF LS
Sbjct: 459  MATNSDNAKTVAMPSQKSGIDHFNSSETDPKKSGAMRSSLWEIDTILHHYCPPASRFALS 518

Query: 1145 LENDLTIRAKTIELAIKDFSSGSYATIFGEEIRRRVKQVPLAFYQATPTSLFSESDFPGW 1324
            L NDLT+RAKT E+ + DFS+GSYATI G EI RRVKQVPLAF++ATP+SLFSE+DF GW
Sbjct: 519  LGNDLTVRAKTTEVNVGDFSAGSYATILGAEISRRVKQVPLAFFKATPSSLFSETDFAGW 578

Query: 1325 TFKMKD--DTLNDDDKKVNNIS 1384
            TFK ++    +ND++    ++S
Sbjct: 579  TFKCEETPKMINDNNDSTKDLS 600



 Score = 91.3 bits (225), Expect(2) = e-142
 Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
 Frame = +3

Query: 3   TIVESTSGVDTLSDFLESKYFKYIDVRFFTYISLEKLIRNLEMKNISDDKNV-TDNGSHP 179
           +IV STS    L D L SKYFKYIDVR+FT+ISL+KL   LE K++SDDK    D  S  
Sbjct: 149 SIVYSTSPPTFLVDLLASKYFKYIDVRYFTFISLKKLASTLEGKDVSDDKIANADGSSES 208

Query: 180 RIST--ELSVHNIHHLLSHIPTLEALDEKSEYEMWNGSGIFIKEGNHKKHAEVLKAEGKK 353
           ++S+  E  +HN+++ +SH+P  +  D  SE EMW+ S     E +HK+      A+ K 
Sbjct: 209 QMSSNMECVIHNMYYTISHVPPHQGSDNTSELEMWSSS-----ESDHKQLYGDKGADDKP 263

Query: 354 RK 359
           +K
Sbjct: 264 QK 265


>ref|XP_003519333.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]
          Length = 581

 Score =  428 bits (1100), Expect(2) = e-135
 Identities = 214/315 (67%), Positives = 252/315 (80%)
 Frame = +2

Query: 425  VAKKMKLKFTKAWISFLSLPLPLDVYKEVLVTLHQAVIPHLSNPIMLCDFLTRSYDIGGV 604
            +AKKMKLKFTKAWI++L LPLP DVYKEVLV LHQAVIPHLSNPI+LCDFLTRSYD+GGV
Sbjct: 270  IAKKMKLKFTKAWIAYLRLPLPHDVYKEVLVCLHQAVIPHLSNPIILCDFLTRSYDVGGV 329

Query: 605  ISVMALSSLYVLMTQHGLEYPNFYEKLYVLLEPSIFMAKHRSKFFQLLDSCXXXXXXXXX 784
            +SVMALSSL+VLMTQ+GLEYPNFY+KLY LL PSIFMAKHR++FFQLLDSC         
Sbjct: 330  VSVMALSSLFVLMTQYGLEYPNFYDKLYALLVPSIFMAKHRARFFQLLDSCLKSPLLPAY 389

Query: 785  XXXXXXXXXXRLVLSVPPSGSLIIIALIHNLLRRHPSINCLVHREDGNGTAEDDLRAEKV 964
                      RL+LSVPPSG+L+I ALIHNLLRRHPSINCLVHREDG    + D   E +
Sbjct: 390  LAASFAKKLSRLLLSVPPSGALVITALIHNLLRRHPSINCLVHREDGVDEGKGD---EGM 446

Query: 965  DDHVEDSSTSIDMSSKKPGIDHFNNEENDPVKTNAMRSSLWEIDTLRHHYCPPISRFVLS 1144
              + +++ T+  M S+K GIDHFN+ E DP K+ AMRSSLWEIDT+ HHYCPP SRF LS
Sbjct: 447  ATNSDNAKTA--MPSQKSGIDHFNSSETDPKKSGAMRSSLWEIDTILHHYCPPASRFALS 504

Query: 1145 LENDLTIRAKTIELAIKDFSSGSYATIFGEEIRRRVKQVPLAFYQATPTSLFSESDFPGW 1324
            L NDLT+RAKT E+ + DFS+GSYATI G EI RRVKQVPLAF++ATP+SLFSE+DF GW
Sbjct: 505  LGNDLTVRAKTTEVNVGDFSAGSYATILGAEISRRVKQVPLAFFKATPSSLFSETDFAGW 564

