BLASTX nr result

ID: Panax21_contig00016646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016646
         (1303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...   197   5e-48
ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vi...   153   1e-34
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...   146   1e-32
ref|XP_002276075.2| PREDICTED: TMV resistance protein N-like [Vi...   143   1e-31
emb|CAN72303.1| hypothetical protein VITISV_009715 [Vitis vinifera]   140   9e-31

>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score =  197 bits (501), Expect = 5e-48
 Identities = 148/438 (33%), Positives = 195/438 (44%), Gaps = 12/438 (2%)
 Frame = -3

Query: 1295 PGKRSRLWHHEDSFNVMKGNEGTESIEGLALDLDDSVK-LSFSSNYPNSLGINKVTSLVK 1119
            PG RSRLWHHED+  V++ N GTE+I GL LDL   ++    S +  N         L+ 
Sbjct: 504  PGSRSRLWHHEDTLTVLRENIGTEAIRGLTLDLQIIMQEQQHSISCINCAKRQHYEDLIS 563

Query: 1118 PY------FSFLSRPSEHTASRDP----SGVELSIKAFEXXXXXXXXXXKHVQFTGSYEH 969
             Y        F S          P    + V    KAF            +V+  G YEH
Sbjct: 564  KYREKRSRLGFFSWQPAEVGLIPPFPMSNEVVFETKAFAKMRQLKLLQLNYVKLDGRYEH 623

Query: 968  FPRNLAWLSWHEFPLYYIPTDLPLPNLVALDLHYSMLEQVWDRTMVGHXXXXXXXXXXXX 789
            FPRNL WL WH FP+  IP  L L NLV LD+ YS L+  W                   
Sbjct: 624  FPRNLIWLCWHGFPVKSIPLKLCLENLVVLDMRYSNLKHAW------------------- 664

Query: 788  XXXLELTTHYLFSKQDLPSLQILDLSHSRRLGKIVNFFGIRNLERLILKGCVSLVDICES 609
                          + L  L+ILD SHS  L    +  G+ NLERL LK C++LV++ +S
Sbjct: 665  -----------IGARGLKQLKILDFSHSYGLVSTPDLSGLPNLERLKLKSCINLVEVHKS 713

Query: 608  ICNLERLVELDLEGCKKLEKLPRNIRLLGSLETLVMSGCSXXXXXXXXXXXXXXXXXXXX 429
            I NLE+LV L+L+ CK+L KLPR I LL SLE L++SGCS                    
Sbjct: 714  IENLEKLVLLNLKDCKRLRKLPRKIVLLRSLEKLILSGCSELDKLSSELRKMESLKVLHM 773

Query: 428  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXISWSGLFKPKRNPEIINLS-LPSSLVNLDLT 252
                                           WS L + +     + L+ LP SL +L L 
Sbjct: 774  DGFKHYTAKSRQLTF----------------WSWLSRRQGMDSSLALTFLPCSLDHLSLA 817

Query: 251  NCNIFENSFPKDXXXXXXXXXXXLDGNPIEALPESIETLPNLEYLSVSSCNRLRSMIGLP 72
            +C++ +++   D           L GN I  LP++I  L  LE L + +C  L+S+  LP
Sbjct: 818  DCDLSDDTV--DLSCLSSLKCLNLSGNSISCLPKTISGLTKLESLVLDNCRSLQSLSELP 875

Query: 71   CSVRYLLASKITSLERIT 18
             S+R L A   TSLERIT
Sbjct: 876  ASLRELNAENCTSLERIT 893


>ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score =  153 bits (386), Expect = 1e-34
 Identities = 124/436 (28%), Positives = 176/436 (40%), Gaps = 5/436 (1%)
 Frame = -3

Query: 1301 KDPGKRSRLWHHEDSFNVMKGNEGTESIEGLALDLDDSVKLSFSSNYPNSLGINKVTSLV 1122
            KDPGKRSRL  HED  +V+  N+GTE++EG+  DL  S +L+                  
Sbjct: 504  KDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFDLSASKELN------------------ 545

