BLASTX nr result
ID: Panax21_contig00016729
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00016729 (1463 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI39777.3| unnamed protein product [Vitis vinifera] 363 8e-98 ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop... 363 8e-98 ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ... 353 6e-95 ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-bindin... 352 1e-94 emb|CBI18525.3| unnamed protein product [Vitis vinifera] 336 1e-89 >emb|CBI39777.3| unnamed protein product [Vitis vinifera] Length = 293 Score = 363 bits (931), Expect = 8e-98 Identities = 177/208 (85%), Positives = 188/208 (90%) Frame = -3 Query: 1350 MDSKSKTDNPRLGDGASPGKIFIGGLPKDTHYNAFTKHFGKYGEITDSVIMKDRQTGQPR 1171 M SKSK+DNP GDGASPGKIFIGGL KDT Y F KHFGKYG+ITDSVIMKDR TGQPR Sbjct: 1 MGSKSKSDNPHTGDGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPR 60 Query: 1170 GFGFITYADPSVVDQVIEDSHIFNGKQVEIKRTIPKGSAQSKDFKTKKIFVGGIPSTVSE 991 GFGFITYADPSVVD+VIED+H+ NGKQVEIKRTIPKGS QSKDFKTKKIFVGG+PSTV+E Sbjct: 61 GFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTE 120 Query: 990 DELKNFFSKYGNVVEHQIICDHETNRSRGFGFVIFDSDEVVDELLSNGKMIDMAGTQVEI 811 DE KNFFSKYG VVEHQII DHETNRSRGFGF+IFDS+EVVDE++S G MIDMAGTQVEI Sbjct: 121 DEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEI 180 Query: 810 KKAEPKKASNQLPAPAYASKSRARSFSD 727 KKAEPKKASN PAPAY S SRARSFSD Sbjct: 181 KKAEPKKASNPPPAPAYGSNSRARSFSD 208 >ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis vinifera] gi|147768836|emb|CAN78130.1| hypothetical protein VITISV_036088 [Vitis vinifera] Length = 348 Score = 363 bits (931), Expect = 8e-98 Identities = 177/208 (85%), Positives = 188/208 (90%) Frame = -3 Query: 1350 MDSKSKTDNPRLGDGASPGKIFIGGLPKDTHYNAFTKHFGKYGEITDSVIMKDRQTGQPR 1171 M SKSK+DNP GDGASPGKIFIGGL KDT Y F KHFGKYG+ITDSVIMKDR TGQPR Sbjct: 1 MGSKSKSDNPHTGDGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPR 60 Query: 1170 GFGFITYADPSVVDQVIEDSHIFNGKQVEIKRTIPKGSAQSKDFKTKKIFVGGIPSTVSE 991 GFGFITYADPSVVD+VIED+H+ NGKQVEIKRTIPKGS QSKDFKTKKIFVGG+PSTV+E Sbjct: 61 GFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTE 120 Query: 990 DELKNFFSKYGNVVEHQIICDHETNRSRGFGFVIFDSDEVVDELLSNGKMIDMAGTQVEI 811 DE KNFFSKYG VVEHQII DHETNRSRGFGF+IFDS+EVVDE++S G MIDMAGTQVEI Sbjct: 121 DEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEI 180 Query: 810 KKAEPKKASNQLPAPAYASKSRARSFSD 727 KKAEPKKASN PAPAY S SRARSFSD Sbjct: 181 KKAEPKKASNPPPAPAYGSNSRARSFSD 208 >ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus communis] gi|223538031|gb|EEF39644.