Query: 1325 TFKMKDDTLNDDDKK 1369
            TFK ++     +D++
Sbjct: 565  TFKCEETPKMINDRE 579



 Score = 82.4 bits (202), Expect(2) = e-135
 Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
 Frame = +3

Query: 3   TIVESTSGVDTLSDFLESKYFKYIDVRFFTYISLEKLIRNLEMKNISDDKNVTDNGSHPR 182
           +IV S+S    L D L +KYFKYIDVR+FT+ISL+KL   LE K++S      D  S  +
Sbjct: 144 SIVYSSSPPTFLVDLLATKYFKYIDVRYFTFISLKKLASTLEGKDVS---GAADGTSESQ 200

Query: 183 IST--ELSVHNIHHLLSHIPTLEALDEKSEYEMWNGSGIFIKEGNHKKHAEVLKAEGKKR 356
           +S+  E  +HN+++ +SH+P  +  D  S+ EMW+ S     E +HK+ +    A+ K +
Sbjct: 201 LSSNMECVIHNMYYTISHVPPHKGSDNTSDLEMWSSS-----ESDHKQLSGDKGADDKPQ 255

Query: 357 KTK 365
           K++
Sbjct: 256 KSQ 258


>ref|XP_002531130.1| nucleolar complex protein, putative [Ricinus communis]
            gi|223529279|gb|EEF31250.1| nucleolar complex protein,
            putative [Ricinus communis]
          Length = 652

 Score =  474 bits (1220), Expect = e-131
 Identities = 234/338 (69%), Positives = 272/338 (80%), Gaps = 1/338 (0%)
 Frame = +2

Query: 422  NVAKKMKLKFTKAWISFLSLPLPLDVYKEVLVTLHQAVIPHLSNPIMLCDFLTRSYDIGG 601
            +++KKMKLKFTKAWISFL LPLP++VYKEVL++LHQAVIP++SNP+MLCDFLTRSYDIGG
Sbjct: 315  SISKKMKLKFTKAWISFLRLPLPVNVYKEVLISLHQAVIPYISNPLMLCDFLTRSYDIGG 374

Query: 602  VISVMALSSLYVLMTQHGLEYPNFYEKLYVLLEPSIFMAKHRSKFFQLLDSCXXXXXXXX 781
            V+SVMALSSL++LMTQHGLEYPNFYEKLY LL PS+FMAKHRSKFFQLLDSC        
Sbjct: 375  VVSVMALSSLFILMTQHGLEYPNFYEKLYALLLPSVFMAKHRSKFFQLLDSCLKSPLLPA 434

Query: 782  XXXXXXXXXXXRLVLSVPPSGSLIIIALIHNLLRRHPSINCLVHREDGNGTAEDDLRAEK 961
                       RL L+ PPSG ++IIALIHNLLRRHPSINCLVHREDGN +A D+ +A+ 
Sbjct: 435  YLAAAFAKRLSRLALTAPPSGGVVIIALIHNLLRRHPSINCLVHREDGNESAADNSKAKG 494

Query: 962  VD-DHVEDSSTSIDMSSKKPGIDHFNNEENDPVKTNAMRSSLWEIDTLRHHYCPPISRFV 1138
             D     +S      S++KPGID FNNEE  P+K++A+RSSLWEIDTL HHYCPP+SRFV
Sbjct: 495  EDAGDANNSRNGSHASARKPGIDRFNNEECSPIKSSALRSSLWEIDTLSHHYCPPVSRFV 554

Query: 1139 LSLENDLTIRAKTIELAIKDFSSGSYATIFGEEIRRRVKQVPLAFYQATPTSLFSESDFP 1318
            LSLENDLT+R KT E+ I DFSS SYATIF EE+RRRVKQVPLAF++ATPTSLFSESDF 
Sbjct: 555  LSLENDLTVRKKTTEVNINDFSSSSYATIFEEELRRRVKQVPLAFFKATPTSLFSESDFA 614

Query: 1319 GWTFKMKDDTLNDDDKKVNNISEEHDQKSTKRQRIECS 1432
            GWTFK +    ND     ++ SEE+D   TKRQRIECS
Sbjct: 615  GWTFKYEQSKRNDAVNGTSDKSEENDCSPTKRQRIECS 652



 Score = 91.3 bits (225), Expect = 7e-16
 Identities = 45/101 (44%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
 Frame = +3

Query: 6   IVESTSGVDTLSDFLESKYFKYIDVRFFTYISLEKLIRNLEMKNISDDKNVT----DNGS 173
           +V+S + VD + + L SKYF YID+ +FTYISL+KL + +   +  D+K  +    D+ S
Sbjct: 193 LVQSATPVDFVLELLASKYFNYIDICYFTYISLDKLAKTMGENDSPDNKAKSAANGDDAS 252