Query: 1121 KPYFSFLSRPSEHTASRDPSGVELSIKAFEXXXXXXXXXXKHVQFTGSYEHFPRNLAWLS 942
                                   LS+ AF            ++  +  ++    NL  L 
Sbjct: 546  -----------------------LSVDAFAKMNKLRLLRFYNLHLSRDFKFPSNNLRSLH 582

Query: 941  WHEFPLYYIPTDLPLPNLVALDLHYSMLEQVWDRTMVGHXXXXXXXXXXXXXXXLELTTH 762
            WH +PL  +P++     LV L++ YS+L+Q+W+                           
Sbjct: 583  WHGYPLKSLPSNFHPEKLVELNMCYSLLKQLWE--------------------------- 615

Query: 761  YLFSKQDLPSLQILDLSHSRRLGKIVNFFGIRNLERLILKGCVSLVDICESICNLERLVE 582
                K+    L+ + LSHS+ L K  +F     L R+IL GC SLV +  SI  L+ L+ 
Sbjct: 616  ---GKKAFEKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIF 672

Query: 581  LDLEGCKKLEKLPRNIRLLGSLETLVMSGCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 402
            L+LEGC KLE LP++I  L SL+TL +SGCS                             
Sbjct: 673  LNLEGCSKLENLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELNVDGTGIKEVT 732

Query: 401  XXXXXXXXXXXXXXXXXXXXISWSGLFKPKRNPEIINLSLP-----SSLVNLDLTNCNIF 237
                                 S S      R+     L LP      SL +L+L++CN+ 
Sbjct: 733  SSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLYSLKSLNLSDCNLL 792

Query: 236  ENSFPKDXXXXXXXXXXXLDGNPIEALPESIETLPNLEYLSVSSCNRLRSMIGLPCSVRY 57
            E + P D           LD N    LP S+  L  L  L++  C  LRS+  LP S+ Y
Sbjct: 793  EGALPSDLSSLSSLENLYLDKNSFITLPASLSRLSRLRSLTLEHCKSLRSLPELPSSIEY 852

Query: 56   LLASKITSLERITFKS 9
            L A   TSLE ++  S
Sbjct: 853  LNAHSCTSLETLSCSS 868


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score =  146 bits (368), Expect = 1e-32
 Identities = 92/274 (33%), Positives = 138/274 (50%), Gaps = 5/274 (1%)
 Frame = -3

Query: 1298 DPGKRSRLWHHEDSFNVMKGNEGTESIEGLALDL-----DDSVKLSFSSNYPNSLGINKV 1134
            DPGKRSRLW  +D+  V++ N GTESI+GL L L     +   +   ++++    G   +
Sbjct: 513  DPGKRSRLWDPKDATKVLRQNTGTESIKGLILKLPTQTENKRTRKDATADHTKENGEEDL 572

Query: 1133 TSLVKPYFSFLSRPSEHTASRDPSGVELSIKAFEXXXXXXXXXXKHVQFTGSYEHFPRNL 954
            +  +    S+  +P+    +        S KAFE           +V+ +  Y+ FP+ L
Sbjct: 573  SDDLLDQKSYSKKPNTSPTN------SFSTKAFEKMVRLKLLNLNYVELSEGYKKFPKGL 626

Query: 953  AWLSWHEFPLYYIPTDLPLPNLVALDLHYSMLEQVWDRTMVGHXXXXXXXXXXXXXXXLE 774
             WL W  F L  +PTDL L  LVALD+  S L+ +W                        
Sbjct: 627  VWLCWRGFSLNALPTDLCLDKLVALDMRNSNLKYLWK----------------------- 663

