BLASTX nr result

ID: Panax21_contig00016665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016665
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535295.1| conserved hypothetical protein [Ricinus comm...   103   5e-32
emb|CAA27743.1| URF-1 [Citrullus lanatus]                             119   5e-25
sp|P08834.1|NU1M_CITLA RecName: Full=NADH-ubiquinone oxidoreduct...   116   4e-24
ref|YP_002608374.1| orf102 [Vitis vinifera] gi|209954171|emb|CAQ...    88   9e-23
gb|AFW63421.1| hypothetical protein ZEAMMB73_397358 [Zea mays] g...   105   6e-21

>ref|XP_002535295.1| conserved hypothetical protein [Ricinus communis]
           gi|223523525|gb|EEF27089.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 139

 Score =  103 bits (257), Expect(2) = 5e-32
 Identities = 59/96 (61%), Positives = 63/96 (65%)
 Frame = +1

Query: 328 KKQIPPPMLPRSAYRGIERKDPGPEQVGLGYRAVSAVGGDRGRARTVHIRI*KSR*LLGT 507
           K    PPMLP+SAYRGIER+DPGPEQVGLGYRAVSA+GGDRGRAR               
Sbjct: 57  KADTAPPMLPQSAYRGIEREDPGPEQVGLGYRAVSAMGGDRGRAR--------------- 101

Query: 508 FTPLYSKYAFLGALRSAAQMVSYEVSIGLILITVLI 615
                       ALRSAAQMVSYEVSIGLILI  L+
Sbjct: 102 ------------ALRSAAQMVSYEVSIGLILIVRLV 125



 Score = 60.5 bits (145), Expect(2) = 5e-32
 Identities = 36/48 (75%), Positives = 39/48 (81%), Gaps = 2/48 (4%)
 Frame = +3

Query: 210 ASSSEKDVSDATLPARTTF--VNFLAGSVRRDKREMLSISKKKADTAP 347
           ASSS+KDVSDATL ARTTF  V FLAGSVRRDKRE+    + KADTAP
Sbjct: 17  ASSSDKDVSDATLSARTTFSIVIFLAGSVRRDKREI--FYQSKADTAP 62


>emb|CAA27743.1| URF-1 [Citrullus lanatus]
          Length = 316

 Score =  119 bits (298), Expect = 5e-25
 Identities = 80/153 (52%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
 Frame = +1

Query: 208 EPPPQRKMSPTRLSRQEPLL*IFWRVRSGGT---KERCFLSVKKKQIPPPMLPRSAYRGI 378
           +PPPQ KMSP RLSRQEP     +    G     KERCF SVK +  PP   P    R  
Sbjct: 16  KPPPQIKMSPMRLSRQEPFFDCDFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNR 75

Query: 379 ERKDPGPEQVGLGYRAVSAVGGDRGRARTVHIRI*KSR*LLGTFTPLYSKYAFLGALRSA 558
           + +  G     +G ++    GG                 LLGTFTPLYSKYAFLGALRSA
Sbjct: 76  KGRT-GARASWVGVKSRKRGGG-----------------LLGTFTPLYSKYAFLGALRSA 117

Query: 559 AQMVSYEVSIGLILITVLICVGSCNLSEIVMAQ 657
           AQMV YEVSIGLILI  LICVG  N SEIVMAQ
Sbjct: 118 AQMVPYEVSIGLILIVRLICVGPRNSSEIVMAQ 150


>sp|P08834.1|NU1M_CITLA RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName:
           Full=NADH dehydrogenase subunit 1
          Length = 316

 Score =  116 bits (290), Expect = 4e-24
 Identities = 79/153 (51%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
 Frame = +1

Query: 208 EPPPQRKMSPTRLSRQEPLL*IFWRVRSGGT---KERCFLSVKKKQIPPPMLPRSAYRGI 378
           +PPPQ KMSP RLS QEP     +    G     KERCF SVK +  PP   P    R  
Sbjct: 16  KPPPQIKMSPMRLSWQEPFFDCDFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNR 75

Query: 379 ERKDPGPEQVGLGYRAVSAVGGDRGRARTVHIRI*KSR*LLGTFTPLYSKYAFLGALRSA 558
           + +  G     +G ++    GG                 LLGTFTPLYSKYAFLGALRSA
Sbjct: 76  KGRT-GARASWVGVKSRKRGGG-----------------LLGTFTPLYSKYAFLGALRSA 117

Query: 559 AQMVSYEVSIGLILITVLICVGSCNLSEIVMAQ 657
           AQMV YEVSIGLILI  LICVG  N SEIVMAQ
Sbjct: 118 AQMVPYEVSIGLILIVRLICVGPRNSSEIVMAQ 150


>ref|YP_002608374.1| orf102 [Vitis vinifera] gi|209954171|emb|CAQ77618.1| orf102 [Vitis
           vinifera] gi|239764768|gb|ACS15237.1| ORF102 [Vitis
           vinifera]
          Length = 101

 Score = 88.2 bits (217), Expect(2) = 9e-23
 Identities = 48/59 (81%), Positives = 50/59 (84%), Gaps = 2/59 (3%)
 Frame = +3

Query: 249 PARTTF--VNFLAGSVRRDKREMLSISKKKADTAPHAPTVRLPRNRKEGPGARASWVGV 419
           PARTT   V FLAGSVRRDKREMLSIS+K+    PHAPTVRLPRNRK GPGARASWVGV
Sbjct: 44  PARTTILIVIFLAGSVRRDKREMLSISQKQIPP-PHAPTVRLPRNRKGGPGARASWVGV 101



 Score = 44.7 bits (104), Expect(2) = 9e-23
 Identities = 25/29 (86%), Positives = 25/29 (86%)
 Frame = +2

Query: 119 MSLKQSDSVLSLFSFRIPRMSRPILTSFM 205
           MSLKQS  VLSL  FRIPRMSRPILTSFM
Sbjct: 1   MSLKQS--VLSLLYFRIPRMSRPILTSFM 27


>gb|AFW63421.1| hypothetical protein ZEAMMB73_397358 [Zea mays]
           gi|413923490|gb|AFW63422.1| hypothetical protein
           ZEAMMB73_397358 [Zea mays] gi|413923799|gb|AFW63731.1|
           hypothetical protein ZEAMMB73_879039 [Zea mays]
           gi|413923800|gb|AFW63732.1| hypothetical protein
           ZEAMMB73_879039 [Zea mays]
          Length = 172

 Score =  105 bits (263), Expect = 6e-21
 Identities = 74/147 (50%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
 Frame = +1

Query: 181 PADPNIIYEEPPPQRKMSPTRLSRQEPLL*IFWRVRSGGTKERCFLSVKKKQIPPPMLPR 360
           PADPNII EEP  +   S   +S    L      + SGG K+     +  K+IPP     
Sbjct: 20  PADPNIILEEPDDEASKSDKDVSDATGLQ---LYMGSGGKKKDMLFPISPKRIPPSFHGP 76

Query: 361 SAYRGIERKDPGPEQVGLGYRAVSAVGGDRGRARTVHIRI*KSR*LLGTF--TPLYSKYA 534
                + R+DPGPEQVGLGYRAVSAVG        V +R      +L      PLYSKYA
Sbjct: 77  LTEEEM-REDPGPEQVGLGYRAVSAVGV----TEDVLVRFIVGYDILVDCWERPLYSKYA 131

Query: 535 FLGALRSAAQMVSYEVSIGLILITVLI 615
           FLGALRSAAQMVSYEVSIGLILI  L+
Sbjct: 132 FLGALRSAAQMVSYEVSIGLILIVRLV 158


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