BLASTX nr result

ID: Panax21_contig00016729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016729
         (1463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39777.3| unnamed protein product [Vitis vinifera]              363   8e-98
ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop...   363   8e-98
ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ...   353   6e-95
ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-bindin...   352   1e-94
emb|CBI18525.3| unnamed protein product [Vitis vinifera]              336   1e-89

>emb|CBI39777.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score =  363 bits (931), Expect = 8e-98
 Identities = 177/208 (85%), Positives = 188/208 (90%)
 Frame = -3

Query: 1350 MDSKSKTDNPRLGDGASPGKIFIGGLPKDTHYNAFTKHFGKYGEITDSVIMKDRQTGQPR 1171
            M SKSK+DNP  GDGASPGKIFIGGL KDT Y  F KHFGKYG+ITDSVIMKDR TGQPR
Sbjct: 1    MGSKSKSDNPHTGDGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPR 60

Query: 1170 GFGFITYADPSVVDQVIEDSHIFNGKQVEIKRTIPKGSAQSKDFKTKKIFVGGIPSTVSE 991
            GFGFITYADPSVVD+VIED+H+ NGKQVEIKRTIPKGS QSKDFKTKKIFVGG+PSTV+E
Sbjct: 61   GFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTE 120

Query: 990  DELKNFFSKYGNVVEHQIICDHETNRSRGFGFVIFDSDEVVDELLSNGKMIDMAGTQVEI 811
            DE KNFFSKYG VVEHQII DHETNRSRGFGF+IFDS+EVVDE++S G MIDMAGTQVEI
Sbjct: 121  DEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEI 180

Query: 810  KKAEPKKASNQLPAPAYASKSRARSFSD 727
            KKAEPKKASN  PAPAY S SRARSFSD
Sbjct: 181  KKAEPKKASNPPPAPAYGSNSRARSFSD 208


>ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
            vinifera] gi|147768836|emb|CAN78130.1| hypothetical
            protein VITISV_036088 [Vitis vinifera]
          Length = 348

 Score =  363 bits (931), Expect = 8e-98
 Identities = 177/208 (85%), Positives = 188/208 (90%)
 Frame = -3

Query: 1350 MDSKSKTDNPRLGDGASPGKIFIGGLPKDTHYNAFTKHFGKYGEITDSVIMKDRQTGQPR 1171
            M SKSK+DNP  GDGASPGKIFIGGL KDT Y  F KHFGKYG+ITDSVIMKDR TGQPR
Sbjct: 1    MGSKSKSDNPHTGDGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPR 60

Query: 1170 GFGFITYADPSVVDQVIEDSHIFNGKQVEIKRTIPKGSAQSKDFKTKKIFVGGIPSTVSE 991
            GFGFITYADPSVVD+VIED+H+ NGKQVEIKRTIPKGS QSKDFKTKKIFVGG+PSTV+E
Sbjct: 61   GFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTE 120

Query: 990  DELKNFFSKYGNVVEHQIICDHETNRSRGFGFVIFDSDEVVDELLSNGKMIDMAGTQVEI 811
            DE KNFFSKYG VVEHQII DHETNRSRGFGF+IFDS+EVVDE++S G MIDMAGTQVEI
Sbjct: 121  DEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEI 180

Query: 810  KKAEPKKASNQLPAPAYASKSRARSFSD 727
            KKAEPKKASN  PAPAY S SRARSFSD
Sbjct: 181  KKAEPKKASNPPPAPAYGSNSRARSFSD 208


>ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
            communis] gi|223538031|gb|EEF39644.1| Heterogeneous
            nuclear ribonucleoprotein A1, putative [Ricinus communis]
          Length = 348

 Score =  353 bits (906), Expect = 6e-95
 Identities = 172/208 (82%), Positives = 186/208 (89%)
 Frame = -3

Query: 1350 MDSKSKTDNPRLGDGASPGKIFIGGLPKDTHYNAFTKHFGKYGEITDSVIMKDRQTGQPR 1171
            M SKSK+DNP  GDGASPGKIFIGGL KDT Y  F KHFG+YGEITDSVIMKDR TGQPR
Sbjct: 1    MASKSKSDNPHSGDGASPGKIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPR 60

