BLASTX nr result

ID: Panax21_contig00016582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016582
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26124.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002314473.1| hypothetical protein POPTRDRAFT_229741 [Popu...   142   3e-32
ref|XP_004159854.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   139   2e-31
ref|XP_004134469.1| PREDICTED: uncharacterized protein LOC101206...   139   2e-31
ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|35551...   138   4e-31

>emb|CBI26124.3| unnamed protein product [Vitis vinifera]
          Length = 2266

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/77 (88%), Positives = 74/77 (96%)
 Frame = -1

Query: 231  LDVMEDYLYWKQYKYLRLDGHTSEGD*GSLIDQFNKPGSPYFIFLLSIRAGGVGVNLQAA 52
            LDVME+YL+WKQY+YLRLDGHTS GD G+LI+QFN+P SPYFIFLLSIRAGGVGVNLQAA
Sbjct: 1397 LDVMEEYLHWKQYRYLRLDGHTSGGDRGALIEQFNQPDSPYFIFLLSIRAGGVGVNLQAA 1456

Query: 51   DTVIIFDTDWNPQVDLQ 1
            DTVIIFDTDWNPQVDLQ
Sbjct: 1457 DTVIIFDTDWNPQVDLQ 1473


>ref|XP_002314473.1| hypothetical protein POPTRDRAFT_229741 [Populus trichocarpa]
           gi|222863513|gb|EEF00644.1| hypothetical protein
           POPTRDRAFT_229741 [Populus trichocarpa]
          Length = 127

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/77 (88%), Positives = 72/77 (93%)
 Frame = -1

Query: 231 LDVMEDYLYWKQYKYLRLDGHTSEGD*GSLIDQFNKPGSPYFIFLLSIRAGGVGVNLQAA 52
           LDVME+YL WKQY+YLRLDGHTS GD GSLID+FN+  SPYFIFLLSIRAGGVGVNLQAA
Sbjct: 30  LDVMEEYLTWKQYRYLRLDGHTSGGDRGSLIDRFNQQDSPYFIFLLSIRAGGVGVNLQAA 89

Query: 51  DTVIIFDTDWNPQVDLQ 1
           DTVIIFDTDWNPQVDLQ
Sbjct: 90  DTVIIFDTDWNPQVDLQ 106


>ref|XP_004159854.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101206586, partial
            [Cucumis sativus]
          Length = 2108

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/77 (85%), Positives = 71/77 (92%)
 Frame = -1

Query: 231  LDVMEDYLYWKQYKYLRLDGHTSEGD*GSLIDQFNKPGSPYFIFLLSIRAGGVGVNLQAA 52
            LDVME+YL WKQY+YLRLDGHTS GD G+LI+ FN+  SPYFIFLLSIRAGGVGVNLQAA
Sbjct: 1296 LDVMEEYLQWKQYRYLRLDGHTSGGDRGALIELFNRQNSPYFIFLLSIRAGGVGVNLQAA 1355

Query: 51   DTVIIFDTDWNPQVDLQ 1
            DTVIIFDTDWNPQVDLQ
Sbjct: 1356 DTVIIFDTDWNPQVDLQ 1372


>ref|XP_004134469.1| PREDICTED: uncharacterized protein LOC101206586, partial [Cucumis
            sativus]
          Length = 2086

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/77 (85%), Positives = 71/77 (92%)
 Frame = -1

Query: 231  LDVMEDYLYWKQYKYLRLDGHTSEGD*GSLIDQFNKPGSPYFIFLLSIRAGGVGVNLQAA 52
            LDVME+YL WKQY+YLRLDGHTS GD G+LI+ FN+  SPYFIFLLSIRAGGVGVNLQAA
Sbjct: 1297 LDVMEEYLQWKQYRYLRLDGHTSGGDRGALIELFNRQNSPYFIFLLSIRAGGVGVNLQAA 1356

Query: 51   DTVIIFDTDWNPQVDLQ 1
            DTVIIFDTDWNPQVDLQ
Sbjct: 1357 DTVIIFDTDWNPQVDLQ 1373


>ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|355510630|gb|AES91772.1|
            Helicase swr1 [Medicago truncatula]
          Length = 3310

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/77 (87%), Positives = 71/77 (92%)
 Frame = -1

Query: 231  LDVMEDYLYWKQYKYLRLDGHTSEGD*GSLIDQFNKPGSPYFIFLLSIRAGGVGVNLQAA 52
            LDVME+YL  KQY+YLRLDGHTS GD G+LID FNKP SPYFIFLLSIRAGGVGVNLQAA
Sbjct: 1353 LDVMEEYLTSKQYRYLRLDGHTSGGDRGALIDLFNKPDSPYFIFLLSIRAGGVGVNLQAA 1412

Query: 51   DTVIIFDTDWNPQVDLQ 1
            DTVI+FDTDWNPQVDLQ
Sbjct: 1413 DTVILFDTDWNPQVDLQ 1429


Top