BLASTX nr result

ID: Panax21_contig00016741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016741
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [...    88   2e-15
emb|CBI40396.3| unnamed protein product [Vitis vinifera]               88   2e-15
emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]    88   2e-15
ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com...    71   3e-10
ref|XP_002301364.1| chromatin remodeling complex subunit [Populu...    70   6e-10

>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
          Length = 2263

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 49/94 (52%), Positives = 56/94 (59%)
 Frame = -2

Query: 283 LLRKPEGNEAILAYXXXXXXXXXXXXXXXXXXGSMQLPQQSRKFIDLGQQHGSPNMREEV 104
           LLRKPEGNEA+LAY                   SMQLPQQ RKFIDL QQHG+ ++RE+ 
Sbjct: 63  LLRKPEGNEALLAYPGGGLQGVMGGGNFASSSSSMQLPQQPRKFIDLAQQHGASHIREDN 122

Query: 103 QNRSLGFDQQVLNPVHXXXXXXXXXXXXQKSALG 2
           QN+S G +Q VLNPVH            QKSALG
Sbjct: 123 QNKSQGVEQPVLNPVHQAYLQYAFQAAHQKSALG 156


>emb|CBI40396.3| unnamed protein product [Vitis vinifera]
          Length = 1981

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 49/94 (52%), Positives = 56/94 (59%)
 Frame = -2

Query: 283 LLRKPEGNEAILAYXXXXXXXXXXXXXXXXXXGSMQLPQQSRKFIDLGQQHGSPNMREEV 104
           LLRKPEGNEA+LAY                   SMQLPQQ RKFIDL QQHG+ ++RE+ 
Sbjct: 63  LLRKPEGNEALLAYPGGGLQGVMGGGNFASSSSSMQLPQQPRKFIDLAQQHGASHIREDN 122

Query: 103 QNRSLGFDQQVLNPVHXXXXXXXXXXXXQKSALG 2
           QN+S G +Q VLNPVH            QKSALG
Sbjct: 123 QNKSQGVEQPVLNPVHQAYLQYAFQAAHQKSALG 156


>emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]
          Length = 2238

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 50/94 (53%), Positives = 57/94 (60%)
 Frame = -2

Query: 283 LLRKPEGNEAILAYXXXXXXXXXXXXXXXXXXGSMQLPQQSRKFIDLGQQHGSPNMREEV 104
           LLRKPEGNEA+LAY                  GSMQLPQQ RKFIDL QQHG+ ++RE+ 
Sbjct: 63  LLRKPEGNEALLAYPGGGLQGVMGGGNFASSSGSMQLPQQPRKFIDLAQQHGASHIREDN 122

Query: 103 QNRSLGFDQQVLNPVHXXXXXXXXXXXXQKSALG 2
           QN+S G +Q VLNPVH            QKSALG
Sbjct: 123 QNKSQGVEQPVLNPVHQAYLQYAFQAAHQKSALG 156


>ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis]
           gi|223549062|gb|EEF50551.1| Chromo domain protein,
           putative [Ricinus communis]
          Length = 2248

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 40/76 (52%), Positives = 46/76 (60%)
 Frame = -2

Query: 283 LLRKPEGNEAILAYXXXXXXXXXXXXXXXXXXGSMQLPQQSRKFIDLGQQHGSPNMREEV 104
           LLRKPEGNEA+LAY                  GSMQ+PQQSRKF DL QQ    N  ++ 
Sbjct: 61  LLRKPEGNEALLAYQAGAFQGVIGGSNFAPSPGSMQMPQQSRKFFDLAQQQ---NSSQDG 117

Query: 103 QNRSLGFDQQVLNPVH 56
           QNR+   +QQVLNPVH
Sbjct: 118 QNRNQAVEQQVLNPVH 133


>ref|XP_002301364.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222843090|gb|EEE80637.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 2222

 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 43/93 (46%), Positives = 51/93 (54%)
 Frame = -2

Query: 283 LLRKPEGNEAILAYXXXXXXXXXXXXXXXXXXGSMQLPQQSRKFIDLGQQHGSPNMREEV 104
           LLRKPEGNEA+LAY                  GSMQ PQQSR+F DL +QHGS    ++ 
Sbjct: 64  LLRKPEGNEALLAYQAGALQGVTVGNNFASSPGSMQTPQQSRQFFDLARQHGS---SQDG 120

Query: 103 QNRSLGFDQQVLNPVHXXXXXXXXXXXXQKSAL 5
           QNR+ G +QQ LNP+             QKSAL
Sbjct: 121 QNRNQGVEQQALNPMQQAYLQYAFQAAQQKSAL 153


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