Query: 174 HPRISTELSVHNIHHLLSHIPTLEALDEKSEYEMWNGSGIF 296
           HPR S +LS+H IH++LS IPT+E   E S+ +MW+G  +F
Sbjct: 253 HPRASMDLSIHKIHYILSCIPTVEDPKENSDNKMWSGLVVF 293


>ref|XP_002884044.1| hypothetical protein ARALYDRAFT_480608 [Arabidopsis lyrata subsp.
            lyrata] gi|297329884|gb|EFH60303.1| hypothetical protein
            ARALYDRAFT_480608 [Arabidopsis lyrata subsp. lyrata]
          Length = 582

 Score =  408 bits (1048), Expect(2) = e-131
 Identities = 201/307 (65%), Positives = 244/307 (79%)
 Frame = +2

Query: 425  VAKKMKLKFTKAWISFLSLPLPLDVYKEVLVTLHQAVIPHLSNPIMLCDFLTRSYDIGGV 604
            ++K+MKLKFTKAWISFL LPLP+DVYKEVL ++H  VIPHLSNP MLCDFLT+SYDIGGV
Sbjct: 278  ISKRMKLKFTKAWISFLRLPLPIDVYKEVLASIHLTVIPHLSNPTMLCDFLTKSYDIGGV 337

Query: 605  ISVMALSSLYVLMTQHGLEYPNFYEKLYVLLEPSIFMAKHRSKFFQLLDSCXXXXXXXXX 784
            +SVMALSSL++LMTQHGLEYPNFYEKLY LL PS+F+AKHR+KF QLLD+C         
Sbjct: 338  VSVMALSSLFILMTQHGLEYPNFYEKLYALLVPSVFVAKHRAKFLQLLDACLKSSMLPAY 397

Query: 785  XXXXXXXXXXRLVLSVPPSGSLIIIALIHNLLRRHPSINCLVHREDGNGTAEDDLRAEKV 964
                      RL LS+PP+GSL+I ALI+NLLRRHP+IN LV +E    T E +  A   
Sbjct: 398  LAASFTKKLSRLSLSIPPAGSLVITALIYNLLRRHPTINHLV-QETVENTNEGNTEA--- 453

Query: 965  DDHVEDSSTSIDMSSKKPGIDHFNNEENDPVKTNAMRSSLWEIDTLRHHYCPPISRFVLS 1144
            D+H E    +I    +K GID+FNN+E+DP K+ A++SSLWEIDTLRHHYCPP+SRF+ S
Sbjct: 454  DEHNESQPKTI--KKRKLGIDYFNNQESDPKKSGALKSSLWEIDTLRHHYCPPVSRFISS 511

Query: 1145 LENDLTIRAKTIELAIKDFSSGSYATIFGEEIRRRVKQVPLAFYQATPTSLFSESDFPGW 1324
            LE +LTIR+KT E+ I+DFSSGSYATIFG+EIRRRVKQVPLAFY+  PTSLF++SDFPGW
Sbjct: 512  LETNLTIRSKTTEMKIEDFSSGSYATIFGDEIRRRVKQVPLAFYKTVPTSLFADSDFPGW 571

Query: 1325 TFKMKDD 1345
            +F +  +
Sbjct: 572  SFTIPQE 578



 Score = 87.8 bits (216), Expect(2) = e-131
 Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
 Frame = +3

Query: 6   IVESTSGVDTLSDFLESKYFKYIDVRFFTYISLEKLIRNLEMKNISDDKNVTDNG---SH 176
           I+ S   ++   D L SKYFKYIDVR+FTYIS+EK ++ LE  ++S D+   +N    + 
Sbjct: 155 IIHSEVDIEIFLDILTSKYFKYIDVRYFTYISMEKFVKTLE-ASVSADRTAIENSEAEND 213

Query: 177 PRISTELSVHNIHHLLSHIPTLEALDEKSEYEMWNGSGIFIKEGNHKKHAEVLKAEGKKR 356
            + S ELSV  I+ +LS IP  E L EKS +EMW+GS     E          K   KK+
Sbjct: 214 SKESLELSVRKIYQVLSQIPPPEKLAEKSHHEMWSGSDESSSE----------KPTDKKK 263

Query: 357 KTKNNSDS 380
           KT+    +
Sbjct: 264 KTEEGDST 271


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