Query: 773  LTTHYLFSKQDLPSLQILDLSHSRRLGKIVNFFGIRNLERLILKGCVSLVDICESICNLE 594
                     + L  L++L+LSHS  L +  NF G+  LE+L+LK C  LVD+ +SI  L+
Sbjct: 664  -------GIRFLVELKVLNLSHSHGLVRTPNFTGLPTLEKLVLKDCKDLVDVDKSIGGLD 716

Query: 593  RLVELDLEGCKKLEKLPRNIRLLGSLETLVMSGC 492
            +L+  +L+ CK L+KLP  I +L SLE L++SGC
Sbjct: 717  KLIIFNLKDCKNLKKLPVEITMLHSLEELILSGC 750



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 37/90 (41%), Positives = 46/90 (51%)
 Frame = -3

Query: 287  SLPSSLVNLDLTNCNIFENSFPKDXXXXXXXXXXXLDGNPIEALPESIETLPNLEYLSVS 108
            SLP  LV+L L +C + +N  P D           L GNP   LPESI +L  L  L + 
Sbjct: 815  SLPRFLVSLSLADCCLSDNVIPGDLSCLPSLEYLNLSGNPFRFLPESINSLGMLHSLVLD 874

Query: 107  SCNRLRSMIGLPCSVRYLLASKITSLERIT 18
             C  L+S+  LP  +  L A   TSLERIT
Sbjct: 875  RCISLKSIPELPTDLNSLKAEDCTSLERIT 904


>ref|XP_002276075.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1154

 Score =  143 bits (360), Expect = 1e-31
 Identities = 120/436 (27%), Positives = 191/436 (43%), Gaps = 6/436 (1%)
 Frame = -3

Query: 1301 KDPGKRSRLWHHEDSFNVMKGNEGTESIEGLALDLDDSVKLSFSSNYPNSLGINKVTSLV 1122
            ++PGKRSRLW HED   V+K N  TE IEG+ L+L    ++ + +    + G+N++  L+
Sbjct: 500  EEPGKRSRLWFHEDINGVLKKNTATEKIEGIFLNLSHLEEMLYFTTQALA-GMNRLR-LL 557

Query: 1121 KPYFSF-LSRPSEHTASRDPSGVELSIKAFEXXXXXXXXXXKHVQFTGSYEHFPRNLAWL 945
            K Y S  +SR  + T++ +                        V F+  ++    +L  L
Sbjct: 558  KVYNSKNISRNFKDTSNME---------------------NCKVNFSKDFKFCYHDLRCL 596

Query: 944  SWHEFPLYYIPTDLPLPNLVALDLHYSMLEQVWDRTMVGHXXXXXXXXXXXXXXXLELTT 765
             ++ + L  +P D    NLV L + YS ++Q+W    V                      
Sbjct: 597  YFYGYSLKSLPNDFNPKNLVELSMPYSRIKQLWKGIKV---------------------- 634

Query: 764  HYLFSKQDLPSLQILDLSHSRRLGKIVNFFGIRNLERLILKGCVSLVDICESICNLERLV 585
                    L +L+ +DLSHS+ L +  NF G+ NL+RL+L+GCVSL  +  S+ +L+ L+
Sbjct: 635  --------LANLKFMDLSHSKYLIETPNFRGVTNLKRLVLEGCVSLRKVHSSLGDLKNLI 686

Query: 584  ELDLEGCKKLEKLPRNIRLLGSLETLVMSGCSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 405
             L+L+ C+ L+ LP +   L SLET ++SGCS                            
Sbjct: 687  FLNLKNCQMLKSLPSSTCDLKSLETFILSGCSKFKEFPENFGSLEMLKELYADEIAIGVL 746

Query: 404  XXXXXXXXXXXXXXXXXXXXXISWSGLFKPKRNPEIIN-----LSLPSSLVNLDLTNCNI 240
                                  S   L  P+R+   I      LS   SL+ L+L+NCN+
Sbjct: 747  PSSFSFLRNLQILSFKGCKGPSSTLWLL-PRRSSNSIGSILQPLSGLRSLIRLNLSNCNL 805

