BLASTX nr result

ID: Panax21_contig00016643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016643
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308808.1| predicted protein [Populus trichocarpa] gi|2...    80   6e-17
emb|CBI25742.3| unnamed protein product [Vitis vinifera]               78   5e-16
ref|XP_002322507.1| predicted protein [Populus trichocarpa] gi|2...    74   4e-14
ref|XP_003547286.1| PREDICTED: uncharacterized protein LOC100812...    62   3e-10
emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]    46   5e-10

>ref|XP_002308808.1| predicted protein [Populus trichocarpa] gi|222854784|gb|EEE92331.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score = 79.7 bits (195), Expect(2) = 6e-17
 Identities = 39/71 (54%), Positives = 44/71 (61%)
 Frame = -2

Query: 495 TVRPWPHVDLSDSSFEVGTAVDAWWSDGWWEGVVPGVSLSRSDKLQYFSV*LICLSFLIL 316
           T+RP P    +D  FEVG  VDAWWSDGWWEGVV GV +S SD          CL   + 
Sbjct: 465 TIRPHPQNHSTDHIFEVGAPVDAWWSDGWWEGVVSGVDISGSD----------CLQVYLP 514

Query: 315 GEGKFLTLQRK 283
           GEGKFLT+ RK
Sbjct: 515 GEGKFLTVPRK 525



 Score = 32.3 bits (72), Expect(2) = 6e-17
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 310 GQVLDSSTEGIRS*RDWIDNRWL*IKSK 227
           G+ L    + +RS RDW+DNRW+ + +K
Sbjct: 517 GKFLTVPRKNVRSSRDWVDNRWVDVMAK 544


>emb|CBI25742.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score = 77.8 bits (190), Expect(2) = 5e-16
 Identities = 36/72 (50%), Positives = 47/72 (65%)
 Frame = -2

Query: 498 LTVRPWPHVDLSDSSFEVGTAVDAWWSDGWWEGVVPGVSLSRSDKLQYFSV*LICLSFLI 319
           LT+RP+P  D ++ +FEVG AVDAWW DGWWEGVV  V +S +D LQ +          +
Sbjct: 255 LTIRPFPPEDCTEYTFEVGAAVDAWWGDGWWEGVVTRVGISGNDSLQVY----------L 304

Query: 318 LGEGKFLTLQRK 283
            GEGK LT ++K
Sbjct: 305 PGEGKLLTFEKK 316



 Score = 31.2 bits (69), Expect(2) = 5e-16
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -1

Query: 310 GQVLDSSTEGIRS*RDWIDNRWL*IKSK 227
           G++L    + +R+ RDW+ N+W+ +KSK
Sbjct: 308 GKLLTFEKKNLRTSRDWVGNKWVELKSK 335


>ref|XP_002322507.1| predicted protein [Populus trichocarpa] gi|222867137|gb|EEF04268.1|
           predicted protein [Populus trichocarpa]
          Length = 685

 Score = 74.3 bits (181), Expect(2) = 4e-14
 Identities = 34/71 (47%), Positives = 43/71 (60%)
 Frame = -2

Query: 495 TVRPWPHVDLSDSSFEVGTAVDAWWSDGWWEGVVPGVSLSRSDKLQYFSV*LICLSFLIL 316
           T+RP P    +++ FEVGT +DAWWSDGWWEG+  GV +S  D          CL   + 
Sbjct: 465 TIRPHPQNHSAENVFEVGTPIDAWWSDGWWEGIAVGVDISGGD----------CLRVYLP 514

Query: 315 GEGKFLTLQRK 283
           GEGKFL + RK
Sbjct: 515 GEGKFLAVPRK 525



 Score = 28.1 bits (61), Expect(2) = 4e-14
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 310 GQVLDSSTEGIRS*RDWIDNRWL*IKSK 227
           G+ L    +  RS RDW+DN+W+ + +K
Sbjct: 517 GKFLAVPRKYTRSSRDWVDNKWVDVMAK 544


>ref|XP_003547286.1| PREDICTED: uncharacterized protein LOC100812434 [Glycine max]
          Length = 974

 Score = 61.6 bits (148), Expect(2) = 3e-10
 Identities = 30/72 (41%), Positives = 42/72 (58%)
 Frame = -2

Query: 498 LTVRPWPHVDLSDSSFEVGTAVDAWWSDGWWEGVVPGVSLSRSDKLQYFSV*LICLSFLI 319
           LTVRP P    +  +FE+G  VDAWW DGWWEGV+  V++S    LQ ++          
Sbjct: 661 LTVRPCPPEYNTGHTFEIGAPVDAWWCDGWWEGVITAVNVSGDGILQVYTP--------- 711

Query: 318 LGEGKFLTLQRK 283
            GE +FL +++K
Sbjct: 712 -GEERFLKVEKK 722



 Score = 27.7 bits (60), Expect(2) = 3e-10
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 286 EGIRS*RDWIDNRWL*IKSK 227
           + IR  RDWI+NRW+ I+ K
Sbjct: 722 KNIRISRDWINNRWVDIQGK 741


>emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]
          Length = 1251

 Score = 46.2 bits (108), Expect(2) = 5e-10
 Identities = 24/29 (82%), Positives = 27/29 (93%), Gaps = 2/29 (6%)
 Frame = +3

Query: 105 RHRPSLAPS--QSKAARRLKAFELEQSKS 185
           RHRPSLAPS  +SKAARRLKAFE+EQS+S
Sbjct: 66  RHRPSLAPSSSKSKAARRLKAFEMEQSQS 94



 Score = 42.4 bits (98), Expect(2) = 5e-10
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +1

Query: 1   PKQNPRNPNFLSPNPQKFFTASKQTPKSPSLSTF 102
           PKQ+ +NP+F SP PQ FFTASKQTP+S S S F
Sbjct: 34  PKQSSKNPSFHSPFPQ-FFTASKQTPRS-SASAF 65


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