Query: 1170 GFGFITYADPSVVDQVIEDSHIFNGKQVEIKRTIPKGSAQSKDFKTKKIFVGGIPSTVSE 991
            GFGFITYADPSVVD+VIED+H+ +GKQVEIKRTIPKGS QSKDFKTKKIFVGGIPS+V+E
Sbjct: 61   GFGFITYADPSVVDKVIEDTHVIHGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTE 120

Query: 990  DELKNFFSKYGNVVEHQIICDHETNRSRGFGFVIFDSDEVVDELLSNGKMIDMAGTQVEI 811
            DE K FFSKYG VVEHQII DHETNRSRGFGF+IFDS+E VDE+LSNG MIDMAGTQVEI
Sbjct: 121  DEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAGTQVEI 180

Query: 810  KKAEPKKASNQLPAPAYASKSRARSFSD 727
            KKAEPKKASN  PAP+Y S SR RS++D
Sbjct: 181  KKAEPKKASNPPPAPSYGSNSRGRSYND 208


>ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like [Cucumis
            sativus] gi|449496860|ref|XP_004160246.1| PREDICTED:
            nuclear polyadenylated RNA-binding protein 4-like
            [Cucumis sativus]
          Length = 347

 Score =  352 bits (904), Expect = 1e-94
 Identities = 169/208 (81%), Positives = 186/208 (89%)
 Frame = -3

Query: 1350 MDSKSKTDNPRLGDGASPGKIFIGGLPKDTHYNAFTKHFGKYGEITDSVIMKDRQTGQPR 1171
            M SKSK++NP  GDGASPGKIFIGGL KDT Y  F KHFG YGEITDSVIMKDR TGQPR
Sbjct: 1    MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 1170 GFGFITYADPSVVDQVIEDSHIFNGKQVEIKRTIPKGSAQSKDFKTKKIFVGGIPSTVSE 991
            GFGFITYADPSVVD+VIED+H+ NGKQVEIKRTIPKG  QSKDFKTKKIFVGGIPSTV+E
Sbjct: 61   GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 990  DELKNFFSKYGNVVEHQIICDHETNRSRGFGFVIFDSDEVVDELLSNGKMIDMAGTQVEI 811
            DE K+FFSKYG +VEHQII DHETNRSRGFGF++F+ +EVVDE+LS G MIDM+GTQVEI
Sbjct: 121  DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 810  KKAEPKKASNQLPAPAYASKSRARSFSD 727
            KKAEPKK+SN LPAPAY S SRAR+F+D
Sbjct: 181  KKAEPKKSSNPLPAPAYGSNSRARTFND 208


>emb|CBI18525.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  336 bits (861), Expect = 1e-89
 Identities = 167/208 (80%), Positives = 179/208 (86%)
 Frame = -3

Query: 1350 MDSKSKTDNPRLGDGASPGKIFIGGLPKDTHYNAFTKHFGKYGEITDSVIMKDRQTGQPR 1171
            M SK K +    GDGASPGKIFIGGL KDT Y AF KHF KYGEITDSVIMKDR TGQPR
Sbjct: 1    MGSKLKGNTTHTGDGASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPR 60

Query: 1170 GFGFITYADPSVVDQVIEDSHIFNGKQVEIKRTIPKGSAQSKDFKTKKIFVGGIPSTVSE 991
            GFGF+TYADPSVVD VIED+H+ NGKQVEIKRTIPKGS QSKDFKTKKIFVGG+PSTV+E
Sbjct: 61   GFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTVTE 120

Query: 990  DELKNFFSKYGNVVEHQIICDHETNRSRGFGFVIFDSDEVVDELLSNGKMIDMAGTQVEI 811
            DE K+FFSKYG V EHQII DHETNRSRGFGF+IF+S+EVVDE+LS G MIDMAGTQVEI
Sbjct: 121  DEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEI 180

Query: 810  KKAEPKKASNQLPAPAYASKSRARSFSD 727
            KKAEPKKASN     A+ S SRARSFSD
Sbjct: 181  KKAEPKKASNPPHVSAFGSNSRARSFSD 208


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