BLASTX nr result

ID: Panax21_contig00016605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016605
         (1628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270172.1| PREDICTED: F-box/LRR-repeat protein 14 [Viti...   182   2e-43
ref|XP_003528300.1| PREDICTED: F-box/LRR-repeat protein 14-like ...   175   4e-41
ref|XP_003528299.1| PREDICTED: F-box/LRR-repeat protein 14-like ...   175   4e-41
ref|XP_004135866.1| PREDICTED: F-box/LRR-repeat protein 14-like ...   173   1e-40
gb|AFK38491.1| unknown [Medicago truncatula]                          163   1e-37

>ref|XP_002270172.1| PREDICTED: F-box/LRR-repeat protein 14 [Vitis vinifera]
            gi|297743556|emb|CBI36423.3| unnamed protein product
            [Vitis vinifera]
          Length = 578

 Score =  182 bits (462), Expect = 2e-43
 Identities = 89/113 (78%), Positives = 102/113 (90%)
 Frame = +1

Query: 1288 ITAQGMSVFSGLVNLLKLDLERCPGIHGGLVHLKGLSKLESLNINCCNCITDADMKPLAG 1467
            ITAQGMS FS LVNL+KLDLERCPGIHGGL+HLKGL+KLESLNIN C+CITDAD+KPL+G
Sbjct: 194  ITAQGMSAFSSLVNLVKLDLERCPGIHGGLIHLKGLTKLESLNINMCHCITDADLKPLSG 253

Query: 1468 LTSLKALQISSSKVTNYGVTFLKALNKLTLLNMEGCPVTAACLDSLSALTTLL 1626
            LT+LK L+IS SKVT+ GV +LK L+KL LLNMEGCPVTAACL+SLS L +LL
Sbjct: 254  LTNLKGLEISRSKVTDDGVAYLKGLHKLALLNMEGCPVTAACLESLSDLPSLL 306



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1324 VNLLKLDLERCPGIHGGLVHLKGLSKLESLNINCCNCITDADMKPLAGLTSLKALQI-SS 1500
            V+LL +DL      + GL+HLK  + L++LN+N C+ I+D  +K ++GL++L  L    +
Sbjct: 132  VSLLSVDLSGSEITNSGLIHLKDCTNLQALNLNYCDQISDHGLKHISGLSNLTTLSFRRN 191

Query: 1501 SKVTNYGVTFLKALNKLTLLNMEGCPVTAACLDSLSALTTL 1623
            + +T  G++   +L  L  L++E CP     L  L  LT L
Sbjct: 192  NAITAQGMSAFSSLVNLVKLDLERCPGIHGGLIHLKGLTKL 232



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 34/99 (34%), Positives = 61/99 (61%)
 Frame = +1

Query: 1288 ITAQGMSVFSGLVNLLKLDLERCPGIHGGLVHLKGLSKLESLNINCCNCITDADMKPLAG 1467
            I  +G++  +GL +L  L+L        GL HL GL+ LES+N++    +TD+ ++ L+ 
Sbjct: 363  ICDEGLANLTGLRHLKCLELSDTEVGSNGLRHLSGLANLESINLSF-TAVTDSGLRKLSA 421

Query: 1468 LTSLKALQISSSKVTNYGVTFLKALNKLTLLNMEGCPVT 1584
            L+SLK+L + + ++T+ G+  L +L  LT L++ G  +T
Sbjct: 422  LSSLKSLNLDARQITDAGLAALTSLTGLTHLDLFGARIT 460


>ref|XP_003528300.1| PREDICTED: F-box/LRR-repeat protein 14-like isoform 2 [Glycine max]
          Length = 529

 Score =  175 bits (443), Expect = 4e-41
 Identities = 85/112 (75%), Positives = 99/112 (88%)
 Frame = +1

Query: 1288 ITAQGMSVFSGLVNLLKLDLERCPGIHGGLVHLKGLSKLESLNINCCNCITDADMKPLAG 1467
            I+AQGMS FSGLVNL+KLDLERCPGIHGGLVHL+GL+KLESLN+  CNCITD DMKPL+ 
Sbjct: 193  ISAQGMSAFSGLVNLVKLDLERCPGIHGGLVHLRGLTKLESLNLKWCNCITDYDMKPLSE 252

