BLASTX nr result

ID: Panax21_contig00016638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016638
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305651.1| f-box family protein [Populus trichocarpa] g...   353   1e-95
ref|XP_002316664.1| f-box family protein [Populus trichocarpa] g...   350   7e-95
ref|XP_002524686.1| TRANSPORT INHIBITOR RESPONSE 1 protein, puta...   341   4e-92
ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPO...   331   5e-89
emb|CBI23303.3| unnamed protein product [Vitis vinifera]              331   5e-89

>ref|XP_002305651.1| f-box family protein [Populus trichocarpa]
           gi|222848615|gb|EEE86162.1| f-box family protein
           [Populus trichocarpa]
          Length = 579

 Score =  353 bits (906), Expect = 1e-95
 Identities = 166/184 (90%), Positives = 177/184 (96%)
 Frame = -1

Query: 554 QCSNLRRLWVLDTVGDNGLEAVGSNCPLLEELRVFPSDPFDQDIFHGVTESGFVAVSYGC 375
           QC  LRRLWVLDTVGD GLEAVGSNCPLLEELRVFP+DPFD++I HGVTE+GFVAVSYGC
Sbjct: 317 QCPRLRRLWVLDTVGDKGLEAVGSNCPLLEELRVFPADPFDEEIIHGVTEAGFVAVSYGC 376

Query: 374 RKLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMNPCQPDYLTNEPMDEAFGSVVKTC 195
           R+LHYVLYFCRQMTNAAVATIVQNCP+FTHFRLCIMNP QPDYLTNEPMDEAFG+VV+TC
Sbjct: 377 RRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIMNPGQPDYLTNEPMDEAFGAVVRTC 436

Query: 194 TKLQRLAVSGLLTDLTFEYIGEYAKNLETLSVAFAGSSDLGMQAVMEGCPKLRKLEIRDC 15
           TKLQRL+VSGLLTDLTFEYIG+YAKNLETLSVAFAGSSD GMQ V+EGCPKLRKLEIRDC
Sbjct: 437 TKLQRLSVSGLLTDLTFEYIGQYAKNLETLSVAFAGSSDRGMQCVLEGCPKLRKLEIRDC 496

Query: 14  PFGN 3
           PFGN
Sbjct: 497 PFGN 500


>ref|XP_002316664.1| f-box family protein [Populus trichocarpa]
           gi|222859729|gb|EEE97276.1| f-box family protein
           [Populus trichocarpa]
          Length = 579

 Score =  350 bits (899), Expect = 7e-95
 Identities = 163/184 (88%), Positives = 177/184 (96%)
 Frame = -1

Query: 554 QCSNLRRLWVLDTVGDNGLEAVGSNCPLLEELRVFPSDPFDQDIFHGVTESGFVAVSYGC 375
           QC  LRRLWVLDTVGD GLEAVGSNCPLLEELRVFP+DPFD+++ HGVTE+GF+AVSYGC
Sbjct: 317 QCPRLRRLWVLDTVGDKGLEAVGSNCPLLEELRVFPADPFDEEVIHGVTEAGFLAVSYGC 376

Query: 374 RKLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMNPCQPDYLTNEPMDEAFGSVVKTC 195
           R+LHYVLYFCRQMTNAAVATIVQNCP+FTHFRLCIMNP QPDYLTNEPMDEAFG+VV+TC
Sbjct: 377 RRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIMNPGQPDYLTNEPMDEAFGAVVRTC 436

Query: 194 TKLQRLAVSGLLTDLTFEYIGEYAKNLETLSVAFAGSSDLGMQAVMEGCPKLRKLEIRDC 15
           TKLQRL+VSGLLTDLTFEYIG+YAKNLETLSVAFAGSSD GMQ ++EGCPKLRKLEIRDC
Sbjct: 437 TKLQRLSVSGLLTDLTFEYIGQYAKNLETLSVAFAGSSDRGMQCMLEGCPKLRKLEIRDC 496

Query: 14  PFGN 3
           PFGN
Sbjct: 497 PFGN 500


>ref|XP_002524686.1| TRANSPORT INHIBITOR RESPONSE 1 protein, putative [Ricinus communis]
           gi|223536047|gb|EEF37705.1| TRANSPORT INHIBITOR RESPONSE
           1 protein, putative [Ricinus communis]
          Length = 589

 Score =  341 bits (875), Expect = 4e-92
 Identities = 160/183 (87%), Positives = 172/183 (93%)
 Frame = -1

