BLASTX nr result

ID: Panax21_contig00016647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016647
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    74   9e-12
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    74   2e-11
gb|ACY69610.1| TIR-NBS-LRR resistance-like protein RGC151 [Helia...    72   6e-11
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    68   9e-10

>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 60/148 (40%), Positives = 83/148 (56%), Gaps = 4/148 (2%)
 Frame = +1

Query: 1   LKPWNVIFWSWLFKPKRNPEIINLS---LPRSLVSLELSNCNIFENSFPKDXXXXXXXXX 171
           L+ W + +WSWLF P+R+ +  + S   LP SLV L L++CNI ++  P D         
Sbjct: 89  LQSWQLNWWSWLF-PRRSLQSTSFSFTFLPCSLVKLSLADCNITDDVIPDDLSSLPALEH 147

Query: 172 XXXDKNSIEALPESIETLPNLEYLSVNYCNRLRSMIGLPCSVRYLDAEDVTSLGRITFKS 351
               KN I+ LPES+ +L  L+ L +N+C  LRS+  LP S++ L AE  T L RI   +
Sbjct: 148 LNLSKNPIQTLPESMNSLSMLQDLLLNHCRSLRSLPELPTSLKKLRAEKCTKLERIA--N 205

Query: 352 KPQLLRNFDYEL-GSSRLT*VEGFFRLE 432
            P LLR+    L G  RL  V+G F LE
Sbjct: 206 LPNLLRSLRLNLIGCKRLVQVQGLFNLE 233


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 51/136 (37%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
 Frame = +1

Query: 28   SWLFKPKRNPEIINLSLPRSLVSLELSNCNIFENSFPKDXXXXXXXXXXXXDKNSIEALP 207
            SWL +          SLPR LVSL L++C + +N  P D              N    LP
Sbjct: 800  SWLLQRWAKSRFSLSSLPRFLVSLSLADCCLSDNVIPGDLSCLPSLEYLNLSGNPFRFLP 859

Query: 208  ESIETLPNLEYLSVNYCNRLRSMIGLPCSVRYLDAEDVTSLGRITFKSKPQLLRNFDYEL 387
            ESI +L  L  L ++ C  L+S+  LP  +  L AED TSL RIT  + P LL++ + E+
Sbjct: 860  ESINSLGMLHSLVLDRCISLKSIPELPTDLNSLKAEDCTSLERIT--NLPNLLKSLNLEI 917

Query: 388  -GSSRLT*VEGFFRLE 432
             G   L  V+G F+LE
Sbjct: 918  FGCDSLVEVQGLFKLE 933


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 2/145 (1%)
 Frame = +1

Query: 4    KPWNVIFWSWLFKPKRNPEIINLS-LPRSLVSLELSNCNIFENSFPKDXXXXXXXXXXXX 180
            K   + FWSWL + +     + L+ LP SL  L L++C++ +++   D            
Sbjct: 782  KSRQLTFWSWLSRRQGMDSSLALTFLPCSLDHLSLADCDLSDDTV--DLSCLSSLKCLNL 839

Query: 181  DKNSIEALPESIETLPNLEYLSVNYCNRLRSMIGLPCSVRYLDAEDVTSLGRITFKSKPQ 360
              NSI  LP++I  L  LE L ++ C  L+S+  LP S+R L+AE+ TSL RIT  + P 
Sbjct: 840  SGNSISCLPKTISGLTKLESLVLDNCRSLQSLSELPASLRELNAENCTSLERIT--NLPN 897

Query: 361  LLRNFDYEL-GSSRLT*VEGFFRLE 432
            L+ +    L G  +L  V+GFF+LE
Sbjct: 898  LMTSLRLNLAGCEQLVEVQGFFKLE 922


>gb|ACY69610.1| TIR-NBS-LRR resistance-like protein RGC151 [Helianthus annuus]
          Length = 1021

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/99 (36%), Positives = 55/99 (55%)
 Frame = +1

Query: 49   RNPEIINLSLPRSLVSLELSNCNIFENSFPKDXXXXXXXXXXXXDKNSIEALPESIETLP 228
            R PE    SLPRSLV+L L NCN++  SFP D            D N ++++P+ +++L 
Sbjct: 811  RTPESFASSLPRSLVTLSLKNCNLYNESFPMDFSNLPMLKKLYLDGNPMDSMPDCVKSLS 870

Query: 229  NLEYLSVNYCNRLRSMIGLPCSVRYLDAEDVTSLGRITF 345
             LE LS  +C  L++++  P  ++ LD     SL + TF
Sbjct: 871  RLETLSFCWCRNLKTVLCAPIQLKQLDILFCDSLEKTTF 909


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
 Frame = +1

Query: 106  SNCNIFENSFPKDXXXXXXXXXXXXDKNSIEALPESIETLPNLEYLSVNYCNRLRSMIGL 285
            ++CN+ + + P D              N I ++PESI +L  L+YL ++ C RL+S+  L
Sbjct: 737  ADCNLSDVAIPNDLRCLRSLESLDLKGNPIYSIPESINSLTTLQYLCLDKCTRLQSLPQL 796

Query: 286  PCSVRYLDAEDVTSLGRITFKSKPQLLRNFDYEL-GSSRLT*VEGFFRLE 432
            P S+  L AE  TSL RIT  + P LL     EL G  +L  V+G F+LE
Sbjct: 797  PTSLEELKAEGCTSLERIT--NLPNLLSTLQVELFGCGQLVEVQGLFKLE 844


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