Query: 1468 LTSLKALQISSSKVTNYGVTFLKALNKLTLLNMEGCPVTAACLDSLSALTTL 1623
            L SLK+L+ISSSKVT++G++FLK L KL LLN+EGC VTAACLDSL+ L  L
Sbjct: 253  LASLKSLEISSSKVTDFGISFLKGLQKLALLNLEGCLVTAACLDSLAELPAL 304



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
 Frame = +1

Query: 1288 ITAQGMSVFSGLVNLLKLDLERCPGI--HGGLVHLKGLSKLESLNINCCNCITDADMKPL 1461
            IT  G +      NL  L++  C G+    G+ ++K LS L  LN++  + +TD  ++ +
Sbjct: 410  ITDFGTNYLKKFKNLRSLEI--CGGVLTDAGVKNIKELSSLVCLNLSQNSNLTDKTLELI 467

Query: 1462 AGLTSLKALQISSSKVTNYGVTFLKALNKLTLLNMEGCPVTAACLDSLSAL 1614
            +GLT L +L +S+S++TN G+  LK L  L  L +E C VTA  +  L ++
Sbjct: 468  SGLTGLVSLNVSNSRITNAGLQHLKTLKNLRSLTLESCKVTANDIKKLKSI 518


>ref|XP_003528299.1| PREDICTED: F-box/LRR-repeat protein 14-like isoform 1 [Glycine max]
          Length = 577

 Score =  175 bits (443), Expect = 4e-41
 Identities = 85/112 (75%), Positives = 99/112 (88%)
 Frame = +1

Query: 1288 ITAQGMSVFSGLVNLLKLDLERCPGIHGGLVHLKGLSKLESLNINCCNCITDADMKPLAG 1467
            I+AQGMS FSGLVNL+KLDLERCPGIHGGLVHL+GL+KLESLN+  CNCITD DMKPL+ 
Sbjct: 193  ISAQGMSAFSGLVNLVKLDLERCPGIHGGLVHLRGLTKLESLNLKWCNCITDYDMKPLSE 252

Query: 1468 LTSLKALQISSSKVTNYGVTFLKALNKLTLLNMEGCPVTAACLDSLSALTTL 1623
            L SLK+L+ISSSKVT++G++FLK L KL LLN+EGC VTAACLDSL+ L  L
Sbjct: 253  LASLKSLEISSSKVTDFGISFLKGLQKLALLNLEGCLVTAACLDSLAELPAL 304



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
 Frame = +1

Query: 1288 ITAQGMSVFSGLVNLLKLDLERCPGI--HGGLVHLKGLSKLESLNINCCNCITDADMKPL 1461
            IT  G +      NL  L++  C G+    G+ ++K LS L  LN++  + +TD  ++ +
Sbjct: 458  ITDFGTNYLKKFKNLRSLEI--CGGVLTDAGVKNIKELSSLVCLNLSQNSNLTDKTLELI 515

Query: 1462 AGLTSLKALQISSSKVTNYGVTFLKALNKLTLLNMEGCPVTAACLDSLSAL 1614
            +GLT L +L +S+S++TN G+  LK L  L  L +E C VTA  +  L ++
Sbjct: 516  SGLTGLVSLNVSNSRITNAGLQHLKTLKNLRSLTLESCKVTANDIKKLKSI 566


>ref|XP_004135866.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
            gi|449509305|ref|XP_004163550.1| PREDICTED:
            F-box/LRR-repeat protein 14-like [Cucumis sativus]
          Length = 578

 Score =  173 bits (438), Expect = 1e-40
 Identities = 84/112 (75%), Positives = 100/112 (89%)
 Frame = +1

Query: 1288 ITAQGMSVFSGLVNLLKLDLERCPGIHGGLVHLKGLSKLESLNINCCNCITDADMKPLAG 1467
            ITAQGMSVF+ LVNL++LDLE+CPGIHGGLVHL+GL KLESLNI  CNCITD+D+KPL+G
Sbjct: 194  ITAQGMSVFAHLVNLIRLDLEKCPGIHGGLVHLQGLRKLESLNIKWCNCITDSDIKPLSG 253