Query: 551 CSNLRRLWVLDTVGDNGLEAVGSNCPLLEELRVFPSDPFDQDIFHGVTESGFVAVSYGCR 372
           C  LRRLWVLDT+ D GLE+VGSNCPLLEELRVFP+DPF+++I HGVTE+GFVAVSYGCR
Sbjct: 328 CPQLRRLWVLDTIEDKGLESVGSNCPLLEELRVFPADPFEEEIIHGVTEAGFVAVSYGCR 387

Query: 371 KLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMNPCQPDYLTNEPMDEAFGSVVKTCT 192
           +LHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMNP QPDY TN+PMDEAFG+VVKTCT
Sbjct: 388 RLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMNPRQPDYTTNKPMDEAFGAVVKTCT 447

Query: 191 KLQRLAVSGLLTDLTFEYIGEYAKNLETLSVAFAGSSDLGMQAVMEGCPKLRKLEIRDCP 12
           KLQRL+VSGLLTDLTFEYIG YAKNLETLSVAFAGSSD GMQ V+ GCPKLRKLEIRDCP
Sbjct: 448 KLQRLSVSGLLTDLTFEYIGRYAKNLETLSVAFAGSSDWGMQCVLGGCPKLRKLEIRDCP 507

Query: 11  FGN 3
           FGN
Sbjct: 508 FGN 510


>ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1 [Vitis vinifera]
          Length = 583

 Score =  331 bits (848), Expect = 5e-89
 Identities = 155/184 (84%), Positives = 171/184 (92%)
 Frame = -1

Query: 554 QCSNLRRLWVLDTVGDNGLEAVGSNCPLLEELRVFPSDPFDQDIFHGVTESGFVAVSYGC 375
           +C NL+RLWVLDTV D GLEAVG +CPLLEELRVFP+DP++QD+ HGVTE GFVAVSYGC
Sbjct: 324 RCPNLQRLWVLDTVEDKGLEAVGLSCPLLEELRVFPADPYEQDVVHGVTEMGFVAVSYGC 383

Query: 374 RKLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMNPCQPDYLTNEPMDEAFGSVVKTC 195
            +LHYVLYFCRQMTNAAVATIV+NCP+FTHFRLC+MNP +PDYLT+EPMDEAFG+VVK C
Sbjct: 384 PRLHYVLYFCRQMTNAAVATIVKNCPDFTHFRLCVMNPGEPDYLTDEPMDEAFGAVVKNC 443

Query: 194 TKLQRLAVSGLLTDLTFEYIGEYAKNLETLSVAFAGSSDLGMQAVMEGCPKLRKLEIRDC 15
           TKLQRLAVSGLLTDLTFEYIG+YAKNLETLSVAFAGSSD GMQ V+ GC KLRKLEIRDC
Sbjct: 444 TKLQRLAVSGLLTDLTFEYIGKYAKNLETLSVAFAGSSDWGMQCVLSGCSKLRKLEIRDC 503

Query: 14  PFGN 3
           PFGN
Sbjct: 504 PFGN 507


>emb|CBI23303.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score =  331 bits (848), Expect = 5e-89
 Identities = 155/184 (84%), Positives = 171/184 (92%)
 Frame = -1

Query: 554 QCSNLRRLWVLDTVGDNGLEAVGSNCPLLEELRVFPSDPFDQDIFHGVTESGFVAVSYGC 375
           +C NL+RLWVLDTV D GLEAVG +CPLLEELRVFP+DP++QD+ HGVTE GFVAVSYGC
Sbjct: 294 RCPNLQRLWVLDTVEDKGLEAVGLSCPLLEELRVFPADPYEQDVVHGVTEMGFVAVSYGC 353

Query: 374 RKLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMNPCQPDYLTNEPMDEAFGSVVKTC 195
            +LHYVLYFCRQMTNAAVATIV+NCP+FTHFRLC+MNP +PDYLT+EPMDEAFG+VVK C
Sbjct: 354 PRLHYVLYFCRQMTNAAVATIVKNCPDFTHFRLCVMNPGEPDYLTDEPMDEAFGAVVKNC 413

Query: 194 TKLQRLAVSGLLTDLTFEYIGEYAKNLETLSVAFAGSSDLGMQAVMEGCPKLRKLEIRDC 15
           TKLQRLAVSGLLTDLTFEYIG+YAKNLETLSVAFAGSSD GMQ V+ GC KLRKLEIRDC
Sbjct: 414 TKLQRLAVSGLLTDLTFEYIGKYAKNLETLSVAFAGSSDWGMQCVLSGCSKLRKLEIRDC 473

Query: 14  PFGN 3
           PFGN
Sbjct: 474 PFGN 477


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