BLASTX nr result

ID: Panax21_contig00016562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016562
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23729.3| unnamed protein product [Vitis vinifera]              260   2e-67
ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266...   260   2e-67
ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|2...   250   2e-64
gb|AAX53097.1| DNA mismatch repair protein [Solanum lycopersicum]     250   3e-64
ref|XP_002528340.1| ATP binding protein, putative [Ricinus commu...   249   6e-64

>emb|CBI23729.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  260 bits (664), Expect = 2e-67
 Identities = 132/202 (65%), Positives = 155/202 (76%), Gaps = 3/202 (1%)
 Frame = +1

Query: 157 MYWVTAKSVVVSVPRWRTVAHLLRRPLHSRSVTSSRPSLIVQCNLIRSIKERXXXXXXXX 336
           MYW++ K+VVVS PR+ ++A LLR P    +   S   L+ Q    R + ER        
Sbjct: 1   MYWLSTKNVVVSFPRFYSLALLLRSPACKYTSFRSSTLLLQQFEKSRCLNERRVLKGAGR 60

Query: 337 XXXXX-NVGSSLEEK--SNIMWWNERMQMCRKPSSIQLITRLAYSNLLGVDVNLKNGSLK 507
                  + + L+EK  S+IMWW ERMQMC+KPS++ L+ RL YSNLLGVD NLKNG+LK
Sbjct: 61  MTKNVIGLQNELDEKDLSHIMWWKERMQMCKKPSTVHLVKRLIYSNLLGVDPNLKNGNLK 120

Query: 508 EGTLNWEMLQFKSRFPREILLCRVGEFYEAIGIDACILVEYAGLNPFGGLRSNSIPRAGC 687
           EGTLNWEMLQFKS+FPRE+LLCRVG+FYEAIGIDACILVEYAGLNPFGGLRS+SIPRAGC
Sbjct: 121 EGTLNWEMLQFKSKFPREVLLCRVGDFYEAIGIDACILVEYAGLNPFGGLRSDSIPRAGC 180

Query: 688 PAMNLRQTLDDLTRNGYSVCIV 753
           P MNLRQTLDDLTR+GYSVCIV
Sbjct: 181 PVMNLRQTLDDLTRSGYSVCIV 202


>ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266612 [Vitis vinifera]
          Length = 1144

 Score =  260 bits (664), Expect = 2e-67
 Identities = 132/202 (65%), Positives = 155/202 (76%), Gaps = 3/202 (1%)
 Frame = +1

Query: 157 MYWVTAKSVVVSVPRWRTVAHLLRRPLHSRSVTSSRPSLIVQCNLIRSIKERXXXXXXXX 336
           MYW++ K+VVVS PR+ ++A LLR P    +   S   L+ Q    R + ER        
Sbjct: 1   MYWLSTKNVVVSFPRFYSLALLLRSPACKYTSFRSSTLLLQQFEKSRCLNERRVLKGAGR 60

Query: 337 XXXXX-NVGSSLEEK--SNIMWWNERMQMCRKPSSIQLITRLAYSNLLGVDVNLKNGSLK 507
                  + + L+EK  S+IMWW ERMQMC+KPS++ L+ RL YSNLLGVD NLKNG+LK
Sbjct: 61  MTKNVIGLQNELDEKDLSHIMWWKERMQMCKKPSTVHLVKRLIYSNLLGVDPNLKNGNLK 120

Query: 508 EGTLNWEMLQFKSRFPREILLCRVGEFYEAIGIDACILVEYAGLNPFGGLRSNSIPRAGC 687
           EGTLNWEMLQFKS+FPRE+LLCRVG+FYEAIGIDACILVEYAGLNPFGGLRS+SIPRAGC
Sbjct: 121 EGTLNWEMLQFKSKFPREVLLCRVGDFYEAIGIDACILVEYAGLNPFGGLRSDSIPRAGC 180

Query: 688 PAMNLRQTLDDLTRNGYSVCIV 753
           P MNLRQTLDDLTR+GYSVCIV
Sbjct: 181 PVMNLRQTLDDLTRSGYSVCIV 202


>ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|222863550|gb|EEF00681.1|
           predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  250 bits (639), Expect = 2e-64
 Identities = 123/202 (60%), Positives = 148/202 (73%), Gaps = 3/202 (1%)
 Frame = +1

Query: 157 MYWVTAKSVVVSVPRWRTVAHLLRRPLHSRSVTSSRPSL---IVQCNLIRSIKERXXXXX 327
           MYW+  ++ VVS+P+WR+ A LLR P    S+  S P L   I Q   I   K       
Sbjct: 1   MYWLATRNAVVSLPKWRSFALLLRAPFKCSSLGLSPPPLYSRIGQAQPIYCFKNPKGTAR 60