Query: 239  FENSFPKDXXXXXXXXXXXLDGNPIEALPESIETLPNLEYLSVSSCNRLRSMIGLPCSVR 60
             +                 L GN    LP +I  L NL  L + +C RL+ +  LP S+ 
Sbjct: 806  SDEPNLSSLGFLSSLEELYLGGNDFVTLPSTISQLSNLTLLGLENCKRLQVLPELPSSIY 865

Query: 59   YLLASKITSLERITFK 12
            Y+ A   TSL+ ++++
Sbjct: 866  YICAENCTSLKDVSYQ 881


>emb|CAN72303.1| hypothetical protein VITISV_009715 [Vitis vinifera]
          Length = 1135

 Score =  140 bits (352), Expect = 9e-31
 Identities = 119/435 (27%), Positives = 187/435 (42%), Gaps = 6/435 (1%)
 Frame = -3

Query: 1298 DPGKRSRLWHHEDSFNVMKGNEGTESIEGLALDLDDSVKLSFSSNYPNSLGINKVTSLVK 1119
            +PGKRSRLW HED   V+K N  TE IEG+ L+L    ++ + +    +L       L+K
Sbjct: 481  EPGKRSRLWFHEDINXVLKKNTATEKIEGIFLNLSHLEEMLYFTT--QALARMNRLRLLK 538

Query: 1118 PYFSF-LSRPSEHTASRDPSGVELSIKAFEXXXXXXXXXXKHVQFTGSYEHFPRNLAWLS 942
             Y S  +SR  + T++ +                        V F+  ++    +L  L 
Sbjct: 539  VYNSKNISRNFKDTSNME---------------------NCKVNFSKDFKFCYHDLRCLY 577

Query: 941  WHEFPLYYIPTDLPLPNLVALDLHYSMLEQVWDRTMVGHXXXXXXXXXXXXXXXLELTTH 762
            ++ + L  +P D    NL+ L + YS ++Q+W    V                       
Sbjct: 578  FYGYSLKSLPNDFNPKNLIELSMPYSRIKQLWKGIXV----------------------- 614

Query: 761  YLFSKQDLPSLQILDLSHSRRLGKIVNFFGIRNLERLILKGCVSLVDICESICNLERLVE 582
                   L +L+ +DLSHS+ L +  NF G+ NL+RL+L+GCVSL  +  S+ +L+ L+ 
Sbjct: 615  -------LANLKFMDLSHSKYLIETPNFRGVTNLKRLVLEGCVSLRKVHSSLGDLKNLIF 667

Query: 581  LDLEGCKKLEKLPRNIRLLGSLETLVMSGCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 402
            L+L+ C+ L+ LP +   L SLET ++SGCS                             
Sbjct: 668  LNLKNCQMLKSLPSSTCDLKSLETFILSGCSKFKEFPENFGSLEMLKELYXDEIAIGVLP 727

Query: 401  XXXXXXXXXXXXXXXXXXXXISWSGLFKPKRNPEIIN-----LSLPSSLVNLDLTNCNIF 237
                                 S   L  P+R+   I      LS   SL+ L+L+NCN+ 
Sbjct: 728  SSFSFLRNLQILSFKGCKGPSSTLWLL-PRRSSNSIGSILQPLSGLRSLIRLNLSNCNLS 786

Query: 236  ENSFPKDXXXXXXXXXXXLDGNPIEALPESIETLPNLEYLSVSSCNRLRSMIGLPCSVRY 57
            +                 L GN    LP +I  L NL  L + +C RL+ +  LP S+ Y
Sbjct: 787  DEPNLSSLGFLSSLEELYLGGNDFVTLPSTISQLSNLTLLGLENCKRLQVLPELPSSIYY 846

Query: 56   LLASKITSLERITFK 12
            + A   TSL+ ++++
Sbjct: 847  ICAENCTSLKDVSYQ 861


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