BLASTX nr result

ID: Panax21_contig00016735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016735
         (986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526573.1| conserved hypothetical protein [Ricinus comm...    71   4e-10

>ref|XP_002526573.1| conserved hypothetical protein [Ricinus communis]
           gi|223534134|gb|EEF35851.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 254

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 9/154 (5%)
 Frame = -1

Query: 812 IVFTIKECFRS-SSNSRIKTTTFLNTTH----SPQFPVNSVIDSP---SSPFYNFISTQI 657
           +  ++ +C+R+  S S  KT T    +     S +FP +S++      SS  ++ +S  I
Sbjct: 41  VTVSMDKCYRTWESFSLAKTVTKEIRSSCKEKSFKFPCHSLVSDDGTLSSSLWDLVSKTI 100

Query: 656 SQTNIPFPLEKIQWRERDTGNIKYLEDNNRDELIKLILNQAHGTLEKFSNCDR-KILAFG 480
           S   IPF L+++QWR       +++   N+DELI+ ILN AH      +  D+ K LAF 
Sbjct: 101 SDMEIPFSLDRLQWRASPKD--EWISLPNQDELIRQILNLAHCKASAITAADQPKELAFQ 158

Query: 479 INIERNVTLPDNEYQAMAMDKKKETDRQKLRHLV 378
           ++I++ + LP +E++AM   ++ E  RQK+   +
Sbjct: 159 VSIKKEIVLPHHEFEAMVNARRTEEVRQKITETI 192


Top