BLASTX nr result

ID: Panax21_contig00016683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016683
         (1454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95695.1| unknown [Populus trichocarpa]                          100   2e-18
ref|XP_002274123.2| PREDICTED: probable ubiquitin-conjugating en...    88   5e-15
emb|CAN79081.1| hypothetical protein VITISV_004820 [Vitis vinifera]    88   6e-15
emb|CBI21855.3| unnamed protein product [Vitis vinifera]               76   3e-11
ref|XP_002517911.1| ubiquitin conjugating enzyme, putative [Rici...    75   3e-11

>gb|ABK95695.1| unknown [Populus trichocarpa]
          Length = 526

 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 68/194 (35%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
 Frame = -2

Query: 841 ELGNSTSIVGS----------TSGSPYSANIQGSNSDMSYHGDD---NXXXXXXXXXXXX 701
           +LGN TS+ GS          TSGS  S N  GSNSDMSYH D+   +            
Sbjct: 69  DLGNYTSVAGSVDSAYHLRGSTSGSTNSNNNNGSNSDMSYHDDEVGNDCDDYADENDCDD 128

Query: 700 XXXXXXXXXXXXXGYLNMQAQFDNVDFPPGVEISFSWMKHTTPSINVTSNNAM------V 539
                         Y  +Q+QFDNVD PPGVE +  W+K    S N+ SN +        
Sbjct: 129 HDGYLYYDDEDEDDYSAIQSQFDNVDLPPGVEATLPWLKEPASSSNMISNTSTSTIPNHT 188

Query: 538 LP--TGSGTETSVAIVPDLXXXXXXXXXXXXSTFPAGLNSDGKEEVEKEHDIMKNYQSFK 365
           +P  T      S  +                S FPA  +S+G+ E   E++ M+ Y++FK
Sbjct: 189 IPSHTNHNHSESKIMTTTCLSENKWTASASSSMFPADSSSNGEVEDSGENNTMQKYRNFK 248

Query: 364 RFDIVNDFSDHHYR 323
           +FD V DFSDHHYR
Sbjct: 249 QFDNVEDFSDHHYR 262


>ref|XP_002274123.2| PREDICTED: probable ubiquitin-conjugating enzyme E2 26-like [Vitis
           vinifera]
          Length = 511

 Score = 88.2 bits (217), Expect = 5e-15
 Identities = 68/195 (34%), Positives = 87/195 (44%), Gaps = 12/195 (6%)
 Frame = -2

Query: 850 IAMELGNSTSIVGS----------TSGSPYSANIQGSNSDMSYHGDDNXXXXXXXXXXXX 701
           +A ++ N TS  GS           SGS    NI G NSD+SYH DD             
Sbjct: 72  LANDVRNPTSEAGSEDSPDPLKSFASGSSDLININGFNSDLSYHDDD---AIDDDDDDDV 128

Query: 700 XXXXXXXXXXXXXGYLNMQAQFDNVDFPPGVEISFSWMKHTTPSINVTS-NNAMVLPTGS 524
                         YL +QAQFDNVD PPGVE S  W+K  TPS  + +  +    P+  
Sbjct: 129 SGYDDNDDFLYDDDYLKLQAQFDNVDIPPGVEASVPWLKDPTPSEKMPAVVDTSPTPSLQ 188

Query: 523 GTETSVAIVPDLXXXXXXXXXXXXSTFPAGLNSDGKEEVEKEHDIMKNYQSFKRFDIVND 344
           G    V    D             ST PA  + DG ++     D++  Y  FK+FD V D
Sbjct: 189 GQCARVGSFSDPGEKETKTAATSSSTVPA-QSGDGNQD-----DVLGKYLFFKQFDTVED 242

Query: 343 FSDHHY-RLGFRVQQ 302
           FSDHH+ R+GF  +Q
Sbjct: 243 FSDHHFSRMGFVGEQ 257


>emb|CAN79081.1| hypothetical protein VITISV_004820 [Vitis vinifera]
          Length = 532

 Score = 87.8 bits (216), Expect = 6e-15
 Identities = 67/195 (34%), Positives = 87/195 (44%), Gaps = 12/195 (6%)
 Frame = -2

