BLASTX nr result

ID: Panax21_contig00016642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016642
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25742.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002300373.1| predicted protein [Populus trichocarpa] gi|2...    73   4e-11
ref|XP_002531155.1| conserved hypothetical protein [Ricinus comm...    68   1e-09
ref|XP_003534738.1| PREDICTED: uncharacterized protein LOC100816...    67   3e-09
ref|XP_002327645.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09

>emb|CBI25742.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
 Frame = -1

Query: 397 GEGKFLTLQRKDIRISRDWIDNRWVDIKPKPDVLSFICSYLXXXXXXPTSSTVDKASKLG 218
           GEGK LT ++K++R SRDW+ N+WV++K KPD+L  +           T+ST+ +A   G
Sbjct: 306 GEGKLLTFEKKNLRTSRDWVGNKWVELKSKPDILHCV---------PVTASTMAEAFDSG 356

Query: 217 SSA--DREVPTNSKPKAVEEKTKELPCPSVAENVEKMSQNLKKRLRISENNE 68
           +SA  D  + T  K +AV E  K LP       + +  Q L  R R+  NNE
Sbjct: 357 ASALLDLNILTTHKVEAVGECKKVLPGSGPHSGILENVQGLNLRKRLCHNNE 408


>ref|XP_002300373.1| predicted protein [Populus trichocarpa] gi|222847631|gb|EEE85178.1|
           predicted protein [Populus trichocarpa]
          Length = 655

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
 Frame = -1

Query: 403 FTGEGKFLTLQRKDIRISRDWIDNRWVDIKPKPDVLSFICSYLXXXXXXPTSSTVDK--A 230
           F GE  FL + +KD+RISRDW+ N+W+DI+ KPD+LS I +          S  ++K   
Sbjct: 477 FPGENLFLDMHKKDVRISRDWVGNQWIDIQAKPDILSAISATTSPETKTSISLMINKDLV 536

Query: 229 SKLGSSADREVPTNSKPKAVEEKTKE 152
           S L + +  EVPT++KP  +EE+  E
Sbjct: 537 SDLVAMSCVEVPTSAKPNTIEERKPE 562


>ref|XP_002531155.1| conserved hypothetical protein [Ricinus communis]
           gi|223529268|gb|EEF31240.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
 Frame = -2

Query: 624 VGVLDEENTDGGGAEVQSKG-IDESPMFLSPVRFGFGPAVEPFDMIKHNYLQRTPKTPTA 448
           V VL  +  +G    +++   ID+SP+ LSPV           D++KH+YL RTPKTP  
Sbjct: 56  VAVLTNKKAEGDDIMIENNSVIDKSPLMLSPV-----------DLLKHSYLVRTPKTPRT 104

Query: 447 EDYDFESRLESLPMDLLVR 391
           ED + +SRLESLPMDLLV+
Sbjct: 105 EDCESDSRLESLPMDLLVK 123


>ref|XP_003534738.1| PREDICTED: uncharacterized protein LOC100816046 [Glycine max]
          Length = 718

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 41/101 (40%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
 Frame = -1

Query: 397 GEGKFLTLQRKDIRISRDWIDNRWVDIKPKPDVLSFICSYLXXXXXXPTSSTVDKASKLG 218
           GE +FL +++K+IRISRDWI+NRWVDI+ KPD    ICSYL          + + A   G
Sbjct: 534 GEERFLKVEKKNIRISRDWINNRWVDIQGKPD----ICSYLSSNARSSIRMSANSAVVDG 589

Query: 217 SSADREVPTNSKP---------KAVEEKTKELPCPSVAENV 122
           S +D      SKP         K VE +   L  P   EN+
Sbjct: 590 SMSDCSAILESKPTPSAKVEVAKKVEPELSGLEAPVNLENI 630


>ref|XP_002327645.1| predicted protein [Populus trichocarpa] gi|222836730|gb|EEE75123.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 9/72 (12%)
 Frame = -2

Query: 579 VQSKGIDESPMFLSPVRF--GFGPAVE-------PFDMIKHNYLQRTPKTPTAEDYDFES 427
           V+ + +D+SP+ LSPV       P ++       P D++K N+L RTPKTP  ED D ES
Sbjct: 71  VEDRAMDKSPLLLSPVGLCKQHHPTIDKSPLMLSPVDLLKQNHLARTPKTPRIEDCDTES 130

Query: 426 RLESLPMDLLVR 391
           RLESLPM+LLV+
Sbjct: 131 RLESLPMELLVK 142


Top