Query: 1468 LTSLKALQISSSKVTNYGVTFLKALNKLTLLNMEGCPVTAACLDSLSALTTL 1623
            LT+LK LQIS SKVT+ G+ +LK L+KL+LLN+EGCPVTAACL +LSAL  L
Sbjct: 254  LTNLKGLQISCSKVTDAGIAYLKGLHKLSLLNLEGCPVTAACLYTLSALGAL 305



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
 Frame = +1

Query: 1288 ITAQGMSVFSGLVNLLKLDLERCPG--IHGGLVHLKGLSKLESLNINCCNCITDADMKPL 1461
            IT  G +      NL  L++  C G     G+ ++K LS L  LN++    +TD  ++ +
Sbjct: 459  ITDSGTNYLRNFKNLQSLEI--CGGGLTDAGVKNIKDLSSLMVLNLSQNGNLTDKSLELI 516

Query: 1462 AGLTSLKALQISSSKVTNYGVTFLKALNKLTLLNMEGCPVTAACLDSLSA 1611
            +GLT L +L IS+S++T+ G+  LK L  L  L +E C V+A+ +  L +
Sbjct: 517  SGLTGLVSLNISNSRITSAGLRHLKTLKNLKQLTLEACRVSASDIKKLQS 566



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 38/112 (33%), Positives = 58/112 (51%)
 Frame = +1

Query: 1288 ITAQGMSVFSGLVNLLKLDLERCPGIHGGLVHLKGLSKLESLNINCCNCITDADMKPLAG 1467
            +T  G++   GL  L  L+LE CP     L  L  L  L+ LN++ C+ ITD   +  +G
Sbjct: 267  VTDAGIAYLKGLHKLSLLNLEGCPVTAACLYTLSALGALQYLNLSRCH-ITDDGSEQFSG 325

Query: 1468 LTSLKALQISSSKVTNYGVTFLKALNKLTLLNMEGCPVTAACLDSLSALTTL 1623
            L +LK L +  + +T+  +  LK L  L  LN++ C +    L +L AL  L
Sbjct: 326  LGALKILNLGFNDITDECLVHLKGLTNLESLNLDSCRIEDDGLVNLKALHRL 377


>gb|AFK38491.1| unknown [Medicago truncatula]
          Length = 577

 Score =  163 bits (413), Expect = 1e-37
 Identities = 79/112 (70%), Positives = 96/112 (85%)
 Frame = +1

Query: 1288 ITAQGMSVFSGLVNLLKLDLERCPGIHGGLVHLKGLSKLESLNINCCNCITDADMKPLAG 1467
            I+AQGMS FS LVNL+KLDLERCPGIHGG VHL+GL+KLESLN+  CNCITD+D+KPL+ 
Sbjct: 193  ISAQGMSAFSRLVNLVKLDLERCPGIHGGTVHLQGLTKLESLNMKWCNCITDSDIKPLSE 252

Query: 1468 LTSLKALQISSSKVTNYGVTFLKALNKLTLLNMEGCPVTAACLDSLSALTTL 1623
            L SL +L+IS SKVT++G++FL+ L KL LLN+EGC VT+ACLDSLS L  L
Sbjct: 253  LASLTSLEISCSKVTDFGISFLRGLQKLALLNLEGCLVTSACLDSLSELPAL 304



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
 Frame = +1

Query: 1288 ITAQGMSVFSGLVNLLKLDL------ERCPGIHGGLVHLKGLSKLESLNINCCNCITDAD 1449
            I+ +G   FS L  L  L+L      +RC      L H+KGL+KLESLN++ C  I D  
Sbjct: 314  ISGRGCERFSRLEKLKVLNLGFNDIGDRC------LAHMKGLTKLESLNLDSCK-IGDEG 366

Query: 1450 MKPLAGLTSLKALQISSSKVTNYGVTFLKALNKLTLLNMEGCPVTAACLDSLSALTTL 1623
            ++ LAG   L  L++S ++V N+G+  L  L+ L  +N+    V+ + L  L  L++L
Sbjct: 367  LENLAGHKQLICLELSDTEVGNHGLEHLSGLSSLEKINLSFTVVSDSGLRKLCGLSSL 424


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