Query: 850 IAMELGNSTSIVGS----------TSGSPYSANIQGSNSDMSYHGDDNXXXXXXXXXXXX 701
           +A ++ N TS  GS           SGS    NI G NSD+SYH DD             
Sbjct: 72  LANDVRNPTSEAGSEDSPDPLKSFASGSSDLININGFNSDLSYHDDD---AIDDDDDDDV 128

Query: 700 XXXXXXXXXXXXXGYLNMQAQFDNVDFPPGVEISFSWMKHTTPSINVTS-NNAMVLPTGS 524
                         YL +QAQFDNVD PPGV+ S  W+K  TPS  + +  +    P+  
Sbjct: 129 SGYDDNDDFLYDDDYLKLQAQFDNVDIPPGVZASVPWLKDPTPSEKMPAVVDTSPTPSLQ 188

Query: 523 GTETSVAIVPDLXXXXXXXXXXXXSTFPAGLNSDGKEEVEKEHDIMKNYQSFKRFDIVND 344
           G    V    D             ST PA  + DG ++     D++  Y  FK+FD V D
Sbjct: 189 GQCAPVGSFSDPGEKETKTAATSSSTVPA-QSGDGNQD-----DVLGKYLFFKQFDTVED 242

Query: 343 FSDHHY-RLGFRVQQ 302
           FSDHH+ R+GF  +Q
Sbjct: 243 FSDHHFSRMGFVGEQ 257


>emb|CBI21855.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score = 75.9 bits (185), Expect = 3e-11
 Identities = 63/194 (32%), Positives = 77/194 (39%), Gaps = 11/194 (5%)
 Frame = -2

Query: 850 IAMELGNSTSIVGS----------TSGSPYSANIQGSNSDMSYHGDDNXXXXXXXXXXXX 701
           +A ++ N TS  GS           SGS    NI G NSD+SYH DD             
Sbjct: 72  LANDVRNPTSEAGSEDSPDPLKSFASGSSDLININGFNSDLSYHDDD---AIDDDDDDDV 128

Query: 700 XXXXXXXXXXXXXGYLNMQAQFDNVDFPPGVEISFSWMKHTTPSINVTSNNAMVLPTGSG 521
                         YL +QAQFDNVD PPGVE S  W+K  TPS                
Sbjct: 129 SGYDDNDDFLYDDDYLKLQAQFDNVDIPPGVEASVPWLKDPTPS---------------- 172

Query: 520 TETSVAIVPDLXXXXXXXXXXXXSTFPAGLNSDGKEEVEKEHDIMKNYQSFKRFDIVNDF 341
            E   A+V                T P              +D++  Y  FK+FD V DF
Sbjct: 173 -EKMPAVV---------------DTSPT------------PNDVLGKYLFFKQFDTVEDF 204

Query: 340 SDHHY-RLGFRVQQ 302
           SDHH+ R+GF  +Q
Sbjct: 205 SDHHFSRMGFVGEQ 218


>ref|XP_002517911.1| ubiquitin conjugating enzyme, putative [Ricinus communis]
           gi|223542893|gb|EEF44429.1| ubiquitin conjugating
           enzyme, putative [Ricinus communis]
          Length = 521

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 56/171 (32%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
 Frame = -2

Query: 811 STSGSPYSANIQGSNSDMSYHGDDNXXXXXXXXXXXXXXXXXXXXXXXXXG----YLNMQ 644
           STSGS    NI GS SD+SYH DD+                              YL  Q
Sbjct: 77  STSGSISLNNINGSLSDLSYHDDDDVTFDDDGGGADDYYYYYYDDDDEYLYEEEDYLAYQ 136

Query: 643 AQFDNVDFPPGVEISFSWMKHTTPS-INV--TSNNAMVLPTGSGTETSVAIVPDLXXXXX 473
           +QFDNVD P GVE S  W+K    S  N   TS + M  P+ S  ++ +  + +      
Sbjct: 137 SQFDNVDLPAGVEASLPWLKEPANSGFNTPGTSTSTMSDPSESKRKSVILDIAETKRKAT 196

Query: 472 XXXXXXXSTFPA--GLNSDGKEEVEKEHDIMKNYQSFKRFDIVNDFSDHHY 326
                  ++  A    +S+G+E   K   ++   ++FK+FD V DFSDHHY
Sbjct: 197 GSGLSENNSSAATTASSSNGEEIDNKRKGVLHILKNFKQFDTVEDFSDHHY 247


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