Query: 328 XXXXXXXXNVGSSLEEKSNIMWWNERMQMCRKPSSIQLITRLAYSNLLGVDVNLKNGSLK 507
                   N     ++ S+I+WW E +Q C+KPS++ L+ RL YSNLLG+D +LKNGSLK
Sbjct: 61  NSKKSKASNSVLDDKDLSHIIWWKENLQRCKKPSTVNLVKRLMYSNLLGLDASLKNGSLK 120

Query: 508 EGTLNWEMLQFKSRFPREILLCRVGEFYEAIGIDACILVEYAGLNPFGGLRSNSIPRAGC 687
           EG LNWE+LQFKS+FPRE+LLCRVG+FYEAIGIDACILVEYAGLNPFGGLRS+S+PRAGC
Sbjct: 121 EGNLNWEILQFKSKFPREVLLCRVGDFYEAIGIDACILVEYAGLNPFGGLRSDSVPRAGC 180

Query: 688 PAMNLRQTLDDLTRNGYSVCIV 753
           P +NLRQTLDDLTRNGYSVCIV
Sbjct: 181 PVVNLRQTLDDLTRNGYSVCIV 202


>gb|AAX53097.1| DNA mismatch repair protein [Solanum lycopersicum]
          Length = 1124

 Score =  250 bits (638), Expect = 3e-64
 Identities = 127/199 (63%), Positives = 149/199 (74%)
 Frame = +1

Query: 157 MYWVTAKSVVVSVPRWRTVAHLLRRPLHSRSVTSSRPSLIVQCNLIRSIKERXXXXXXXX 336
           MYWVTAK+VVVSVPRWR+++  LR PL  R ++ S  +L  +   IR +KER        
Sbjct: 1   MYWVTAKNVVVSVPRWRSLSLFLRPPLRRRFLSFSPHTLCRE--QIRCVKERKFFATTAK 58

Query: 337 XXXXXNVGSSLEEKSNIMWWNERMQMCRKPSSIQLITRLAYSNLLGVDVNLKNGSLKEGT 516
                      ++  NIMWW ERM+  RKPSS  L  RL Y NLLGVD +L+NGSLKEGT
Sbjct: 59  KLKQPKSIPEEKDYVNIMWWKERMEFLRKPSSALLAKRLTYCNLLGVDPSLRNGSLKEGT 118

Query: 517 LNWEMLQFKSRFPREILLCRVGEFYEAIGIDACILVEYAGLNPFGGLRSNSIPRAGCPAM 696
           LN EMLQFKS+FPRE+LLCRVG+FYEAIG DACILVEYAGLNPFGGL S+SIP+AGCP +
Sbjct: 119 LNSEMLQFKSKFPREVLLCRVGDFYEAIGFDACILVEYAGLNPFGGLHSDSIPKAGCPVV 178

Query: 697 NLRQTLDDLTRNGYSVCIV 753
           NLRQTLDDLTRNG+SVC+V
Sbjct: 179 NLRQTLDDLTRNGFSVCVV 197


>ref|XP_002528340.1| ATP binding protein, putative [Ricinus communis]
           gi|223532208|gb|EEF34012.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 937

 Score =  249 bits (635), Expect = 6e-64
 Identities = 118/205 (57%), Positives = 153/205 (74%), Gaps = 6/205 (2%)
 Frame = +1

Query: 157 MYWVTAKSVVVSVPRWRTVAHLLRRPLHSRSVTSSRPSLIVQCNLIRSI---KERXXXXX 327
           MYW+  ++ VVS+P+WR+    LR P  ++ ++ SR  L++    +  I   K+      
Sbjct: 1   MYWLATRNAVVSLPKWRSFTLFLRSPAATKFISFSRSPLLLNSRNVERINCLKDGKILKG 60

Query: 328 XXXXXXXXNVGSSL---EEKSNIMWWNERMQMCRKPSSIQLITRLAYSNLLGVDVNLKNG 498
                      +++   ++ S+I+WW ER+  CRKPS++QL+ RL YSNLLG++V LKNG
Sbjct: 61  VTRGSKKLKASNNILGDKDLSHIIWWKERLHQCRKPSTVQLVKRLMYSNLLGLNVELKNG 120

Query: 499 SLKEGTLNWEMLQFKSRFPREILLCRVGEFYEAIGIDACILVEYAGLNPFGGLRSNSIPR 678
           SLK+G LNWEMLQFKS+FPRE+LLCRVG+FYEAIGIDACILVEYAGLNPFGGLR++S+PR
Sbjct: 121 SLKDGNLNWEMLQFKSKFPREVLLCRVGDFYEAIGIDACILVEYAGLNPFGGLRTDSVPR 180

Query: 679 AGCPAMNLRQTLDDLTRNGYSVCIV 753
           AGCP +NLRQTLDDLTRNGYSVCIV
Sbjct: 181 AGCPVVNLRQTLDDLTRNGYSVCIV 205


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