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus communis] Length = 348 Score = 353 bits (906), Expect = 6e-95 Identities = 172/208 (82%), Positives = 186/208 (89%) Frame = -3 Query: 1350 MDSKSKTDNPRLGDGASPGKIFIGGLPKDTHYNAFTKHFGKYGEITDSVIMKDRQTGQPR 1171 M SKSK+DNP GDGASPGKIFIGGL KDT Y F KHFG+YGEITDSVIMKDR TGQPR Sbjct: 1 MASKSKSDNPHSGDGASPGKIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPR 60 Query: 1170 GFGFITYADPSVVDQVIEDSHIFNGKQVEIKRTIPKGSAQSKDFKTKKIFVGGIPSTVSE 991 GFGFITYADPSVVD+VIED+H+ +GKQVEIKRTIPKGS QSKDFKTKKIFVGGIPS+V+E Sbjct: 61 GFGFITYADPSVVDKVIEDTHVIHGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTE 120 Query: 990 DELKNFFSKYGNVVEHQIICDHETNRSRGFGFVIFDSDEVVDELLSNGKMIDMAGTQVEI 811 DE K FFSKYG VVEHQII DHETNRSRGFGF+IFDS+E VDE+LSNG MIDMAGTQVEI Sbjct: 121 DEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAGTQVEI 180 Query: 810 KKAEPKKASNQLPAPAYASKSRARSFSD 727 KKAEPKKASN PAP+Y S SR RS++D Sbjct: 181 KKAEPKKASNPPPAPSYGSNSRGRSYND 208 >ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like [Cucumis sativus] gi|449496860|ref|XP_004160246.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like [Cucumis sativus] Length = 347 Score = 352 bits (904), Expect = 1e-94 Identities = 169/208 (81%), Positives = 186/208 (89%) Frame = -3 Query: 1350 MDSKSKTDNPRLGDGASPGKIFIGGLPKDTHYNAFTKHFGKYGEITDSVIMKDRQTGQPR 1171 M SKSK++NP GDGASPGKIFIGGL KDT Y F KHFG YGEITDSVIMKDR TGQPR Sbjct: 1 MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60 Query: 1170 GFGFITYADPSVVDQVIEDSHIFNGKQVEIKRTIPKGSAQSKDFKTKKIFVGGIPSTVSE 991 GFGFITYADPSVVD+VIED+H+ NGKQVEIKRTIPKG QSKDFKTKKIFVGGIPSTV+E Sbjct: 61 GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120 Query: 990 DELKNFFSKYGNVVEHQIICDHETNRSRGFGFVIFDSDEVVDELLSNGKMIDMAGTQVEI 811 DE K+FFSKYG +VEHQII DHETNRSRGFGF++F+ +EVVDE+LS G MIDM+GTQVEI Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180 Query: 810 KKAEPKKASNQLPAPAYASKSRARSFSD 727 KKAEPKK+SN LPAPAY S SRAR+F+D Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARTFND 208 >emb|CBI18525.3| unnamed protein product [Vitis vinifera] Length = 242 Score = 336 bits (861), Expect = 1e-89 Identities = 167/208 (80%), Positives = 179/208 (86%) Frame = -3 Query: 1350 MDSKSKTDNPRLGDGASPGKIFIGGLPKDTHYNAFTKHFGKYGEITDSVIMKDRQTGQPR 1171 M SK K + GDGASPGKIFIGGL KDT Y AF KHF KYGEITDSVIMKDR TGQPR Sbjct: 1 MGSKLKGNTTHTGDGASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPR 60 Query: 1170 GFGFITYADPSVVDQVIEDSHIFNGKQVEIKRTIPKGSAQSKDFKTKKIFVGGIPSTVSE 991 GFGF+TYADPSVVD VIED+H+ NGKQVEIKRTIPKGS QSKDFKTKKIFVGG+PSTV+E Sbjct: 61 GFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTVTE 120 Query: 990 DELKNFFSKYGNVVEHQIICDHETNRSRGFGFVIFDSDEVVDELLSNGKMIDMAGTQVEI 811 DE K+FFSKYG V EHQII DHETNRSRGFGF+IF+S+EVVDE+LS G MIDMAGTQVEI Sbjct: 121 DEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEI 180 Query: 810 KKAEPKKASNQLPAPAYASKSRARSFSD 727 KKAEPKKASN A+ S SRARSFSD Sbjct: 181 KKAEPKKASNPPHVSAFGSNSRARSFSD 208